Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe10g1971 ATGTCGACACTAAACCAAAGCAGCAGCTCCCTCAACAGTTGCACCAAGTTCCCCCACCCACCCCATCATGACCAAATCCAATCCCAGCCCTTTGACTACTCCAAACGTTCCCAATGGCTACGCGCCGCCGTCCTCGGCGCCAACGACGGCCTCGTCTCCACAGCCTCTCTCATGATGGGTGTCGGCGCCGTCAAGCACGATGTCAAGGCCATGATTCTCACAGGCTTCGCCGGCCTTATCGCCGGTGCCTGCAGCATGGCCATCGGTGAGTTTGTCTCCGTCTACTCACAGTTGGATATAGAAATGGCCCATATAAAAAGAAGCTCGGAGGAGGAAGAGAGAGAGAATCTTCCGAACCCTCTTCAGGCGGCGGCAGCTTCGGCGTTGGCCTTTTCCATAGGGGCAATGGTGCCGCTCCTTGCGGCGGCGTTCATAAGGGAGTATAGGGTCCGACTCGGGGTGGTGGTGGTCGCGGTGACGATGGCATTGGTGGGGTTTGGATGGCTTGGGGCAGCGCTTGGGAAGGCGCCAGTGGTGAGGTCAGCTGTGAGGGTGTTGATCGGAGGGTGGGTGGCCATGGCTGTCACTTTTGGTTTGACCAAATTGATTGGGTCGAGTGGATTGTAA 627 57.58 MSTLNQSSSSLNSCTKFPHPPHHDQIQSQPFDYSKRSQWLRAAVLGANDGLVSTASLMMGVGAVKHDVKAMILTGFAGLIAGACSMAIGEFVSVYSQLDIEMAHIKRSSEEEERENLPNPLQAAAASALAFSIGAMVPLLAAAFIREYRVRLGVVVVAVTMALVGFGWLGAALGKAPVVRSAVRVLIGGWVAMAVTFGLTKLIGSSGL 208
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 56732704 56733330 - Hsped.10g19710.1 Hepe10g1971 582518

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Hepe10g1971 208 Coils Coil 95 115 - -
Hepe10g1971 208 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 23 205 IPR008217 GO:0005381(PANTHER)|GO:0005384(PANTHER)|GO:0005384(InterPro)|GO:0006880(PANTHER)|GO:0016020(PANTHER)|GO:0030026(InterPro)|GO:0030026(PANTHER)
Hepe10g1971 208 MobiDBLite consensus disorder prediction 1 28 - -
Hepe10g1971 208 Pfam VIT family 114 200 IPR008217 GO:0005384(InterPro)|GO:0030026(InterPro)
Hepe10g1971 208 Pfam VIT family 40 113 IPR008217 GO:0005384(InterPro)|GO:0030026(InterPro)
Hepe10g1971 208 MobiDBLite consensus disorder prediction 1 16 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe10g1971 K22736 - - csv:101210510 294.664
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g0824 Hepe-Chr2:9660085 Hepe10g1971 Hepe-Chr10:56732704 7.69e-51 dispersed
Hepe02g2791 Hepe-Chr2:76846171 Hepe10g1971 Hepe-Chr10:56732704 3.90e-87 dispersed
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Hepe07g0870 . 1 769 Nodulin-like Gene Family AT4G19180 59.0 2.8e-248 855.1
Hepe01g1585 . 24 284 Nodulin-like Gene Family AT3G45870 69.7 1.3e-97 353.2
Hepe02g3120 . 38 395 Nodulin-like Gene Family AT3G28050 61.7 2.1e-119 426.0
Hepe06g1125 . 2 278 Nodulin-like Gene Family AT5G47470 63.3 6.1e-90 328.2
Hepe02g3120 . 38 357 Nodulin-like Gene Family AT5G40240 54.0 2.5e-93 339.3
