Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe10g1972 ATGCTGATGGACCCTAATTTCTCGGCGGCGGCGGCGATGGACATCGAACAGATGCCAGAGAATCCCCACCGTGCTCCCTACCACCGCCGCTCCCACTCCGACACTTCCTTCCGCTTCCCGAACCTCGACGAACTACTCTTCTTCGACCCTTCAGAGCTCGACCTCTTGATTCTCTCTTCCCCTTCTTCTCCCCCTCCCGCCGGCGCTGCCATGGCCGTCGATTCGTCTAATTCCAAGCTTTCCGATGACGCCGTTCACCCTAAGCCGGAGCCGATTGTCTCCGGACCGTTCGGCGGCCACTTGCGGAGCTTGTCGATGGACTCTGATTTCTTCAAGAATCTGGACCTCGGCAGTGATAGTGGAGAGATCGATTCCTTGGGGAGGAGAACTCTGGTGAGTGAACAGCGGCTAGTTCGTCACCGACATAGTCTGTCCATGGATGGTTCTTCGTCGTCGTTTGAGTCCGATTCAACCCTAATGATTGATGGAGTGAAGAAGGCAATGGACCCGGAGAGACTTGCGGAGCTTGCCCTAATTGACCCGAAAAGAGCTAAAAGGATTCTTGCGAATAGACAATCTGCTGCTCGTTCGAAAGAGAGGAAGATACGGTACACGAGTGAGTTGGAGAGGAAGGTTCAGACTCTCCAGTCTGAAGCAACCACTCTGTCTGCGCAGGTGACGATTCTACAGAGAGATACTTCTGGATTAACCGTGGAAAATAAGGAACTCAAACTTCGGTTACAGGCTATGGAGCAGCAAGCACAGCTTCGGGACGCTCTGAGTGAAGCTTTGAAGGAAGAAGTTCAACGGCTTAGAATAGCAGCAGGCCGCCAGGCTCCGTCGATCAATGGAAATCCTTTCAACCGACCTCCTCAATATCCATCATCCCGGCCGCCTGTACACCATTTTAGTAGCTCCCATGCCCAGCAGGGTCAACAGCAGCCACCACCCATCTTGGCAACAAACCAGCAGCAATCAGATCTCAAATGGACGAACTCGTCCCAGCTTCTCGGTTGTAATCCCGATGGCCAAGCAGAACCTTAG 1044 53.45 MLMDPNFSAAAAMDIEQMPENPHRAPYHRRSHSDTSFRFPNLDELLFFDPSELDLLILSSPSSPPPAGAAMAVDSSNSKLSDDAVHPKPEPIVSGPFGGHLRSLSMDSDFFKNLDLGSDSGEIDSLGRRTLVSEQRLVRHRHSLSMDGSSSSFESDSTLMIDGVKKAMDPERLAELALIDPKRAKRILANRQSAARSKERKIRYTSELERKVQTLQSEATTLSAQVTILQRDTSGLTVENKELKLRLQAMEQQAQLRDALSEALKEEVQRLRIAAGRQAPSINGNPFNRPPQYPSSRPPVHHFSSSHAQQGQQQPPPILATNQQQSDLKWTNSSQLLGCNPDGQAEP 347
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 56752364 56755268 + Hsped.10g19720.1 Hepe10g1972 582519

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Hepe10g1972 347 MobiDBLite consensus disorder prediction 275 347 - -
Hepe10g1972 347 SMART brlzneu 178 242 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe10g1972 347 Pfam bZIP transcription factor 182 229 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe10g1972 347 Gene3D - 181 234 - -
Hepe10g1972 347 FunFam Transcription factor VIP1 181 234 - -
Hepe10g1972 347 SUPERFAMILY Leucine zipper domain 182 233 IPR046347 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe10g1972 347 MobiDBLite consensus disorder prediction 298 340 - -
Hepe10g1972 347 CDD bZIP_plant_RF2 183 232 IPR044759 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe10g1972 347 Coils Coil 205 225 - -
Hepe10g1972 347 Coils Coil 233 253 - -
Hepe10g1972 347 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 180 243 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe10g1972 347 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 14 326 - GO:0003700(PANTHER)|GO:0005634(PANTHER)
