Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe10g1971 ATGTCGACACTAAACCAAAGCAGCAGCTCCCTCAACAGTTGCACCAAGTTCCCCCACCCACCCCATCATGACCAAATCCAATCCCAGCCCTTTGACTACTCCAAACGTTCCCAATGGCTACGCGCCGCCGTCCTCGGCGCCAACGACGGCCTCGTCTCCACAGCCTCTCTCATGATGGGTGTCGGCGCCGTCAAGCACGATGTCAAGGCCATGATTCTCACAGGCTTCGCCGGCCTTATCGCCGGTGCCTGCAGCATGGCCATCGGTGAGTTTGTCTCCGTCTACTCACAGTTGGATATAGAAATGGCCCATATAAAAAGAAGCTCGGAGGAGGAAGAGAGAGAGAATCTTCCGAACCCTCTTCAGGCGGCGGCAGCTTCGGCGTTGGCCTTTTCCATAGGGGCAATGGTGCCGCTCCTTGCGGCGGCGTTCATAAGGGAGTATAGGGTCCGACTCGGGGTGGTGGTGGTCGCGGTGACGATGGCATTGGTGGGGTTTGGATGGCTTGGGGCAGCGCTTGGGAAGGCGCCAGTGGTGAGGTCAGCTGTGAGGGTGTTGATCGGAGGGTGGGTGGCCATGGCTGTCACTTTTGGTTTGACCAAATTGATTGGGTCGAGTGGATTGTAA 627 57.58 MSTLNQSSSSLNSCTKFPHPPHHDQIQSQPFDYSKRSQWLRAAVLGANDGLVSTASLMMGVGAVKHDVKAMILTGFAGLIAGACSMAIGEFVSVYSQLDIEMAHIKRSSEEEERENLPNPLQAAAASALAFSIGAMVPLLAAAFIREYRVRLGVVVVAVTMALVGFGWLGAALGKAPVVRSAVRVLIGGWVAMAVTFGLTKLIGSSGL 208
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 56732704 56733330 - Hsped.10g19710.1 Hepe10g1971 582518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe10g1971 208 Coils Coil 95 115 - -
Hepe10g1971 208 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 23 205 IPR008217 GO:0005381(PANTHER)|GO:0005384(PANTHER)|GO:0005384(InterPro)|GO:0006880(PANTHER)|GO:0016020(PANTHER)|GO:0030026(InterPro)|GO:0030026(PANTHER)
Hepe10g1971 208 MobiDBLite consensus disorder prediction 1 28 - -
Hepe10g1971 208 Pfam VIT family 114 200 IPR008217 GO:0005384(InterPro)|GO:0030026(InterPro)
Hepe10g1971 208 Pfam VIT family 40 113 IPR008217 GO:0005384(InterPro)|GO:0030026(InterPro)
Hepe10g1971 208 MobiDBLite consensus disorder prediction 1 16 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g0824 Hepe-Chr2:9660085 Hepe10g1971 Hepe-Chr10:56732704 7.69e-51 dispersed
Hepe02g2791 Hepe-Chr2:76846171 Hepe10g1971 Hepe-Chr10:56732704 3.90e-87 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe10g1971 K22736 - csv:101210510 294.664