Hepe10g0597 . 17 283 Nodulin-like Gene Family AT3G53210 58.1 1.8e-85 312.8
Hepe01g1647 . 20 278 Nodulin-like Gene Family AT3G53210 60.6 5.0e-83 304.7
Hepe04g0877 . 99 332 Nodulin-like Gene Family AT2G37450 64.1 3.2e-82 302.0
Hepe01g0808 . 98 333 Nodulin-like Gene Family AT2G37450 52.5 4.7e-65 245.0
Hepe02g2286 . 77 310 Nodulin-like Gene Family AT2G37450 51.1 2.3e-64 242.7
Hepe01g2277 . 96 329 Nodulin-like Gene Family AT2G37450 53.6 6.8e-64 241.1
Hepe02g3014 . 74 310 Nodulin-like Gene Family AT2G37450 51.3 6.3e-62 234.6
Hepe02g2285 . 83 323 Nodulin-like Gene Family AT2G37450 51.8 2.4e-61 232.6
Hepe04g0877 . 12 332 Nodulin-like Gene Family AT2G37460 70.4 3.4e-125 445.3
Hepe01g0808 . 11 333 Nodulin-like Gene Family AT2G37460 55.4 1.6e-98 356.7
Hepe05g0662 . 14 342 Nodulin-like Gene Family AT2G37460 52.7 6.7e-89 324.7
Hepe02g2285 . 20 323 Nodulin-like Gene Family AT2G37460 53.2 3.0e-81 299.3
Hepe02g3014 . 39 306 Nodulin-like Gene Family AT2G37460 56.9 4.1e-78 288.9
Hepe10g0597 . 1 396 Nodulin-like Gene Family AT1G75500 73.0 4.2e-163 571.2
Hepe01g1647 . 14 392 Nodulin-like Gene Family AT1G75500 76.2 7.9e-162 567.0
Hepe09g0368 . 7 344 Nodulin-like Gene Family AT1G75500 60.8 5.9e-117 417.9
Hepe04g0877 . 12 332 Nodulin-like Gene Family AT5G13670 52.2 9.3e-91 330.9
Hepe01g0808 . 8 346 Nodulin-like Gene Family AT2G39510 60.0 3.5e-114 408.7
Hepe04g0877 . 13 366 Nodulin-like Gene Family AT2G39510 55.9 7.2e-112 401.0
Hepe02g3012 . 9 388 Nodulin-like Gene Family AT2G39510 51.0 1.4e-107 386.7
Hepe01g2277 . 10 328 Nodulin-like Gene Family AT2G39510 55.6 1.3e-97 353.6
Hepe05g0662 . 15 349 Nodulin-like Gene Family AT2G39510 52.8 1.4e-94 343.6
Hepe02g3014 . 38 339 Nodulin-like Gene Family AT2G39510 58.4 8.9e-94 340.9
Hepe04g0525 . 16 348 Nodulin-like Gene Family AT2G39510 50.3 8.3e-92 334.3
Hepe02g2285 . 6 357 Nodulin-like Gene Family AT2G39510 50.4 7.3e-88 321.2
Hepe02g3120 . 38 357 Nodulin-like Gene Family AT4G15540 51.6 6.8e-88 321.2
Hepe02g2286 . 1 237 Nodulin-like Gene Family AT4G08290 59.2 3.3e-77 285.4
Hepe01g2277 . 6 256 Nodulin-like Gene Family AT4G08290 55.7 1.2e-74 276.9
Hepe01g2277 . 6 363 Nodulin-like Gene Family AT4G08300 64.8 2.3e-126 449.1
Hepe02g2285 . 6 341 Nodulin-like Gene Family AT4G08300 57.1 1.8e-99 359.8
Hepe04g0877 . 13 332 Nodulin-like Gene Family AT4G08300 50.2 3.1e-86 315.8
Hepe10g0730 . 3 260 Nodulin-like Gene Family AT5G64700 64.0 2.1e-81 299.3
Hepe10g0726 . 39 291 Nodulin-like Gene Family AT5G64700 63.7 1.0e-80 297.0