Hepe10g1972 347 MobiDBLite consensus disorder prediction 64 85 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe10g1972 K20557 - - csv:101207973 556.984
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g0250 Hepe-Chr2:2509442 Hepe10g1972 Hepe-Chr10:56752364 3.17e-11 dispersed
Hepe02g0460 Hepe-Chr2:4512049 Hepe10g1972 Hepe-Chr10:56752364 1.81e-42 dispersed
Hepe02g2790 Hepe-Chr2:76820424 Hepe10g1972 Hepe-Chr10:56752364 2.18e-88 dispersed
Hepe08g0435 Hepe-Chr8:3823241 Hepe10g1972 Hepe-Chr10:56752364 5.91e-13 dispersed
Hepe08g0680 Hepe-Chr8:6113069 Hepe10g1972 Hepe-Chr10:56752364 1.71e-37 dispersed
Hepe10g1972 Hepe-Chr10:56752364 Hepe10g1387 Hepe-Chr10:50227677 8.03e-52 transposed
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Hepe06g0987 . 1 340 bZIP Transcription Factor Family AT2G35530 65.5 5.7e-102 368.2
Hepe05g0642 . 22 783 bZIP Transcription Factor Family AT2G40950 50.6 2.1e-168 589.7
Hepe01g0646 . 9 335 bZIP Transcription Factor Family AT2G40620 57.0 1.5e-85 313.5
Hepe10g1387 . 1 326 bZIP Transcription Factor Family AT2G40620 51.2 9.4e-72 267.7
Hepe02g0459 . 380 504 bZIP Transcription Factor Family AT2G40620 70.4 4.0e-38 156.0
Hepe02g0460 . 384 520 bZIP Transcription Factor Family AT2G40620 65.7 4.4e-37 152.5
Hepe08g0294 . 1 232 bZIP Transcription Factor Family AT4G35040 63.8 1.5e-68 256.5
Hepe02g0426 . 1 265 bZIP Transcription Factor Family AT4G35040 55.6 2.7e-57 219.2
Hepe10g0543 . 6 332 bZIP Transcription Factor Family AT5G06950 79.5 7.5e-137 483.8
Hepe01g0968 . 1 332 bZIP Transcription Factor Family AT5G06950 76.4 4.7e-131 464.5
Hepe02g2705 . 222 555 bZIP Transcription Factor Family AT5G06950 69.1 9.5e-116 413.7
Hepe05g0675 . 137 472 bZIP Transcription Factor Family AT5G06950 66.7 3.1e-106 382.1
Hepe05g0553 . 214 507 bZIP Transcription Factor Family AT5G06950 60.5 2.1e-91 332.8
Hepe07g1296 . 60 343 bZIP Transcription Factor Family AT5G06950 57.2 1.5e-84 310.1
Hepe08g0225 . 207 482 bZIP Transcription Factor Family AT5G06950 56.9 3.7e-83 305.4
Hepe07g0658 . 79 360 bZIP Transcription Factor Family AT5G06950 55.4 4.8e-75 278.5
Hepe07g1296 . 48 371 bZIP Transcription Factor Family AT1G08320 72.5 1.3e-129 459.9
Hepe08g0225 . 201 482 bZIP Transcription Factor Family AT1G08320 70.9 1.0e-110 397.1
Hepe10g0543 . 45 332 bZIP Transcription Factor Family AT1G08320 63.5 1.5e-98 356.7
Hepe05g0553 . 191 507 bZIP Transcription Factor Family AT1G08320 58.7 7.7e-95 344.4
Hepe01g0968 . 45 332 bZIP Transcription Factor Family AT1G08320 60.8 1.6e-92 336.7
Hepe02g2705 . 263 555 bZIP Transcription Factor Family AT1G08320 58.7 8.2e-89 324.3
