Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe10g1970 | ATGGGTCGAAAGAAGCCCACTGCACGGGATGATGACAGCGCCCCTGCGGTAGCTCAGGGTGGTGGGAAGTCAAAGAAAAAGACATTTGCAGTAGACGATGATGAGTACTCCATTGGAACCGAGTTGTCTGAAGAAGCCCAAGTTCAGGAGGAGAAGGTCGTGATAACTGGGAAGAAGAAGGGTAAGAAGGGAAATTCAAAAGCTTCGCAACTTAAAGAGGATGATGATGATGATGATGATATGGATGGTGTTTCAGAAATTGTTATCACTGGAAAGAAGAAGGGTAAGTCCAAGAAGGGTGGAAGTAGCAGTGCTTTTACTGCTTCCAGTTTTGGTTTGCTTGAGGACGAGAGAAAGGATGGTGCTGATGATGATGATGAATCTGTGGTCAGTGCAGAAAAGGACGACGATGAAGGGGATGATTCCACGATCAAGTTTTCAGGTAAGAAGAAGTCGTCTAAGTCTTCAAAGAAGAGTGATTTTTCTGCAGTGTCAGCATTCAGTGCCCTTGATGATAAGAAAGATGAAGATGTAATTGATAATGAGATAACAGTTGATGAAGAGATTGATGATGAGCCAGTTATTGCATTTACAGGTAAGAAGAAGTCATCAAAAGGTGGTAAGAAGGCCGGGAATGCATTTACAGGTTTTAGTGGTCTTGATTATGAGGATGAGGACAGAGATGATGATAAAGATGAGGATGAAGATGCTACAACAATTAGCTTCTCTGGTAAGAAAAAGAAGTCAGCTAAGGCTTCGAAGAAAAGTGCCAATTCTTTTGCAGATGAAGAAAATGATGGTGAAGTTTCTATTTCAGAGCCAAATAAATTAGAAAATGATGACGTTGATGAGGACGATGCCAATGTTATTGCATTTTCTGGCAAGAAGAAGTCTTCTAAGAAGAAAAGCAGCAGTACTTTTACTGCATTAGGTGATAAAAATGCGCTGGGAAATGAAGTTAGAGATGTAGTCGCACCTGAAATACTCAATACAGCGAGTAGCAATTTTGATTCTGATTTATCAAAAGCTAACAAGACGGAGGTGGTGGCAGAAACTTCAAAAAATAAAAAGAAAAAGAAGAAGAGCGGAAGGACTGCTCAAGAAGAAGATGATTTGGATAAGATTCTTGCTGAGCTAGGAGAGGGGCCTACTATATTAAAACCAGCAGACCCTCCTCTTTCTTCAGAAGAGGCAAAAGTTGAGAATCCAACTGAGCTTGTAGCTCATCCTGATGCATCAGCTGAAAAGGAAGCTGAAGAAGATAGCACAGAATCAGCTGCAGTAAGGAAGAAGAAAAAGAAAAAGGAGAAGGAAAAGGAAAAGAAGGCAGCAGCTGCGGCAGCAGCAGCTGCTGAAGGGAATGATGAGAAAATTGAGGAGGTAAAGACCGAAATTATAGAACCCAAAAAAGGTGCTGCAAAGAGTAAAGTGTCAGAGAAGAAAGTGCCAAAGCATGTTAGGGAGATGCAAGAGGCAATGGCTAGGAGAAAAGAAGAAGAAGAGCGAAGGAAAAGGGAAGAAGAAGAAAGGTTGAGAAAGGAAGAAGAGGAGAGGAGTAGGCAAGAAGAACTTGAAAGGCAAGTTGAGGAGGCTAAGCGGAAGAAAAAAGAAAGAGAAAAAGAGAAGCTCCTACGGAAGAAACAGGAAGGCAAGCTGTTAACAGGGAAACAAAAGGAAGAACAACGGAGGTTGGAGGCAATGAGGAACCAGATACTAGCAAGTGCGGGGGGTTTACCTCTGTCTGCATCTGACCCCAGTGCACCAGCTAAACGACCAAAATATCAGACAAAGAAGACAAAACCAGCCCATCATCAAACAAATGGTAGTGTTCAAACTAAGGTAGTGGAACATATAGAAGAAAAAATACAAGAAAAAGATGTGGCAGTGACTGAAATATTGGAGTCTGAGAAGATTGAAGCTGTTGAGTCGATGCACGTGGAGGAAAAACCAGATGTTATTGAGGCTACTGAAGATAATGAAATTCAAGAAGATGAGGATGAGGATGAATGGGATGCAAAGAGTTGGGATGATGCTGTTGTTGATCTTTCCCTAAAGAGTTCCTTTGCTGACGAGGAGCTTGAATCAGAACCTGAGAATGGCATGAAAATAGATAGAAAGAATGCAGGTGCCAAGCCAGCTGCCCCTGCCCAAAAATGTTCATCTTCTCAGCTTGAGGTTGTCGAAAAGGGCAAAAGAAAAGATGATGCCATTAAGAAAAAAGCTCCAATTCCACAGGAAGAAAATCTCCGCTCACCCATCTGCTGTATTATGGGCCATGTTGATACTGGTAAAACCAAGCTACTGGACTGTATTCGTGGGACAAATGTTCAAGAGGGGGAGGCGGGAGGAATTACTCAGCAGATTGGGGCAACATATTTTCCTGCTGAGAACATTCGTGAAAGAACTAGGGAATTGAAAGCTGATGCAAAGCTGAAGGTTCCTGGCCTACTTGTTATTGATACCCCTGGGCACGAATCGTTTACAAACTTGCGTTCTCGTGGTTCAGGTTTATGTGATCTTGCAATTTTGGTTGTTGACATCATGCATGGCTTAGAGCCACAAACTATAGAATCTCTTAATCTCTTGAGGATGAGAAACACAGAATTTATTATTGCTCTGAATAAGGTGGACAGACTTTATGGCTGGAAAACAATCCGCAATGCACCAATACTTAAGACAATGAAGCAGCAATCCAAGGATGTGCAGAATGAGTTCAATATGAGGCTTATTCAGATTATCACTCAATTTAAAGAGCAGGGACTGAACACCGAGCTGTATTATAAAAATAAAGAAATGGGGGAGACTTTCAGTATAGTACCTACAAGTGCTGTAACTGGTGAAGGTGTTCCAGACATGTTATTATTATTGGTGCAGTGGGCCCAGAAATCCATGGTGGAGAAACTTACATATAGTGATGAAATGCAGTGTACCGTCTTGGAGGTCAAGGTTGTTGAAGGCCATGGAACAACCATTGATGTCATATTGGTTAATGGTGTGCTGCATGAAGGAGACCAAATAGTTGTTTGTGGCATGCAGGGCCCAATTGTTACTTCTATTCGAGCCCTATTGACGCCCCATCCTATGAAGGAACTTCGAGTGAAGGGAACATATTTGCATCATAAGGAAATCAAGGCTGCTCAGGGAATCAAAATAACTGCACAGGGTCTTGAGCATGCTATTGCTGGAACCAGTCTTCATGTGGTTGGTCCTGAGGATGACTTGGAAGACATCAAGGATTCAGCTATGGAAGATATGAAGTCGGTCTTGAGTAGGATAGACAAGACTGGTGAGGGAGTCTGTGTTCAAGCATCTACACTTGGTTCCTTGGAAGCATTGTTGGAGTTTTTGAAGTCCCCGGCAGTGAGCATTCCTGTTAGTGGAATAAGTATAGGACCCGTTCATAAAAAAGATGTCATGAAAGCTAGTGTAATGCTTGAAAAGAAAAAAGAATATGCCACTATTTTGGCTTTTGATGTTAAAGTGACTCCAGAAGCTCGAGAACTTGCTGATGAGCTTGGTGTGAAGATTTTTATTGCTGATATCATTTATCACTTGTTCGATCAATTCAAGGCCTATATTGATAATCTTAAAGAGGAAAAGAAGAAGGAAGCCGCCGAGGAAGCAGTCTTTCCTTGTGTTCTCAAGATTATACCAAATTGCATTTTCAACAAGAAGGATCCAATTGTGTTGGGGGTTGATGTAATTGATGGCATTGCTAAGATTGGCACACCAGTTTGCATTCCTCAAAGGGAATTTATTGACATTGGTCGCATTGCATCTATTGAAAATAATCACAAACCTGTTGATTTTGCAAAGAAAGGGCAGAAGATTGCCATTAAGATAGTTGGGCACTCTTCGGAGGAGCAGCAGAAGATGTATGGTAGGCATTTTGATTTGGAGGATGAACTTGTCAGCCATATATCAAGGAAGTCTATTGACCTACTTAAAGTTAATTATCGGGTTAGTTTACTTCTCTCTCTCTCCTCTCTTTCATTGATAATTTTTGAGAAATTATTAGAGGAGTTGTCGCTCGTAGTTTTACACTCTTAG | 4050 | 41.56 | MGRKKPTARDDDSAPAVAQGGGKSKKKTFAVDDDEYSIGTELSEEAQVQEEKVVITGKKKGKKGNSKASQLKEDDDDDDDMDGVSEIVITGKKKGKSKKGGSSSAFTASSFGLLEDERKDGADDDDESVVSAEKDDDEGDDSTIKFSGKKKSSKSSKKSDFSAVSAFSALDDKKDEDVIDNEITVDEEIDDEPVIAFTGKKKSSKGGKKAGNAFTGFSGLDYEDEDRDDDKDEDEDATTISFSGKKKKSAKASKKSANSFADEENDGEVSISEPNKLENDDVDEDDANVIAFSGKKKSSKKKSSSTFTALGDKNALGNEVRDVVAPEILNTASSNFDSDLSKANKTEVVAETSKNKKKKKKSGRTAQEEDDLDKILAELGEGPTILKPADPPLSSEEAKVENPTELVAHPDASAEKEAEEDSTESAAVRKKKKKKEKEKEKKAAAAAAAAAEGNDEKIEEVKTEIIEPKKGAAKSKVSEKKVPKHVREMQEAMARRKEEEERRKREEEERLRKEEEERSRQEELERQVEEAKRKKKEREKEKLLRKKQEGKLLTGKQKEEQRRLEAMRNQILASAGGLPLSASDPSAPAKRPKYQTKKTKPAHHQTNGSVQTKVVEHIEEKIQEKDVAVTEILESEKIEAVESMHVEEKPDVIEATEDNEIQEDEDEDEWDAKSWDDAVVDLSLKSSFADEELESEPENGMKIDRKNAGAKPAAPAQKCSSSQLEVVEKGKRKDDAIKKKAPIPQEENLRSPICCIMGHVDTGKTKLLDCIRGTNVQEGEAGGITQQIGATYFPAENIRERTRELKADAKLKVPGLLVIDTPGHESFTNLRSRGSGLCDLAILVVDIMHGLEPQTIESLNLLRMRNTEFIIALNKVDRLYGWKTIRNAPILKTMKQQSKDVQNEFNMRLIQIITQFKEQGLNTELYYKNKEMGETFSIVPTSAVTGEGVPDMLLLLVQWAQKSMVEKLTYSDEMQCTVLEVKVVEGHGTTIDVILVNGVLHEGDQIVVCGMQGPIVTSIRALLTPHPMKELRVKGTYLHHKEIKAAQGIKITAQGLEHAIAGTSLHVVGPEDDLEDIKDSAMEDMKSVLSRIDKTGEGVCVQASTLGSLEALLEFLKSPAVSIPVSGISIGPVHKKDVMKASVMLEKKKEYATILAFDVKVTPEARELADELGVKIFIADIIYHLFDQFKAYIDNLKEEKKKEAAEEAVFPCVLKIIPNCIFNKKDPIVLGVDVIDGIAKIGTPVCIPQREFIDIGRIASIENNHKPVDFAKKGQKIAIKIVGHSSEEQQKMYGRHFDLEDELVSHISRKSIDLLKVNYRVSLLLSLSSLSLIIFEKLLEELSLVVLHS | 1349 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 56706168 | 56722508 | + | Hsped.10g19700.1 | Hepe10g1970 | 582517 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe10g1970 | 1349 | Gene3D | - | 744 | 971 | IPR027417 | - | |
Hepe10g1970 | 1349 | NCBIfam | small GTP-binding protein domain | 754 | 879 | IPR005225 | GO:0005525(InterPro) | |
Hepe10g1970 | 1349 | CDD | IF2_aeIF5B_IV | 1212 | 1307 | - | - | |
Hepe10g1970 | 1349 | MobiDBLite | consensus disorder prediction | 1 | 162 | - | - | |
Hepe10g1970 | 1349 | SUPERFAMILY | Translation proteins | 1208 | 1323 | IPR009000 | - | |
Hepe10g1970 | 1349 | MobiDBLite | consensus disorder prediction | 641 | 656 | - | - | |
Hepe10g1970 | 1349 | MobiDBLite | consensus disorder prediction | 332 | 348 | - | - | |
Hepe10g1970 | 1349 | MobiDBLite | consensus disorder prediction | 453 | 566 | - | - | |
Hepe10g1970 | 1349 | MobiDBLite | consensus disorder prediction | 641 | 671 | - | - | |
Hepe10g1970 | 1349 | MobiDBLite | consensus disorder prediction | 362 | 377 | - | - | |
Hepe10g1970 | 1349 | MobiDBLite | consensus disorder prediction | 138 | 157 | - | - | |
Hepe10g1970 | 1349 | MobiDBLite | consensus disorder prediction | 689 | 725 | - | - | |
Hepe10g1970 | 1349 | Pfam | Elongation factor Tu domain 4 | 1211 | 1284 | IPR029459 | - | |
Hepe10g1970 | 1349 | SUPERFAMILY | Initiation factor IF2/eIF5b, domain 3 | 1074 | 1203 | IPR036925 | - | |
Hepe10g1970 | 1349 | MobiDBLite | consensus disorder prediction | 332 | 612 | - | - | |
Hepe10g1970 | 1349 | FunFam | eukaryotic translation initiation factor 5B | 972 | 1091 | - | - | |
Hepe10g1970 | 1349 | MobiDBLite | consensus disorder prediction | 689 | 705 | - | - | |
Hepe10g1970 | 1349 | FunFam | Eukaryotic translation initiation factor 5B | 1204 | 1340 | - | - | |
Hepe10g1970 | 1349 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 749 | 1040 | IPR027417 | - | |
Hepe10g1970 | 1349 | CDD | aeIF5B_II | 975 | 1083 | - | - | |