Hepe08g2173 . 1 364 Nodulin-like Gene Family AT4G30420 54.2 4.2e-107 385.2
Hepe08g2172 . 1 371 Nodulin-like Gene Family AT4G30420 52.0 1.1e-102 370.5
Hepe08g2171 . 1 346 Nodulin-like Gene Family AT4G30420 51.5 3.3e-96 349.0
Hepe01g0949 . 6 381 Nodulin-like Gene Family AT5G07050 65.4 1.8e-140 496.1
Hepe05g0662 . 10 342 Nodulin-like Gene Family AT5G07050 66.8 5.2e-124 441.4
Hepe04g0525 . 4 356 Nodulin-like Gene Family AT5G07050 60.7 2.2e-122 436.0
Hepe01g2277 . 10 329 Nodulin-like Gene Family AT5G07050 53.4 3.9e-95 345.5
Hepe04g0877 . 11 332 Nodulin-like Gene Family AT5G07050 53.0 5.6e-94 341.7
Hepe04g0525 . 13 356 Nodulin-like Gene Family AT3G56620 57.0 4.3e-104 375.2
Hepe01g0949 . 14 344 Nodulin-like Gene Family AT3G56620 55.4 5.1e-97 351.7
Hepe09g1751 . 5 331 Nodulin-like Gene Family AT1G09380 61.0 1.1e-107 387.1
Hepe08g2237 . 1 336 Nodulin-like Gene Family AT1G09380 54.6 7.0e-107 384.4
Hepe04g0525 . 13 351 Nodulin-like Gene Family AT2G40900 60.2 1.5e-107 386.7
Hepe05g0662 . 9 364 Nodulin-like Gene Family AT2G40900 53.6 1.4e-105 380.2
Hepe01g0949 . 14 337 Nodulin-like Gene Family AT2G40900 57.1 1.6e-101 366.7
Hepe09g0368 . 1 358 Nodulin-like Gene Family AT3G18200 67.9 5.1e-129 458.0
Hepe01g1647 . 20 358 Nodulin-like Gene Family AT3G18200 57.5 6.5e-108 387.9
Hepe10g0597 . 17 361 Nodulin-like Gene Family AT3G18200 55.7 5.1e-105 378.3
Hepe01g2277 . 6 355 Nodulin-like Gene Family AT1G44800 64.0 7.6e-122 434.1
Hepe02g2285 . 6 359 Nodulin-like Gene Family AT1G44800 53.5 2.0e-98 356.3
Hepe01g1585 . 108 378 Nodulin-like Gene Family AT5G45370 67.3 4.3e-101 364.8
Hepe01g2277 . 1 306 Nodulin-like Gene Family AT1G21890 66.0 6.5e-115 411.0
Hepe02g2285 . 3 298 Nodulin-like Gene Family AT1G21890 56.1 8.3e-94 340.9
Hepe05g0662 . 7 318 Nodulin-like Gene Family AT1G21890 52.4 9.8e-87 317.4
Hepe01g0949 . 11 317 Nodulin-like Gene Family AT1G21890 50.2 5.0e-83 305.1
Hepe04g0877 . 11 313 Nodulin-like Gene Family AT1G21890 51.0 7.3e-82 301.2
Hepe02g1321 . 1 566 Nodulin-like Gene Family AT1G80530 59.6 7.1e-188 654.1
Hepe07g0001 . 1 414 Nodulin-like Gene Family AT4G19450 67.5 1.0e-151 533.5
Hepe07g0850 . 1 414 Nodulin-like Gene Family AT4G19450 67.2 1.4e-151 533.1
Hepe03g0429 . 25 419 Nodulin-like Gene Family AT4G19450 56.2 4.5e-123 438.3
Hepe09g0146 . 10 540 Nodulin-like Gene Family AT1G74780 59.6 1.5e-182 636.3
Hepe09g0147 . 5 527 Nodulin-like Gene Family AT1G74780 56.8 2.9e-167 585.5