Hepe05g0675 . 171 472 bZIP Transcription Factor Family AT1G08320 53.6 4.8e-81 298.5
Hepe08g0294 . 1 260 bZIP Transcription Factor Family AT2G16770 62.5 1.4e-71 266.5
Hepe02g0426 . 1 265 bZIP Transcription Factor Family AT2G16770 56.8 2.3e-61 232.6
Hepe10g0543 . 25 332 bZIP Transcription Factor Family AT5G06960 79.9 6.6e-127 450.7
Hepe01g0968 . 33 332 bZIP Transcription Factor Family AT5G06960 77.3 2.3e-119 425.6
Hepe02g2705 . 248 555 bZIP Transcription Factor Family AT5G06960 67.9 2.7e-104 375.6
Hepe05g0675 . 158 472 bZIP Transcription Factor Family AT5G06960 64.6 7.9e-96 347.4
Hepe05g0553 . 200 507 bZIP Transcription Factor Family AT5G06960 60.1 2.9e-90 328.9
Hepe07g1296 . 55 343 bZIP Transcription Factor Family AT5G06960 56.7 1.0e-82 303.9
Hepe08g0225 . 203 482 bZIP Transcription Factor Family AT5G06960 54.8 1.2e-80 297.0
Hepe07g0658 . 54 360 bZIP Transcription Factor Family AT5G06960 51.9 1.2e-72 270.4
Hepe02g0460 . 1 515 bZIP Transcription Factor Family AT4G38900 59.4 3.2e-132 469.2
Hepe02g0459 . 1 502 bZIP Transcription Factor Family AT4G38900 59.6 4.3e-129 458.8
Hepe02g2790 . 110 278 bZIP Transcription Factor Family AT4G38900 58.4 3.5e-38 156.8
Hepe10g1972 . 96 276 bZIP Transcription Factor Family AT4G38900 53.4 1.1e-36 151.8
Hepe10g1387 . 127 243 bZIP Transcription Factor Family AT4G38900 74.4 3.3e-36 150.2
Hepe02g0460 . 2 520 bZIP Transcription Factor Family AT2G21230 51.6 4.8e-98 355.5
Hepe02g0459 . 2 525 bZIP Transcription Factor Family AT2G21230 51.0 1.0e-95 347.8
Hepe10g1972 . 96 276 bZIP Transcription Factor Family AT2G21230 55.4 1.1e-36 151.8
Hepe02g0250 . 1 257 bZIP Transcription Factor Family AT2G42380 57.4 1.6e-57 219.9
Hepe08g1288 . 27 363 bZIP Transcription Factor Family AT1G45249 51.9 3.7e-77 285.8
Hepe10g0543 . 9 332 bZIP Transcription Factor Family AT3G12250 80.2 8.8e-138 486.9
Hepe01g0968 . 1 332 bZIP Transcription Factor Family AT3G12250 75.9 2.6e-129 458.8
Hepe02g2705 . 222 555 bZIP Transcription Factor Family AT3G12250 68.3 1.4e-114 409.8
Hepe05g0675 . 137 472 bZIP Transcription Factor Family AT3G12250 67.8 6.2e-107 384.4
Hepe05g0553 . 214 507 bZIP Transcription Factor Family AT3G12250 59.5 1.2e-89 327.0
Hepe07g1296 . 60 343 bZIP Transcription Factor Family AT3G12250 57.2 1.6e-83 306.6
Hepe08g0225 . 207 482 bZIP Transcription Factor Family AT3G12250 56.9 6.2e-83 304.7
Hepe07g0658 . 48 360 bZIP Transcription Factor Family AT3G12250 52.8 3.7e-75 278.9
Hepe02g2705 . 104 555 bZIP Transcription Factor Family AT1G68640 62.1 1.7e-139 493.0
Hepe10g0543 . 9 332 bZIP Transcription Factor Family AT1G68640 68.2 2.2e-115 412.9
