Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe10g1970 ATGGGTCGAAAGAAGCCCACTGCACGGGATGATGACAGCGCCCCTGCGGTAGCTCAGGGTGGTGGGAAGTCAAAGAAAAAGACATTTGCAGTAGACGATGATGAGTACTCCATTGGAACCGAGTTGTCTGAAGAAGCCCAAGTTCAGGAGGAGAAGGTCGTGATAACTGGGAAGAAGAAGGGTAAGAAGGGAAATTCAAAAGCTTCGCAACTTAAAGAGGATGATGATGATGATGATGATATGGATGGTGTTTCAGAAATTGTTATCACTGGAAAGAAGAAGGGTAAGTCCAAGAAGGGTGGAAGTAGCAGTGCTTTTACTGCTTCCAGTTTTGGTTTGCTTGAGGACGAGAGAAAGGATGGTGCTGATGATGATGATGAATCTGTGGTCAGTGCAGAAAAGGACGACGATGAAGGGGATGATTCCACGATCAAGTTTTCAGGTAAGAAGAAGTCGTCTAAGTCTTCAAAGAAGAGTGATTTTTCTGCAGTGTCAGCATTCAGTGCCCTTGATGATAAGAAAGATGAAGATGTAATTGATAATGAGATAACAGTTGATGAAGAGATTGATGATGAGCCAGTTATTGCATTTACAGGTAAGAAGAAGTCATCAAAAGGTGGTAAGAAGGCCGGGAATGCATTTACAGGTTTTAGTGGTCTTGATTATGAGGATGAGGACAGAGATGATGATAAAGATGAGGATGAAGATGCTACAACAATTAGCTTCTCTGGTAAGAAAAAGAAGTCAGCTAAGGCTTCGAAGAAAAGTGCCAATTCTTTTGCAGATGAAGAAAATGATGGTGAAGTTTCTATTTCAGAGCCAAATAAATTAGAAAATGATGACGTTGATGAGGACGATGCCAATGTTATTGCATTTTCTGGCAAGAAGAAGTCTTCTAAGAAGAAAAGCAGCAGTACTTTTACTGCATTAGGTGATAAAAATGCGCTGGGAAATGAAGTTAGAGATGTAGTCGCACCTGAAATACTCAATACAGCGAGTAGCAATTTTGATTCTGATTTATCAAAAGCTAACAAGACGGAGGTGGTGGCAGAAACTTCAAAAAATAAAAAGAAAAAGAAGAAGAGCGGAAGGACTGCTCAAGAAGAAGATGATTTGGATAAGATTCTTGCTGAGCTAGGAGAGGGGCCTACTATATTAAAACCAGCAGACCCTCCTCTTTCTTCAGAAGAGGCAAAAGTTGAGAATCCAACTGAGCTTGTAGCTCATCCTGATGCATCAGCTGAAAAGGAAGCTGAAGAAGATAGCACAGAATCAGCTGCAGTAAGGAAGAAGAAAAAGAAAAAGGAGAAGGAAAAGGAAAAGAAGGCAGCAGCTGCGGCAGCAGCAGCTGCTGAAGGGAATGATGAGAAAATTGAGGAGGTAAAGACCGAAATTATAGAACCCAAAAAAGGTGCTGCAAAGAGTAAAGTGTCAGAGAAGAAAGTGCCAAAGCATGTTAGGGAGATGCAAGAGGCAATGGCTAGGAGAAAAGAAGAAGAAGAGCGAAGGAAAAGGGAAGAAGAAGAAAGGTTGAGAAAGGAAGAAGAGGAGAGGAGTAGGCAAGAAGAACTTGAAAGGCAAGTTGAGGAGGCTAAGCGGAAGAAAAAAGAAAGAGAAAAAGAGAAGCTCCTACGGAAGAAACAGGAAGGCAAGCTGTTAACAGGGAAACAAAAGGAAGAACAACGGAGGTTGGAGGCAATGAGGAACCAGATACTAGCAAGTGCGGGGGGTTTACCTCTGTCTGCATCTGACCCCAGTGCACCAGCTAAACGACCAAAATATCAGACAAAGAAGACAAAACCAGCCCATCATCAAACAAATGGTAGTGTTCAAACTAAGGTAGTGGAACATATAGAAGAAAAAATACAAGAAAAAGATGTGGCAGTGACTGAAATATTGGAGTCTGAGAAGATTGAAGCTGTTGAGTCGATGCACGTGGAGGAAAAACCAGATGTTATTGAGGCTACTGAAGATAATGAAATTCAAGAAGATGAGGATGAGGATGAATGGGATGCAAAGAGTTGGGATGATGCTGTTGTTGATCTTTCCCTAAAGAGTTCCTTTGCTGACGAGGAGCTTGAATCAGAACCTGAGAATGGCATGAAAATAGATAGAAAGAATGCAGGTGCCAAGCCAGCTGCCCCTGCCCAAAAATGTTCATCTTCTCAGCTTGAGGTTGTCGAAAAGGGCAAAAGAAAAGATGATGCCATTAAGAAAAAAGCTCCAATTCCACAGGAAGAAAATCTCCGCTCACCCATCTGCTGTATTATGGGCCATGTTGATACTGGTAAAACCAAGCTACTGGACTGTATTCGTGGGACAAATGTTCAAGAGGGGGAGGCGGGAGGAATTACTCAGCAGATTGGGGCAACATATTTTCCTGCTGAGAACATTCGTGAAAGAACTAGGGAATTGAAAGCTGATGCAAAGCTGAAGGTTCCTGGCCTACTTGTTATTGATACCCCTGGGCACGAATCGTTTACAAACTTGCGTTCTCGTGGTTCAGGTTTATGTGATCTTGCAATTTTGGTTGTTGACATCATGCATGGCTTAGAGCCACAAACTATAGAATCTCTTAATCTCTTGAGGATGAGAAACACAGAATTTATTATTGCTCTGAATAAGGTGGACAGACTTTATGGCTGGAAAACAATCCGCAATGCACCAATACTTAAGACAATGAAGCAGCAATCCAAGGATGTGCAGAATGAGTTCAATATGAGGCTTATTCAGATTATCACTCAATTTAAAGAGCAGGGACTGAACACCGAGCTGTATTATAAAAATAAAGAAATGGGGGAGACTTTCAGTATAGTACCTACAAGTGCTGTAACTGGTGAAGGTGTTCCAGACATGTTATTATTATTGGTGCAGTGGGCCCAGAAATCCATGGTGGAGAAACTTACATATAGTGATGAAATGCAGTGTACCGTCTTGGAGGTCAAGGTTGTTGAAGGCCATGGAACAACCATTGATGTCATATTGGTTAATGGTGTGCTGCATGAAGGAGACCAAATAGTTGTTTGTGGCATGCAGGGCCCAATTGTTACTTCTATTCGAGCCCTATTGACGCCCCATCCTATGAAGGAACTTCGAGTGAAGGGAACATATTTGCATCATAAGGAAATCAAGGCTGCTCAGGGAATCAAAATAACTGCACAGGGTCTTGAGCATGCTATTGCTGGAACCAGTCTTCATGTGGTTGGTCCTGAGGATGACTTGGAAGACATCAAGGATTCAGCTATGGAAGATATGAAGTCGGTCTTGAGTAGGATAGACAAGACTGGTGAGGGAGTCTGTGTTCAAGCATCTACACTTGGTTCCTTGGAAGCATTGTTGGAGTTTTTGAAGTCCCCGGCAGTGAGCATTCCTGTTAGTGGAATAAGTATAGGACCCGTTCATAAAAAAGATGTCATGAAAGCTAGTGTAATGCTTGAAAAGAAAAAAGAATATGCCACTATTTTGGCTTTTGATGTTAAAGTGACTCCAGAAGCTCGAGAACTTGCTGATGAGCTTGGTGTGAAGATTTTTATTGCTGATATCATTTATCACTTGTTCGATCAATTCAAGGCCTATATTGATAATCTTAAAGAGGAAAAGAAGAAGGAAGCCGCCGAGGAAGCAGTCTTTCCTTGTGTTCTCAAGATTATACCAAATTGCATTTTCAACAAGAAGGATCCAATTGTGTTGGGGGTTGATGTAATTGATGGCATTGCTAAGATTGGCACACCAGTTTGCATTCCTCAAAGGGAATTTATTGACATTGGTCGCATTGCATCTATTGAAAATAATCACAAACCTGTTGATTTTGCAAAGAAAGGGCAGAAGATTGCCATTAAGATAGTTGGGCACTCTTCGGAGGAGCAGCAGAAGATGTATGGTAGGCATTTTGATTTGGAGGATGAACTTGTCAGCCATATATCAAGGAAGTCTATTGACCTACTTAAAGTTAATTATCGGGTTAGTTTACTTCTCTCTCTCTCCTCTCTTTCATTGATAATTTTTGAGAAATTATTAGAGGAGTTGTCGCTCGTAGTTTTACACTCTTAG 4050 41.56 MGRKKPTARDDDSAPAVAQGGGKSKKKTFAVDDDEYSIGTELSEEAQVQEEKVVITGKKKGKKGNSKASQLKEDDDDDDDMDGVSEIVITGKKKGKSKKGGSSSAFTASSFGLLEDERKDGADDDDESVVSAEKDDDEGDDSTIKFSGKKKSSKSSKKSDFSAVSAFSALDDKKDEDVIDNEITVDEEIDDEPVIAFTGKKKSSKGGKKAGNAFTGFSGLDYEDEDRDDDKDEDEDATTISFSGKKKKSAKASKKSANSFADEENDGEVSISEPNKLENDDVDEDDANVIAFSGKKKSSKKKSSSTFTALGDKNALGNEVRDVVAPEILNTASSNFDSDLSKANKTEVVAETSKNKKKKKKSGRTAQEEDDLDKILAELGEGPTILKPADPPLSSEEAKVENPTELVAHPDASAEKEAEEDSTESAAVRKKKKKKEKEKEKKAAAAAAAAAEGNDEKIEEVKTEIIEPKKGAAKSKVSEKKVPKHVREMQEAMARRKEEEERRKREEEERLRKEEEERSRQEELERQVEEAKRKKKEREKEKLLRKKQEGKLLTGKQKEEQRRLEAMRNQILASAGGLPLSASDPSAPAKRPKYQTKKTKPAHHQTNGSVQTKVVEHIEEKIQEKDVAVTEILESEKIEAVESMHVEEKPDVIEATEDNEIQEDEDEDEWDAKSWDDAVVDLSLKSSFADEELESEPENGMKIDRKNAGAKPAAPAQKCSSSQLEVVEKGKRKDDAIKKKAPIPQEENLRSPICCIMGHVDTGKTKLLDCIRGTNVQEGEAGGITQQIGATYFPAENIRERTRELKADAKLKVPGLLVIDTPGHESFTNLRSRGSGLCDLAILVVDIMHGLEPQTIESLNLLRMRNTEFIIALNKVDRLYGWKTIRNAPILKTMKQQSKDVQNEFNMRLIQIITQFKEQGLNTELYYKNKEMGETFSIVPTSAVTGEGVPDMLLLLVQWAQKSMVEKLTYSDEMQCTVLEVKVVEGHGTTIDVILVNGVLHEGDQIVVCGMQGPIVTSIRALLTPHPMKELRVKGTYLHHKEIKAAQGIKITAQGLEHAIAGTSLHVVGPEDDLEDIKDSAMEDMKSVLSRIDKTGEGVCVQASTLGSLEALLEFLKSPAVSIPVSGISIGPVHKKDVMKASVMLEKKKEYATILAFDVKVTPEARELADELGVKIFIADIIYHLFDQFKAYIDNLKEEKKKEAAEEAVFPCVLKIIPNCIFNKKDPIVLGVDVIDGIAKIGTPVCIPQREFIDIGRIASIENNHKPVDFAKKGQKIAIKIVGHSSEEQQKMYGRHFDLEDELVSHISRKSIDLLKVNYRVSLLLSLSSLSLIIFEKLLEELSLVVLHS 1349
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 56706168 56722508 + Hsped.10g19700.1 Hepe10g1970 582517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe10g1970 1349 Gene3D - 744 971 IPR027417 -
Hepe10g1970 1349 NCBIfam small GTP-binding protein domain 754 879 IPR005225 GO:0005525(InterPro)
Hepe10g1970 1349 CDD IF2_aeIF5B_IV 1212 1307 - -
Hepe10g1970 1349 MobiDBLite consensus disorder prediction 1 162 - -
Hepe10g1970 1349 SUPERFAMILY Translation proteins 1208 1323 IPR009000 -
Hepe10g1970 1349 MobiDBLite consensus disorder prediction 641 656 - -
Hepe10g1970 1349 MobiDBLite consensus disorder prediction 332 348 - -
Hepe10g1970 1349 MobiDBLite consensus disorder prediction 453 566 - -
Hepe10g1970 1349 MobiDBLite consensus disorder prediction 641 671 - -
Hepe10g1970 1349 MobiDBLite consensus disorder prediction 362 377 - -
Hepe10g1970 1349 MobiDBLite consensus disorder prediction 138 157 - -
Hepe10g1970 1349 MobiDBLite consensus disorder prediction 689 725 - -
Hepe10g1970 1349 Pfam Elongation factor Tu domain 4 1211 1284 IPR029459 -
Hepe10g1970 1349 SUPERFAMILY Initiation factor IF2/eIF5b, domain 3 1074 1203 IPR036925 -
Hepe10g1970 1349 MobiDBLite consensus disorder prediction 332 612 - -
Hepe10g1970 1349 FunFam eukaryotic translation initiation factor 5B 972 1091 - -
Hepe10g1970 1349 MobiDBLite consensus disorder prediction 689 705 - -