Hepe09g0148 . 6 437 Nodulin-like Gene Family AT1G74780 56.4 4.2e-137 485.3
Hepe08g0281 . 10 545 Nodulin-like Gene Family AT4G34950 69.9 1.0e-218 756.5
Hepe02g0432 . 10 267 Nodulin-like Gene Family AT4G34950 70.8 3.3e-100 362.8
Hepe02g0433 . 1 143 Nodulin-like Gene Family AT4G34950 80.4 1.9e-63 240.7
Hepe02g3404 . 6 592 Nodulin-like Gene Family AT5G14120 69.4 1.9e-236 815.5
Hepe08g0281 . 1 391 Nodulin-like Gene Family AT2G16660 69.2 6.3e-151 530.8
Hepe02g0432 . 10 266 Nodulin-like Gene Family AT2G16660 73.4 3.4e-104 375.6
Hepe01g1053 . 13 573 Nodulin-like Gene Family AT2G39210 70.8 1.4e-229 792.7
Hepe02g2925 . 23 598 Nodulin-like Gene Family AT2G39210 62.3 2.0e-204 709.1
Hepe05g0285 . 1 576 Nodulin-like Gene Family AT2G39210 59.1 1.5e-196 682.9
Hepe10g1059 . 19 573 Nodulin-like Gene Family AT2G39210 58.7 7.1e-186 647.5
Hepe10g1074 . 11 552 Nodulin-like Gene Family AT2G39210 52.6 5.3e-157 551.6
Hepe10g1070 . 11 552 Nodulin-like Gene Family AT2G39210 52.2 2.6e-156 549.3
Hepe10g1075 . 11 552 Nodulin-like Gene Family AT2G39210 52.2 4.5e-156 548.5
Hepe01g0570 . 20 549 Nodulin-like Gene Family AT2G39210 51.5 2.0e-151 533.1
Hepe01g1055 . 6 281 Nodulin-like Gene Family AT2G39210 68.1 1.7e-102 370.5
Hepe10g1076 . 57 295 Nodulin-like Gene Family AT2G39210 60.3 3.8e-78 289.7
Hepe10g1077 . 11 239 Nodulin-like Gene Family AT2G39210 58.1 2.5e-74 276.9
Hepe10g0988 . 21 222 Nodulin-like Gene Family AT2G39210 54.8 3.4e-55 213.4
Hepe07g0001 . 6 505 Nodulin-like Gene Family AT3G01630 52.0 4.4e-129 458.8
Hepe07g0850 . 6 413 Nodulin-like Gene Family AT3G01630 50.5 1.7e-96 350.5
Hepe02g3404 . 6 429 Nodulin-like Gene Family AT3G01930 70.1 1.4e-170 596.3
Hepe09g0146 . 10 543 Nodulin-like Gene Family AT1G18940 55.0 1.1e-169 593.6
Hepe09g0147 . 5 527 Nodulin-like Gene Family AT1G18940 53.7 8.5e-159 557.4
Hepe09g0148 . 1 437 Nodulin-like Gene Family AT1G18940 53.0 2.0e-131 466.5
Hepe09g0146 . 6 541 Nodulin-like Gene Family AT2G34350 56.7 1.9e-163 572.8
Hepe09g0147 . 6 526 Nodulin-like Gene Family AT2G34350 53.9 1.2e-152 537.0
Hepe09g0148 . 7 437 Nodulin-like Gene Family AT2G34350 52.4 2.0e-123 439.9
Hepe10g1059 . 14 563 Nodulin-like Gene Family AT2G28120 70.4 7.7e-222 766.9
Hepe01g1053 . 9 581 Nodulin-like Gene Family AT2G28120 60.5 2.5e-196 682.2
Hepe05g0285 . 12 557 Nodulin-like Gene Family AT2G28120 59.4 3.4e-185 645.2
Hepe02g2925 . 21 578 Nodulin-like Gene Family AT2G28120 59.7 2.3e-181 632.5