Hepe01g0968 . 1 332 bZIP Transcription Factor Family AT1G68640 64.5 8.2e-110 394.4
Hepe05g0675 . 135 472 bZIP Transcription Factor Family AT1G68640 59.5 1.8e-96 350.1
Hepe05g0553 . 202 507 bZIP Transcription Factor Family AT1G68640 55.5 6.3e-86 315.1
Hepe07g1296 . 65 343 bZIP Transcription Factor Family AT1G68640 56.4 2.2e-83 306.6
Hepe08g0225 . 205 482 bZIP Transcription Factor Family AT1G68640 54.2 6.3e-78 288.5
Hepe10g1972 . 14 289 bZIP Transcription Factor Family AT1G43700 52.5 2.6e-60 229.6
Hepe02g2790 . 12 316 bZIP Transcription Factor Family AT1G43700 52.6 5.9e-60 228.4
Hepe10g1387 . 32 202 bZIP Transcription Factor Family AT1G06850 53.0 8.1e-37 151.0
Hepe10g0263 . 1 148 bZIP Transcription Factor Family AT5G11260 64.4 1.1e-36 150.2
Hepe05g1302 . 51 370 bZIP Transcription Factor Family AT2G31370 71.3 6.1e-109 391.3
Hepe05g1299 . 37 351 bZIP Transcription Factor Family AT2G31370 68.6 9.1e-105 377.5
Hepe01g0646 . 25 242 bZIP Transcription Factor Family AT2G31370 51.0 1.5e-46 184.1
Hepe02g2790 . 142 299 bZIP Transcription Factor Family AT2G31370 61.6 1.6e-40 164.1
Hepe02g2851 . 17 322 bZIP Transcription Factor Family AT3G56850 58.2 6.6e-76 281.2
Hepe06g0987 . 33 342 bZIP Transcription Factor Family AT1G32150 67.1 3.1e-97 352.4
Hepe05g1302 . 12 364 bZIP Transcription Factor Family AT1G06070 68.5 1.6e-120 429.9
Hepe05g1299 . 1 350 bZIP Transcription Factor Family AT1G06070 67.3 4.2e-116 415.2
Hepe02g2790 . 142 317 bZIP Transcription Factor Family AT1G06070 59.6 3.6e-43 172.9
Hepe02g0460 . 384 534 bZIP Transcription Factor Family AT1G06070 61.4 4.6e-38 156.0
Hepe02g0459 . 368 512 bZIP Transcription Factor Family AT1G06070 63.9 6.0e-38 155.6
Hepe08g1288 . 27 363 bZIP Transcription Factor Family AT1G45249 51.9 3.7e-77 285.8
Hepe06g0987 . 1 340 bZIP Transcription Factor Family AT2G35530 65.5 5.7e-102 368.2
Hepe05g0642 . 22 783 bZIP Transcription Factor Family AT2G40950 50.6 2.1e-168 589.7
Hepe01g0646 . 9 335 bZIP Transcription Factor Family AT2G40620 57.0 1.5e-85 313.5
Hepe10g1387 . 1 326 bZIP Transcription Factor Family AT2G40620 51.2 9.4e-72 267.7
Hepe02g0459 . 380 504 bZIP Transcription Factor Family AT2G40620 70.4 4.0e-38 156.0
Hepe02g0460 . 384 520 bZIP Transcription Factor Family AT2G40620 65.7 4.4e-37 152.5
Hepe08g0294 . 1 232 bZIP Transcription Factor Family AT4G35040 63.8 1.5e-68 256.5
Hepe02g0426 . 1 265 bZIP Transcription Factor Family AT4G35040 55.6 2.7e-57 219.2
Hepe10g0543 . 6 332 bZIP Transcription Factor Family AT5G06950 79.5 7.5e-137 483.8
Hepe01g0968 . 1 332 bZIP Transcription Factor Family AT5G06950 76.4 4.7e-131 464.5
Hepe02g2705 . 222 555 bZIP Transcription Factor Family AT5G06950 69.1 9.5e-116 413.7
