Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe10g1966 ATGCTTGGCGACTCCACTACTTCCGTCTTGGGTGGCGGTGGCGGCGGCGGAGGGGAAGTCGCCGTGCCGGAGAAGACTCACCGCCAGGATGGGCTGATCGGCGAGGCGGAGGAGAATAATAACAATTCTGGTGAAGATGAGAGAGGGAGAAGTGGCGGAGGAGACGACGGCGACCGGAGCTTCGGCGGAAACCGATGGCCGAGACAAGAGACTTTGGCCCTCTTGAAAATACGCTCAGAAATGGACGTTGCTTTCCGAGATGCAAGCGTTAAAGGCCCTTTGTGGGAACAAGTTTCCAGGAAATTAGGGGAGCTTGGGTATCATCGAAGTGCAAAGAAATGCAAGGAGAAATTTGAGAATGTTTACAAATATCACAAAAGAACCAAAGAAGTTCGAAGTGGGAAACCGGATAGCAAAACTTATAAGTTTTTTGAACAATTAGAAGCTCTTGAAAATCACCCTCCTCTTAATTTCCACTCCCATTTGTCATCTAAGCCACCTCCTCCGCCGCCTCCGGGAATGGCGGCTCCGCCACCACCAACCACCGTCATTTCTCACATTCCTTCAACTGTTCCATCGACCACCACCGCCGTACCCCACTTGATGAACATTTCATTCTCTCAACCAATAAACCCCACAATTCACCTCCAATCCCCGCCCCCTCCTGCTCCCGCTCCCGCTCCGTTGCCATCAAATAACCCTACTATCTTAACTCCCGCCACCGCCGCACCTTTTCAAACCAGCATCCCTTTGGCGGCGGCAACCGTGGCAGGGTTTCAGAGCATTGAAGCGGATCTTATCTCGAACTCGACGTCTGATGATGTCGATTCGTCGACATCATCAGATGAGGCATCGAGGCGAAGGAAGAGGAAGAGGAAATGGAAGGACTTTTTTGAGAGATTAATGAAAGAAGTGATTCAAAAGCAAGAGGAAATGCAAAAGAGATTCTTGGAAGCGATTGAGAAGAGGGAGCTAGAGAGAGTTGTGAGAGAAGAAGCTTGGAGGATGCAAGAAATGGCCAAAATCAATAGAGAAAGAGAGATTTTAGCTCAAGAAAGATCAATGGCGGCTGCTAAAGACGCCGCCATTACATCCTTCCTTCACAAAATAACAGAATCCCACCACAACAACAATAACGACAATGACAACCCGTCACAACCGTCTCCGTCGCCAATGCCAATGCCAACGCCACCGCAACCGCAACAACAACCAATACAGACGTCAAATCCAACATTACCGGTCGCGCCCACGCCCCCGCCCCCGCCACCACAAGCTTCCACATTGCAAATTGTTCTTCCAAATTCCACCCCACAAAAATTGGTGAACAATAATGAATTGTTGCAAATGGAGATTATGAAAATGGATCATAATGGTGGGGAGAGTTATAGTATTAGCCCAGCTGCAAGCTCATCAAGATGGCCAAAAGTGGAAGTTGAAGCACTTATCAAATTGAGAACAAATCTTGAAACCAAATATCAAGAGAATGGGCCAAAAGGGCCATTGTGGGAAGAGATATCATCAGCCATGAAGAAAATTGGGTACAATAGAAGTTCAAAGAGGTGCAAAGAGAAGTGGGAGAACATAAACAAGTACTTCAAGAAAGTGAAGGAGAGTAAAAAATCAAGGCCTGAGGATTCCAAGACTTGCCCTTATTTCCACCAGCTTGATGCTTTGTATAAGGTGAAGAGCAACAACACCAACAACGGCAACAAGATCGATAACATCGTAATCGGATCTTCGACGCCGATTTTTCCGCATCACCAGCAGCCGTTGATGGTTCGGCCCGAGCAACAATGGCCTCCGCAGCAAGAGATAGGTCGGCCCGACTCGGGCAATGAAGATATGGAGAGCGAACCGATGGATCGGGACGATAACGATGACGACGAAGACGAGGAGGAAGAGGACGAGGGTGGTGGGAACTATGAGATTGTGGCAAGCAAACCGGCTTCAGTGAGTGCTGCAGAGTGA 1968 48.68 MLGDSTTSVLGGGGGGGGEVAVPEKTHRQDGLIGEAEENNNNSGEDERGRSGGGDDGDRSFGGNRWPRQETLALLKIRSEMDVAFRDASVKGPLWEQVSRKLGELGYHRSAKKCKEKFENVYKYHKRTKEVRSGKPDSKTYKFFEQLEALENHPPLNFHSHLSSKPPPPPPPGMAAPPPPTTVISHIPSTVPSTTTAVPHLMNISFSQPINPTIHLQSPPPPAPAPAPLPSNNPTILTPATAAPFQTSIPLAAATVAGFQSIEADLISNSTSDDVDSSTSSDEASRRRKRKRKWKDFFERLMKEVIQKQEEMQKRFLEAIEKRELERVVREEAWRMQEMAKINREREILAQERSMAAAKDAAITSFLHKITESHHNNNNDNDNPSQPSPSPMPMPTPPQPQQQPIQTSNPTLPVAPTPPPPPPQASTLQIVLPNSTPQKLVNNNELLQMEIMKMDHNGGESYSISPAASSSRWPKVEVEALIKLRTNLETKYQENGPKGPLWEEISSAMKKIGYNRSSKRCKEKWENINKYFKKVKESKKSRPEDSKTCPYFHQLDALYKVKSNNTNNGNKIDNIVIGSSTPIFPHHQQPLMVRPEQQWPPQQEIGRPDSGNEDMESEPMDRDDNDDDEDEEEEDEGGGNYEIVASKPASVSAAE 655
