Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe10g1966 | ATGCTTGGCGACTCCACTACTTCCGTCTTGGGTGGCGGTGGCGGCGGCGGAGGGGAAGTCGCCGTGCCGGAGAAGACTCACCGCCAGGATGGGCTGATCGGCGAGGCGGAGGAGAATAATAACAATTCTGGTGAAGATGAGAGAGGGAGAAGTGGCGGAGGAGACGACGGCGACCGGAGCTTCGGCGGAAACCGATGGCCGAGACAAGAGACTTTGGCCCTCTTGAAAATACGCTCAGAAATGGACGTTGCTTTCCGAGATGCAAGCGTTAAAGGCCCTTTGTGGGAACAAGTTTCCAGGAAATTAGGGGAGCTTGGGTATCATCGAAGTGCAAAGAAATGCAAGGAGAAATTTGAGAATGTTTACAAATATCACAAAAGAACCAAAGAAGTTCGAAGTGGGAAACCGGATAGCAAAACTTATAAGTTTTTTGAACAATTAGAAGCTCTTGAAAATCACCCTCCTCTTAATTTCCACTCCCATTTGTCATCTAAGCCACCTCCTCCGCCGCCTCCGGGAATGGCGGCTCCGCCACCACCAACCACCGTCATTTCTCACATTCCTTCAACTGTTCCATCGACCACCACCGCCGTACCCCACTTGATGAACATTTCATTCTCTCAACCAATAAACCCCACAATTCACCTCCAATCCCCGCCCCCTCCTGCTCCCGCTCCCGCTCCGTTGCCATCAAATAACCCTACTATCTTAACTCCCGCCACCGCCGCACCTTTTCAAACCAGCATCCCTTTGGCGGCGGCAACCGTGGCAGGGTTTCAGAGCATTGAAGCGGATCTTATCTCGAACTCGACGTCTGATGATGTCGATTCGTCGACATCATCAGATGAGGCATCGAGGCGAAGGAAGAGGAAGAGGAAATGGAAGGACTTTTTTGAGAGATTAATGAAAGAAGTGATTCAAAAGCAAGAGGAAATGCAAAAGAGATTCTTGGAAGCGATTGAGAAGAGGGAGCTAGAGAGAGTTGTGAGAGAAGAAGCTTGGAGGATGCAAGAAATGGCCAAAATCAATAGAGAAAGAGAGATTTTAGCTCAAGAAAGATCAATGGCGGCTGCTAAAGACGCCGCCATTACATCCTTCCTTCACAAAATAACAGAATCCCACCACAACAACAATAACGACAATGACAACCCGTCACAACCGTCTCCGTCGCCAATGCCAATGCCAACGCCACCGCAACCGCAACAACAACCAATACAGACGTCAAATCCAACATTACCGGTCGCGCCCACGCCCCCGCCCCCGCCACCACAAGCTTCCACATTGCAAATTGTTCTTCCAAATTCCACCCCACAAAAATTGGTGAACAATAATGAATTGTTGCAAATGGAGATTATGAAAATGGATCATAATGGTGGGGAGAGTTATAGTATTAGCCCAGCTGCAAGCTCATCAAGATGGCCAAAAGTGGAAGTTGAAGCACTTATCAAATTGAGAACAAATCTTGAAACCAAATATCAAGAGAATGGGCCAAAAGGGCCATTGTGGGAAGAGATATCATCAGCCATGAAGAAAATTGGGTACAATAGAAGTTCAAAGAGGTGCAAAGAGAAGTGGGAGAACATAAACAAGTACTTCAAGAAAGTGAAGGAGAGTAAAAAATCAAGGCCTGAGGATTCCAAGACTTGCCCTTATTTCCACCAGCTTGATGCTTTGTATAAGGTGAAGAGCAACAACACCAACAACGGCAACAAGATCGATAACATCGTAATCGGATCTTCGACGCCGATTTTTCCGCATCACCAGCAGCCGTTGATGGTTCGGCCCGAGCAACAATGGCCTCCGCAGCAAGAGATAGGTCGGCCCGACTCGGGCAATGAAGATATGGAGAGCGAACCGATGGATCGGGACGATAACGATGACGACGAAGACGAGGAGGAAGAGGACGAGGGTGGTGGGAACTATGAGATTGTGGCAAGCAAACCGGCTTCAGTGAGTGCTGCAGAGTGA | 1968 | 48.68 | MLGDSTTSVLGGGGGGGGEVAVPEKTHRQDGLIGEAEENNNNSGEDERGRSGGGDDGDRSFGGNRWPRQETLALLKIRSEMDVAFRDASVKGPLWEQVSRKLGELGYHRSAKKCKEKFENVYKYHKRTKEVRSGKPDSKTYKFFEQLEALENHPPLNFHSHLSSKPPPPPPPGMAAPPPPTTVISHIPSTVPSTTTAVPHLMNISFSQPINPTIHLQSPPPPAPAPAPLPSNNPTILTPATAAPFQTSIPLAAATVAGFQSIEADLISNSTSDDVDSSTSSDEASRRRKRKRKWKDFFERLMKEVIQKQEEMQKRFLEAIEKRELERVVREEAWRMQEMAKINREREILAQERSMAAAKDAAITSFLHKITESHHNNNNDNDNPSQPSPSPMPMPTPPQPQQQPIQTSNPTLPVAPTPPPPPPQASTLQIVLPNSTPQKLVNNNELLQMEIMKMDHNGGESYSISPAASSSRWPKVEVEALIKLRTNLETKYQENGPKGPLWEEISSAMKKIGYNRSSKRCKEKWENINKYFKKVKESKKSRPEDSKTCPYFHQLDALYKVKSNNTNNGNKIDNIVIGSSTPIFPHHQQPLMVRPEQQWPPQQEIGRPDSGNEDMESEPMDRDDNDDDEDEEEEDEGGGNYEIVASKPASVSAAE | 655 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 56627531 | 56630497 | + | Hsped.10g19660.1 | Hepe10g1966 | 582513 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe10g1966 | 655 | MobiDBLite | consensus disorder prediction | 161 | 178 | - | - | |