Hepe05g0675 . 137 472 bZIP Transcription Factor Family AT5G06950 66.7 3.1e-106 382.1
Hepe05g0553 . 214 507 bZIP Transcription Factor Family AT5G06950 60.5 2.1e-91 332.8
Hepe07g1296 . 60 343 bZIP Transcription Factor Family AT5G06950 57.2 1.5e-84 310.1
Hepe08g0225 . 207 482 bZIP Transcription Factor Family AT5G06950 56.9 3.7e-83 305.4
Hepe07g0658 . 79 360 bZIP Transcription Factor Family AT5G06950 55.4 4.8e-75 278.5
Hepe07g1296 . 48 371 bZIP Transcription Factor Family AT1G08320 72.5 1.3e-129 459.9
Hepe08g0225 . 201 482 bZIP Transcription Factor Family AT1G08320 70.9 1.0e-110 397.1
Hepe10g0543 . 45 332 bZIP Transcription Factor Family AT1G08320 63.5 1.5e-98 356.7
Hepe05g0553 . 191 507 bZIP Transcription Factor Family AT1G08320 58.7 7.7e-95 344.4
Hepe01g0968 . 45 332 bZIP Transcription Factor Family AT1G08320 60.8 1.6e-92 336.7
Hepe02g2705 . 263 555 bZIP Transcription Factor Family AT1G08320 58.7 8.2e-89 324.3
Hepe05g0675 . 171 472 bZIP Transcription Factor Family AT1G08320 53.6 4.8e-81 298.5
Hepe08g0294 . 1 260 bZIP Transcription Factor Family AT2G16770 62.5 1.4e-71 266.5
Hepe02g0426 . 1 265 bZIP Transcription Factor Family AT2G16770 56.8 2.3e-61 232.6
Hepe10g0543 . 25 332 bZIP Transcription Factor Family AT5G06960 79.9 6.6e-127 450.7
Hepe01g0968 . 33 332 bZIP Transcription Factor Family AT5G06960 77.3 2.3e-119 425.6
Hepe02g2705 . 248 555 bZIP Transcription Factor Family AT5G06960 67.9 2.7e-104 375.6
Hepe05g0675 . 158 472 bZIP Transcription Factor Family AT5G06960 64.6 7.9e-96 347.4
Hepe05g0553 . 200 507 bZIP Transcription Factor Family AT5G06960 60.1 2.9e-90 328.9
Hepe07g1296 . 55 343 bZIP Transcription Factor Family AT5G06960 56.7 1.0e-82 303.9
Hepe08g0225 . 203 482 bZIP Transcription Factor Family AT5G06960 54.8 1.2e-80 297.0
Hepe07g0658 . 54 360 bZIP Transcription Factor Family AT5G06960 51.9 1.2e-72 270.4
Hepe02g0460 . 1 515 bZIP Transcription Factor Family AT4G38900 59.4 3.2e-132 469.2
Hepe02g0459 . 1 502 bZIP Transcription Factor Family AT4G38900 59.6 4.3e-129 458.8
Hepe02g2790 . 110 278 bZIP Transcription Factor Family AT4G38900 58.4 3.5e-38 156.8
Hepe10g1972 . 96 276 bZIP Transcription Factor Family AT4G38900 53.4 1.1e-36 151.8
Hepe10g1387 . 127 243 bZIP Transcription Factor Family AT4G38900 74.4 3.3e-36 150.2
Hepe02g0460 . 2 520 bZIP Transcription Factor Family AT2G21230 51.6 4.8e-98 355.5
Hepe02g0459 . 2 525 bZIP Transcription Factor Family AT2G21230 51.0 1.0e-95 347.8
Hepe10g1972 . 96 276 bZIP Transcription Factor Family AT2G21230 55.4 1.1e-36 151.8
Hepe02g0250 . 1 257 bZIP Transcription Factor Family AT2G42380 57.4 1.6e-57 219.9