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 56627531 56630497 + Hsped.10g19660.1 Hepe10g1966 582513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe10g1966 655 MobiDBLite consensus disorder prediction 161 178 - -
Hepe10g1966 655 Coils Coil 295 315 - -
Hepe10g1966 655 CDD GT1 64 129 - -
Hepe10g1966 655 SMART sant 469 531 IPR001005 -
Hepe10g1966 655 SMART sant 62 124 IPR001005 -
Hepe10g1966 655 MobiDBLite consensus disorder prediction 155 178 - -
Hepe10g1966 655 MobiDBLite consensus disorder prediction 269 291 - -
Hepe10g1966 655 FunFam Trihelix transcription factor GT-2 473 534 - -
Hepe10g1966 655 MobiDBLite consensus disorder prediction 1 66 - -
Hepe10g1966 655 MobiDBLite consensus disorder prediction 596 655 - -
Hepe10g1966 655 PANTHER FI21293P1 39 624 - -
Hepe10g1966 655 MobiDBLite consensus disorder prediction 386 404 - -
Hepe10g1966 655 MobiDBLite consensus disorder prediction 411 427 - -
Hepe10g1966 655 Gene3D - 473 534 - -
Hepe10g1966 655 Gene3D - 66 127 - -
Hepe10g1966 655 MobiDBLite consensus disorder prediction 41 55 - -
Hepe10g1966 655 FunFam Trihelix transcription factor GT-2 66 127 - -
Hepe10g1966 655 MobiDBLite consensus disorder prediction 372 429 - -
Hepe10g1966 655 MobiDBLite consensus disorder prediction 616 639 - -
Hepe10g1966 655 CDD GT1 471 536 - -
Hepe10g1966 655 ProSiteProfiles Myb-like domain profile. 465 529 IPR001005 -
Hepe10g1966 655 ProSiteProfiles Myb-like domain profile. 64 122 IPR001005 -
Hepe10g1966 655 Pfam Myb/SANT-like DNA-binding domain 64 150 IPR044822 -
Hepe10g1966 655 Pfam Myb/SANT-like DNA-binding domain 471 558 IPR044822 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe05g0345 Hepe-Chr5:4216002 Hepe10g1966 Hepe-Chr10:56627531 1.63e-35 dispersed
Hepe06g1401 Hepe-Chr6:64251143 Hepe10g1966 Hepe-Chr10:56627531 2.22e-101 dispersed
Hepe07g1470 Hepe-Chr7:49186159 Hepe10g1966 Hepe-Chr10:56627531 1.64e-33 dispersed
Hepe08g1260 Hepe-Chr8:13552772 Hepe10g1966 Hepe-Chr10:56627531 4.24e-84 dispersed
Hepe09g1484 Hepe-Chr9:35145329 Hepe10g1966 Hepe-Chr10:56627531 4.04e-28 dispersed
Hepe10g1966 Hepe-Chr10:56627531 Hepe10g1967 Hepe-Chr10:56649725 2.03e-107 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
56567 PF13837 Myb_DNA-bind_4 3.10E-21 CL0123 Hepe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe10g1966 - - - 0.0