Hepe10g1970 | 1349 | Coils | Coil | 428 | 454 | - | - | |
Hepe10g1970 | 1349 | Pfam | Translation-initiation factor 2 | 1078 | 1190 | IPR023115 | - | |
Hepe10g1970 | 1349 | Gene3D | - | 1091 | 1197 | IPR036925 | - | |
Hepe10g1970 | 1349 | MobiDBLite | consensus disorder prediction | 119 | 137 | - | - | |
Hepe10g1970 | 1349 | Gene3D | Translation factors | 1204 | 1338 | - | - | |
Hepe10g1970 | 1349 | Pfam | Elongation factor Tu GTP binding domain | 752 | 961 | IPR000795 | GO:0003924(InterPro)|GO:0005525(InterPro) | |
Hepe10g1970 | 1349 | Gene3D | Translation factors | 972 | 1090 | - | - | |
Hepe10g1970 | 1349 | FunFam | Eukaryotic translation initiation factor 5B | 1091 | 1197 | - | - | |
Hepe10g1970 | 1349 | ProSiteProfiles | Translational (tr)-type guanine nucleotide-binding (G) domain profile. | 749 | 965 | IPR000795 | GO:0003924(InterPro)|GO:0005525(InterPro) | |
Hepe10g1970 | 1349 | PANTHER | TRANSLATION INITIATION FACTOR IF-2-RELATED | 492 | 1323 | IPR015760 | GO:0003743(PANTHER)|GO:0005737(PANTHER)|GO:0005739(PANTHER)|GO:0006413(PANTHER) | |
Hepe10g1970 | 1349 | Coils | Coil | 1186 | 1206 | - | - | |
Hepe10g1970 | 1349 | FunFam | Eukaryotic translation initiation factor 5B | 744 | 971 | - | - | |
Hepe10g1970 | 1349 | MobiDBLite | consensus disorder prediction | 657 | 671 | - | - | |
Hepe10g1970 | 1349 | MobiDBLite | consensus disorder prediction | 222 | 236 | - | - | |
Hepe10g1970 | 1349 | CDD | IF2_eIF5B | 752 | 962 | - | - | |
Hepe10g1970 | 1349 | Coils | Coil | 482 | 553 | - | - | |
Hepe10g1970 | 1349 | MobiDBLite | consensus disorder prediction | 183 | 318 | - | - | |
Hepe10g1970 | 1349 | PRINTS | GTP-binding elongation factor signature | 753 | 766 | IPR000795 | GO:0003924(InterPro)|GO:0005525(InterPro) | |
Hepe10g1970 | 1349 | PRINTS | GTP-binding elongation factor signature | 833 | 844 | IPR000795 | GO:0003924(InterPro)|GO:0005525(InterPro) | |
Hepe10g1970 | 1349 | PRINTS | GTP-binding elongation factor signature | 869 | 878 | IPR000795 | GO:0003924(InterPro)|GO:0005525(InterPro) | |
Hepe10g1970 | 1349 | PRINTS | GTP-binding elongation factor signature | 817 | 827 | IPR000795 | GO:0003924(InterPro)|GO:0005525(InterPro) | |
Hepe10g1970 | 1349 | MobiDBLite | consensus disorder prediction | 410 | 431 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe07g0788 | Hepe-Chr7:9604886 | Hepe10g1970 | Hepe-Chr10:56706168 | 2.22e-30 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe10g1970 | K03243 | - | csv:101204360 | 1912.12 |