Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe10g1947 ATGGACAAGCGAAGAGTGGAGAAGCAGCAACATTCTCAGGCTCATCTTCTTCTCCGTCACCTCCATAGCCGCCGGCGACTGAGCTCTAAACCGACGAACATGGCCACCACCGGAGCCACGCTGCTTCTTCTCTCACTCTCCGTCGTCGTCCTCCTCCTCCCTGTTTCCGCCGCCGGCGAAACCTCATCCTTCTTCAACAACCGCAAGATATCCTCCGTCGGAACTTCCTCTTCCACTTCCAACTCCTCCACCTACGCCGTCATCTTCGACGCCGGAAGCTCCGGCAGCCGCGTTCACGTCTTCCAGTTCGATCGAAACCTGGATCTCCTCTTCATCGGTTCGGACATTGAGGTTTTCTCACAGATAAAGCCAGGGCTGAGTTCATACGCCGAGGATCCTCAGAAAGCCGCGGATTCTCTGATTCCTTTACTTGAAAAAGCAGAAATCGCAGTTCCTCAAAAACTGCAATCCGTAACGCCGATTCGCCTCGGGGCGACGGCAGGGCTTAGGTTTCTGGAAGGCGATAGATCTGAGAGGATTTTGGAAGCGGTTAGGGTTCTTCTGAAAACGAAGAGCGGATTCAATTACGAAGCTGATTCGGTTTCGATTCTTGATGGAAATCAAGAAGGTTCATATCAATGGATGACAATAAATTATTTGCTGGAGAATTTGGGCAAACGATATTCGAATACGGTGGGAGTAATTGATCTCGGAGGTGGCTCTGTTCAAATGGCATATGCAATTTCTGATGAAGATGCAGCAAAGGCACCCATTTCTTCCGATGAAAACTCTAAATTTCTTCAAAATTTTTATCTCAAGGGTGCAAATTATAACCTCTACGTTCACAGTTATTTGCGTTACGGTTTACAAGCTGCCCGAGTAGAAATTTTGAAGGTGACCAAAGACCTTGGCAACCCCTGCGTTTTACCTGGTTATGAAGGTACGTACACATATGGCGGAGAGGAATACAAAGCATCAGCCCCTCGATCAGGGTCAAGCTTCGCTCGTTGCCGGAGGGTAATTTTAGAGGCACTCAAAATCAACAAATCATGCGGCTACAATGAGTGCAGTTTTGATGGTATATGGAGTGGTGGTGGAGGAGCCGGTGTGAAGAATCTCTATGTTGCTTCCTTTTTCTTTGACAAGGCAGCTCAGGCGGGTTTCATTGATTCCAATGAACCAGACGCGGTAGTGAAGCCCATTGATTTCAAGAGAGCAGCAAGGATTGCTTGTCAAACTAAATTTGTTGATGCAAAGTCCAAATACCCTAATGTTTACTCAAGTGACTTGCAATTTGTGTGCATGGATCTCGTTTACGAGTACGCACTTCTTGTCGATGGATTCGGTATTAATTCTAGAAAGAATATCACATTGGTGAAGCAAGTGGCATATCATGGTTCTCTAGCAGAGGCAGCATGGCCATTGGGTAATGCTGTAGCAGTCATCTCATCATCCAAGTACTCAACTGCAAATTATTGA 1479 46.99 MDKRRVEKQQHSQAHLLLRHLHSRRRLSSKPTNMATTGATLLLLSLSVVVLLLPVSAAGETSSFFNNRKISSVGTSSSTSNSSTYAVIFDAGSSGSRVHVFQFDRNLDLLFIGSDIEVFSQIKPGLSSYAEDPQKAADSLIPLLEKAEIAVPQKLQSVTPIRLGATAGLRFLEGDRSERILEAVRVLLKTKSGFNYEADSVSILDGNQEGSYQWMTINYLLENLGKRYSNTVGVIDLGGGSVQMAYAISDEDAAKAPISSDENSKFLQNFYLKGANYNLYVHSYLRYGLQAARVEILKVTKDLGNPCVLPGYEGTYTYGGEEYKASAPRSGSSFARCRRVILEALKINKSCGYNECSFDGIWSGGGGAGVKNLYVASFFFDKAAQAGFIDSNEPDAVVKPIDFKRAARIACQTKFVDAKSKYPNVYSSDLQFVCMDLVYEYALLVDGFGINSRKNITLVKQVAYHGSLAEAAWPLGNAVAVISSSKYSTANY 492
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 56369630 56375972 - Hsped.10g19470.1 Hepe10g1947 582494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe10g1947 492 Pfam GDA1/CD39 (nucleoside phosphatase) family 79 487 IPR000407 GO:0016787(InterPro)
Hepe10g1947 492 FunFam Apyrase 1 205 463 - -
Hepe10g1947 492 Gene3D - 85 478 - -
Hepe10g1947 492 CDD NBD_sugar-kinase_HSP70_actin 87 246 - -
Hepe10g1947 492 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 41 482 IPR000407 GO:0016787(InterPro)
Hepe10g1947 492 Gene3D Exopolyphosphatase. Domain 2 205 463 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe04g1123 Hepe-Chr4:66198385 Hepe10g1947 Hepe-Chr10:56369630 2.07e-172 dispersed
Hepe04g1124 Hepe-Chr4:66216309 Hepe10g1947 Hepe-Chr10:56369630 6.77e-176 dispersed
Hepe10g1947 Hepe-Chr10:56369630 Hepe04g0637 Hepe-Chr4:59527584 5.07e-174 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe10g1947 K14641 - mdm:103428652 517.309