Hepe10g1966 | 655 | Coils | Coil | 295 | 315 | - | - | |
Hepe10g1966 | 655 | CDD | GT1 | 64 | 129 | - | - | |
Hepe10g1966 | 655 | SMART | sant | 469 | 531 | IPR001005 | - | |
Hepe10g1966 | 655 | SMART | sant | 62 | 124 | IPR001005 | - | |
Hepe10g1966 | 655 | MobiDBLite | consensus disorder prediction | 155 | 178 | - | - | |
Hepe10g1966 | 655 | MobiDBLite | consensus disorder prediction | 269 | 291 | - | - | |
Hepe10g1966 | 655 | FunFam | Trihelix transcription factor GT-2 | 473 | 534 | - | - | |
Hepe10g1966 | 655 | MobiDBLite | consensus disorder prediction | 1 | 66 | - | - | |
Hepe10g1966 | 655 | MobiDBLite | consensus disorder prediction | 596 | 655 | - | - | |
Hepe10g1966 | 655 | PANTHER | FI21293P1 | 39 | 624 | - | - | |
Hepe10g1966 | 655 | MobiDBLite | consensus disorder prediction | 386 | 404 | - | - | |
Hepe10g1966 | 655 | MobiDBLite | consensus disorder prediction | 411 | 427 | - | - | |
Hepe10g1966 | 655 | Gene3D | - | 473 | 534 | - | - | |
Hepe10g1966 | 655 | Gene3D | - | 66 | 127 | - | - | |
Hepe10g1966 | 655 | MobiDBLite | consensus disorder prediction | 41 | 55 | - | - | |
Hepe10g1966 | 655 | FunFam | Trihelix transcription factor GT-2 | 66 | 127 | - | - | |
Hepe10g1966 | 655 | MobiDBLite | consensus disorder prediction | 372 | 429 | - | - | |
Hepe10g1966 | 655 | MobiDBLite | consensus disorder prediction | 616 | 639 | - | - | |
Hepe10g1966 | 655 | CDD | GT1 | 471 | 536 | - | - | |
Hepe10g1966 | 655 | ProSiteProfiles | Myb-like domain profile. | 465 | 529 | IPR001005 | - | |
Hepe10g1966 | 655 | ProSiteProfiles | Myb-like domain profile. | 64 | 122 | IPR001005 | - | |
Hepe10g1966 | 655 | Pfam | Myb/SANT-like DNA-binding domain | 64 | 150 | IPR044822 | - | |
Hepe10g1966 | 655 | Pfam | Myb/SANT-like DNA-binding domain | 471 | 558 | IPR044822 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe05g0345 | Hepe-Chr5:4216002 | Hepe10g1966 | Hepe-Chr10:56627531 | 1.63e-35 | dispersed | |
Hepe06g1401 | Hepe-Chr6:64251143 | Hepe10g1966 | Hepe-Chr10:56627531 | 2.22e-101 | dispersed | |
Hepe07g1470 | Hepe-Chr7:49186159 | Hepe10g1966 | Hepe-Chr10:56627531 | 1.64e-33 | dispersed | |
Hepe08g1260 | Hepe-Chr8:13552772 | Hepe10g1966 | Hepe-Chr10:56627531 | 4.24e-84 | dispersed | |
Hepe09g1484 | Hepe-Chr9:35145329 | Hepe10g1966 | Hepe-Chr10:56627531 | 4.04e-28 | dispersed | |
Hepe10g1966 | Hepe-Chr10:56627531 | Hepe10g1967 | Hepe-Chr10:56649725 | 2.03e-107 | tandem |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
56567 | PF13837 | Myb_DNA-bind_4 | 3.10E-21 | CL0123 | Hepe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe10g1966 | - | - | - | 0.0 |