Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe10g1972 ATGCTGATGGACCCTAATTTCTCGGCGGCGGCGGCGATGGACATCGAACAGATGCCAGAGAATCCCCACCGTGCTCCCTACCACCGCCGCTCCCACTCCGACACTTCCTTCCGCTTCCCGAACCTCGACGAACTACTCTTCTTCGACCCTTCAGAGCTCGACCTCTTGATTCTCTCTTCCCCTTCTTCTCCCCCTCCCGCCGGCGCTGCCATGGCCGTCGATTCGTCTAATTCCAAGCTTTCCGATGACGCCGTTCACCCTAAGCCGGAGCCGATTGTCTCCGGACCGTTCGGCGGCCACTTGCGGAGCTTGTCGATGGACTCTGATTTCTTCAAGAATCTGGACCTCGGCAGTGATAGTGGAGAGATCGATTCCTTGGGGAGGAGAACTCTGGTGAGTGAACAGCGGCTAGTTCGTCACCGACATAGTCTGTCCATGGATGGTTCTTCGTCGTCGTTTGAGTCCGATTCAACCCTAATGATTGATGGAGTGAAGAAGGCAATGGACCCGGAGAGACTTGCGGAGCTTGCCCTAATTGACCCGAAAAGAGCTAAAAGGATTCTTGCGAATAGACAATCTGCTGCTCGTTCGAAAGAGAGGAAGATACGGTACACGAGTGAGTTGGAGAGGAAGGTTCAGACTCTCCAGTCTGAAGCAACCACTCTGTCTGCGCAGGTGACGATTCTACAGAGAGATACTTCTGGATTAACCGTGGAAAATAAGGAACTCAAACTTCGGTTACAGGCTATGGAGCAGCAAGCACAGCTTCGGGACGCTCTGAGTGAAGCTTTGAAGGAAGAAGTTCAACGGCTTAGAATAGCAGCAGGCCGCCAGGCTCCGTCGATCAATGGAAATCCTTTCAACCGACCTCCTCAATATCCATCATCCCGGCCGCCTGTACACCATTTTAGTAGCTCCCATGCCCAGCAGGGTCAACAGCAGCCACCACCCATCTTGGCAACAAACCAGCAGCAATCAGATCTCAAATGGACGAACTCGTCCCAGCTTCTCGGTTGTAATCCCGATGGCCAAGCAGAACCTTAG 1044 53.45 MLMDPNFSAAAAMDIEQMPENPHRAPYHRRSHSDTSFRFPNLDELLFFDPSELDLLILSSPSSPPPAGAAMAVDSSNSKLSDDAVHPKPEPIVSGPFGGHLRSLSMDSDFFKNLDLGSDSGEIDSLGRRTLVSEQRLVRHRHSLSMDGSSSSFESDSTLMIDGVKKAMDPERLAELALIDPKRAKRILANRQSAARSKERKIRYTSELERKVQTLQSEATTLSAQVTILQRDTSGLTVENKELKLRLQAMEQQAQLRDALSEALKEEVQRLRIAAGRQAPSINGNPFNRPPQYPSSRPPVHHFSSSHAQQGQQQPPPILATNQQQSDLKWTNSSQLLGCNPDGQAEP 347
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 56752364 56755268 + Hsped.10g19720.1 Hepe10g1972 582519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe10g1972 347 MobiDBLite consensus disorder prediction 275 347 - -
Hepe10g1972 347 SMART brlzneu 178 242 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe10g1972 347 Pfam bZIP transcription factor 182 229 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe10g1972 347 Gene3D - 181 234 - -
Hepe10g1972 347 FunFam Transcription factor VIP1 181 234 - -
Hepe10g1972 347 SUPERFAMILY Leucine zipper domain 182 233 IPR046347 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe10g1972 347 MobiDBLite consensus disorder prediction 298 340 - -
Hepe10g1972 347 CDD bZIP_plant_RF2 183 232 IPR044759 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe10g1972 347 Coils Coil 205 225 - -
Hepe10g1972 347 Coils Coil 233 253 - -
Hepe10g1972 347 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 180 243 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe10g1972 347 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 14 326 - GO:0003700(PANTHER)|GO:0005634(PANTHER)
Hepe10g1972 347 MobiDBLite consensus disorder prediction 64 85 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g0250 Hepe-Chr2:2509442 Hepe10g1972 Hepe-Chr10:56752364 3.17e-11 dispersed
Hepe02g0460 Hepe-Chr2:4512049 Hepe10g1972 Hepe-Chr10:56752364 1.81e-42 dispersed
Hepe02g2790 Hepe-Chr2:76820424 Hepe10g1972 Hepe-Chr10:56752364 2.18e-88 dispersed
Hepe08g0435 Hepe-Chr8:3823241 Hepe10g1972 Hepe-Chr10:56752364 5.91e-13 dispersed
Hepe08g0680 Hepe-Chr8:6113069 Hepe10g1972 Hepe-Chr10:56752364 1.71e-37 dispersed
Hepe10g1972 Hepe-Chr10:56752364 Hepe10g1387 Hepe-Chr10:50227677 8.03e-52 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
56569 PF00170 bZIP_1 3.30E-08 CL0018 Hepe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe10g1972 K20557 - csv:101207973 556.984