Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lac10g0024 ATGTCACTAAGACGTCGTGATGTTGAGCAATGGATGGAACATCGTCGCTTGCCGGAGAATTTAAGAAGGCAAGTACGACAGGCTGAAAGGTACAATTGGGCTTCTACAAGAGGTGTAAATGAAGAAAGGATTTTCGAAAATTTACCTGAGGACCTTCAAAGAAACATAAGACGACATCTCTTTAAATTTGTCAGCAATGTTCGAATTTTTGCACTGATGGACTATGAGCCTATTTTAGATGCAATACGCGAGAGACTGCGTCAAAAGACATACATAGAAGGAAGTGAAGTTTTTTCTGCTGGAGATATCGTCGAGAAGATGGTTTTCATTGTACGGGGGAAAATGGAGAGCCGTGTAGATGGGACTGGGATTGTGGTTCCCTTAATTGAAGGAGATGTCTGCGGTGAGGAACTTCTAACATGGTGTCTTGAGCATTCCTCCATAAACAGAGATATGAAGCGACCTCAATTTCCAGCACAAAGATTGGTCAGCAACCGGACCGTAAAGTGCTTATCAAATGTTGAAGCATTCTCTCTCCGGGCTGCGGACCTTGAAGAAGTGACCAGTATGTTTTCTAGATTCCTGCGAAATCCACGCGTTCAAGGAGCCATAAGGTACGAGTCACCCTACTGGAGGTACCTAGCGGCAACGCGTATTCAAGTAGCTTGGAGATACAGGAAAAGGCGTCTATCTCGAGCTCAAACCTCTCAATCTAACGACTAA 723 44.26 MSLRRRDVEQWMEHRRLPENLRRQVRQAERYNWASTRGVNEERIFENLPEDLQRNIRRHLFKFVSNVRIFALMDYEPILDAIRERLRQKTYIEGSEVFSAGDIVEKMVFIVRGKMESRVDGTGIVVPLIEGDVCGEELLTWCLEHSSINRDMKRPQFPAQRLVSNRTVKCLSNVEAFSLRAADLEEVTSMFSRFLRNPRVQGAIRYESPYWRYLAATRIQVAWRYRKRRLSRAQTSQSND 240
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
10 317598 321273 - Lag0024069.1 Lac10g0024 582555
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lac10g0024 240 Gene3D Helix hairpin bin 3 61 - -
Lac10g0024 240 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 1 233 - -
Lac10g0024 240 SUPERFAMILY cAMP-binding domain-like 5 195 IPR018490 -
Lac10g0024 240 ProSiteProfiles cAMP/cGMP binding motif profile. 82 139 IPR000595 -
Lac10g0024 240 CDD CAP_ED 69 187 IPR000595 -
Lac10g0024 240 Gene3D Jelly Rolls 67 193 IPR014710 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac10g0024 Lac-Chr10:317598 Lac3g0268 Lac-Chr3:1908412 3.30E-42 dispersed
Lac10g0024 Lac-Chr10:317598 Lac11g0144 Lac-Chr11:1326104 2.10E-44 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac10g0024 K05391 - csv:101215903 451.055