Hepe10g1970 1349 FunFam Eukaryotic translation initiation factor 5B 1204 1340 - -
Hepe10g1970 1349 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 749 1040 IPR027417 -
Hepe10g1970 1349 CDD aeIF5B_II 975 1083 - -
Hepe10g1970 1349 Coils Coil 428 454 - -
Hepe10g1970 1349 Pfam Translation-initiation factor 2 1078 1190 IPR023115 -
Hepe10g1970 1349 Gene3D - 1091 1197 IPR036925 -
Hepe10g1970 1349 MobiDBLite consensus disorder prediction 119 137 - -
Hepe10g1970 1349 Gene3D Translation factors 1204 1338 - -
Hepe10g1970 1349 Pfam Elongation factor Tu GTP binding domain 752 961 IPR000795 GO:0003924(InterPro)|GO:0005525(InterPro)
Hepe10g1970 1349 Gene3D Translation factors 972 1090 - -
Hepe10g1970 1349 FunFam Eukaryotic translation initiation factor 5B 1091 1197 - -
Hepe10g1970 1349 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 749 965 IPR000795 GO:0003924(InterPro)|GO:0005525(InterPro)
Hepe10g1970 1349 PANTHER TRANSLATION INITIATION FACTOR IF-2-RELATED 492 1323 IPR015760 GO:0003743(PANTHER)|GO:0005737(PANTHER)|GO:0005739(PANTHER)|GO:0006413(PANTHER)
Hepe10g1970 1349 Coils Coil 1186 1206 - -
Hepe10g1970 1349 FunFam Eukaryotic translation initiation factor 5B 744 971 - -
Hepe10g1970 1349 MobiDBLite consensus disorder prediction 657 671 - -
Hepe10g1970 1349 MobiDBLite consensus disorder prediction 222 236 - -
Hepe10g1970 1349 CDD IF2_eIF5B 752 962 - -
Hepe10g1970 1349 Coils Coil 482 553 - -
Hepe10g1970 1349 MobiDBLite consensus disorder prediction 183 318 - -
Hepe10g1970 1349 PRINTS GTP-binding elongation factor signature 753 766 IPR000795 GO:0003924(InterPro)|GO:0005525(InterPro)
Hepe10g1970 1349 PRINTS GTP-binding elongation factor signature 833 844 IPR000795 GO:0003924(InterPro)|GO:0005525(InterPro)
Hepe10g1970 1349 PRINTS GTP-binding elongation factor signature 869 878 IPR000795 GO:0003924(InterPro)|GO:0005525(InterPro)
Hepe10g1970 1349 PRINTS GTP-binding elongation factor signature 817 827 IPR000795 GO:0003924(InterPro)|GO:0005525(InterPro)
Hepe10g1970 1349 MobiDBLite consensus disorder prediction 410 431 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe07g0788 Hepe-Chr7:9604886 Hepe10g1970 Hepe-Chr10:56706168 2.22e-30 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe10g1970 K03243 - csv:101204360 1912.12