Hepe10g0543 . 9 332 bZIP Transcription Factor Family AT3G12250 80.2 8.8e-138 486.9
Hepe01g0968 . 1 332 bZIP Transcription Factor Family AT3G12250 75.9 2.6e-129 458.8
Hepe02g2705 . 222 555 bZIP Transcription Factor Family AT3G12250 68.3 1.4e-114 409.8
Hepe05g0675 . 137 472 bZIP Transcription Factor Family AT3G12250 67.8 6.2e-107 384.4
Hepe05g0553 . 214 507 bZIP Transcription Factor Family AT3G12250 59.5 1.2e-89 327.0
Hepe07g1296 . 60 343 bZIP Transcription Factor Family AT3G12250 57.2 1.6e-83 306.6
Hepe08g0225 . 207 482 bZIP Transcription Factor Family AT3G12250 56.9 6.2e-83 304.7
Hepe07g0658 . 48 360 bZIP Transcription Factor Family AT3G12250 52.8 3.7e-75 278.9
Hepe02g2705 . 104 555 bZIP Transcription Factor Family AT1G68640 62.1 1.7e-139 493.0
Hepe10g0543 . 9 332 bZIP Transcription Factor Family AT1G68640 68.2 2.2e-115 412.9
Hepe01g0968 . 1 332 bZIP Transcription Factor Family AT1G68640 64.5 8.2e-110 394.4
Hepe05g0675 . 135 472 bZIP Transcription Factor Family AT1G68640 59.5 1.8e-96 350.1
Hepe05g0553 . 202 507 bZIP Transcription Factor Family AT1G68640 55.5 6.3e-86 315.1
Hepe07g1296 . 65 343 bZIP Transcription Factor Family AT1G68640 56.4 2.2e-83 306.6
Hepe08g0225 . 205 482 bZIP Transcription Factor Family AT1G68640 54.2 6.3e-78 288.5
Hepe10g1972 . 14 289 bZIP Transcription Factor Family AT1G43700 52.5 2.6e-60 229.6
Hepe02g2790 . 12 316 bZIP Transcription Factor Family AT1G43700 52.6 5.9e-60 228.4
Hepe10g1387 . 32 202 bZIP Transcription Factor Family AT1G06850 53.0 8.1e-37 151.0
Hepe10g0263 . 1 148 bZIP Transcription Factor Family AT5G11260 64.4 1.1e-36 150.2
Hepe05g1302 . 51 370 bZIP Transcription Factor Family AT2G31370 71.3 6.1e-109 391.3
Hepe05g1299 . 37 351 bZIP Transcription Factor Family AT2G31370 68.6 9.1e-105 377.5
Hepe01g0646 . 25 242 bZIP Transcription Factor Family AT2G31370 51.0 1.5e-46 184.1
Hepe02g2790 . 142 299 bZIP Transcription Factor Family AT2G31370 61.6 1.6e-40 164.1
Hepe02g2851 . 17 322 bZIP Transcription Factor Family AT3G56850 58.2 6.6e-76 281.2
Hepe06g0987 . 33 342 bZIP Transcription Factor Family AT1G32150 67.1 3.1e-97 352.4
Hepe05g1302 . 12 364 bZIP Transcription Factor Family AT1G06070 68.5 1.6e-120 429.9
Hepe05g1299 . 1 350 bZIP Transcription Factor Family AT1G06070 67.3 4.2e-116 415.2
Hepe02g2790 . 142 317 bZIP Transcription Factor Family AT1G06070 59.6 3.6e-43 172.9
Hepe02g0460 . 384 534 bZIP Transcription Factor Family AT1G06070 61.4 4.6e-38 156.0
Hepe02g0459 . 368 512 bZIP Transcription Factor Family AT1G06070 63.9 6.0e-38 155.6
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
56569 PF00170 bZIP_1 3.30E-08 CL0018 Hepe TF