Hepe10g1074 . 8 556 Nodulin-like Gene Family AT2G28120 58.2 3.0e-181 632.1
Hepe10g1070 . 8 569 Nodulin-like Gene Family AT2G28120 57.4 5.1e-181 631.3
Hepe10g1075 . 8 556 Nodulin-like Gene Family AT2G28120 57.5 3.6e-179 625.2
Hepe01g0570 . 9 553 Nodulin-like Gene Family AT2G28120 56.6 2.9e-176 615.5
Hepe09g1222 . 8 554 Nodulin-like Gene Family AT2G28120 54.8 2.9e-168 589.0
Hepe09g1504 . 8 565 Nodulin-like Gene Family AT2G28120 54.3 3.8e-168 588.6
Hepe01g0227 . 5 569 Nodulin-like Gene Family AT2G28120 52.4 1.9e-159 559.7
Hepe10g0746 . 1 569 Nodulin-like Gene Family AT2G28120 50.4 2.7e-158 555.8
Hepe04g0374 . 1 563 Nodulin-like Gene Family AT2G28120 50.2 7.6e-153 537.7
Hepe10g1067 . 2 363 Nodulin-like Gene Family AT2G28120 53.3 3.2e-98 356.3
Hepe10g1076 . 2 312 Nodulin-like Gene Family AT2G28120 55.6 1.9e-90 330.5
Hepe01g1055 . 20 273 Nodulin-like Gene Family AT2G28120 61.8 1.9e-87 320.5
Hepe10g1077 . 8 236 Nodulin-like Gene Family AT2G28120 62.4 4.6e-81 299.3
Hepe10g0988 . 21 226 Nodulin-like Gene Family AT2G28120 60.7 2.3e-64 243.8
Hepe07g0001 . 1 505 Nodulin-like Gene Family AT1G31470 58.7 2.0e-153 539.7
Hepe07g0850 . 1 412 Nodulin-like Gene Family AT1G31470 55.8 5.2e-117 418.7
Hepe03g0429 . 28 420 Nodulin-like Gene Family AT1G31470 52.3 4.9e-107 385.6
Hepe10g1971 . 27 208 Nodulin-like Gene Family AT1G76800 79.7 4.5e-73 271.2
Hepe02g2791 . 17 217 Nodulin-like Gene Family AT1G76800 68.2 3.5e-65 245.0
Hepe02g0824 . 11 147 Nodulin-like Gene Family AT1G76800 62.8 4.1e-42 168.3
Hepe10g1971 . 32 208 Nodulin-like Gene Family AT3G25190 64.2 1.0e-57 220.3
Hepe02g2791 . 23 217 Nodulin-like Gene Family AT3G25190 59.0 2.6e-53 205.7
Hepe02g0824 . 16 147 Nodulin-like Gene Family AT3G25190 67.9 9.3e-43 170.6
Hepe10g1971 . 27 208 Nodulin-like Gene Family AT1G21140 76.0 6.7e-72 267.3
Hepe02g2791 . 4 217 Nodulin-like Gene Family AT1G21140 66.8 2.2e-67 252.3
Hepe02g0824 . 3 147 Nodulin-like Gene Family AT1G21140 61.4 3.8e-43 171.8
Hepe10g1971 . 27 205 Nodulin-like Gene Family AT3G43630 77.8 3.9e-72 268.1
Hepe02g2791 . 20 214 Nodulin-like Gene Family AT3G43630 71.2 2.2e-67 252.3
Hepe02g0824 . 15 147 Nodulin-like Gene Family AT3G43630 66.9 3.6e-41 165.2
Hepe10g1971 . 27 208 Nodulin-like Gene Family AT3G43660 76.0 6.6e-72 267.3
Hepe02g2791 . 1 217 Nodulin-like Gene Family AT3G43660 65.4 3.8e-67 251.5
Hepe02g0824 . 17 147 Nodulin-like Gene Family AT3G43660 64.9 6.0e-41 164.5