Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac10g0093 ATGAACCGTGCATTCAATTCATACCCAGATGAAAATTATGCAAATATTAGGAGATCGATGAGGCAGACTGAGGATGATCACAAGAGCGAGAGCCTATCGGACAAGGATCCGCATAGTGATTTGAAGTGCAACCAAGAAATGAGATGTGGGTTCAGTTCGATTCGAGTAATGGGTATGTTTTTGGTTTTAATGATGTTCATATCTGTGATCTTTTCGGTCTCTGTGGTTCTTAGAGACCCGCCATCGGATGCTGTAATTGAAGGTTCTGATGTGTGGATTCCTCAGTGGAACTCTGACCCAGTAGATTCTAAGGATGGAGATCTTCATACAGTTACACAGTCAGTTGATAAACTTCTTAGTGGCCTTCTTTCTGCCAAACATGGGGTAGATTCTTGTCAAAGTAGGTACAGTTCATTTGCTTATCAGCACAAGCTGGCTCATGAACCCTCTTCTTACCTGATCTCCAAATTGCGGAGTTATGAAGATCTTCATAATCGTTGTGGAGTTTATACCGAATCTTACAACAAAACTTTGGAGCAGCTTAGGTCTAATGGTAGTAGCAGCTCCTCAGATTGTACATATCTTTTGTGGATTTCCTTCAGTGGGTTAGGGAATAGAATACTGACTCTCGCTTCGGCATTTCTTTATGCTCTCCTCACGAATCGTGTTCTACTTGTTGATCCTGGAACTGACATGGCTGATCTCTTCTGTGAACCATTTCCTGAGGTTTCCTGGTTTCTTCCCCAAGATTTCCCATTAAAAAATGAGTTCAGTAACTTCAACCAGAACTCTCCTAATTGCTATGGGAAAATAATGAAGAATAGCATGACAACAGATTCAAGTGCAATGGTCTTGCCATCTGTTGTTTATCTTCACTTGGTCCATGATTATGATGATGATGATAAGCTGTTTTTCTGTGATCAAGACCAAGCTCTTCTGCAGAAATCACCTTGGCTTGTTATGAAAACAGACAACTACTTTGTCCCGTCTCTCTTTTTGATCCCGTCATTCGAGAAAGAACTTAATGATCTTTTCCCAAATAAAGATACAGTTTTCCACTTCTTGGGTCGATATCTGTTTCACCCCACGAACTCGGTTTGGGGACTGATTACGAGATATTATCAAGCTTACTTGGCTAGAGCTAGTGAAAGAATAGGCATTCAGATCAGAGTGTTTGATACAGGGACTGGACCTTTTCAACACATCCTGGATCAGGTTCTCGCCTGTACCTTGAAGGAGAATCTGTTGCCACAAACCGAAAGGCAAACGAATGTCATCGGTCCATCTAGTAATCAAAAGTCGAAGGCCGTGCTGATAACTTCCCTGAGCGCTGGTTACTTAGAGAAGCTTAGAGACATTTACTGGGAGAATCCAACAGTGACGGGAGAGAGAATTAGTTTCTACCAACCAAGTCATGAGGAACACCAGCAAACTGAGAAGAGTATACATAATCAGAAGGCATTGGCAGAGATGTATTTGTTAAGTACAACTGATGTATTGGTCACCAGCGCATGGTCGACCTTCGGATATGTCGCTCAAGGTCTTGGTGGTCTGAAACCATGGATGTTATACAAACCCGAGAATCGTACTGCACCAGATCCACCTTGCCGTCGAGCCATGTCCATGGAGCCCTGTTTCCATGCCCCTCCTTTCTATGACTGCAAGGCTAAGAAAGGAGTGGACACTGGTAAACTTGTTCCTCATGTGAGGCATTGTGAGGACATGGCCTGGGGGCTTAAGCTGGTTGATCATATATGA 1758 43.0 MNRAFNSYPDENYANIRRSMRQTEDDHKSESLSDKDPHSDLKCNQEMRCGFSSIRVMGMFLVLMMFISVIFSVSVVLRDPPSDAVIEGSDVWIPQWNSDPVDSKDGDLHTVTQSVDKLLSGLLSAKHGVDSCQSRYSSFAYQHKLAHEPSSYLISKLRSYEDLHNRCGVYTESYNKTLEQLRSNGSSSSSDCTYLLWISFSGLGNRILTLASAFLYALLTNRVLLVDPGTDMADLFCEPFPEVSWFLPQDFPLKNEFSNFNQNSPNCYGKIMKNSMTTDSSAMVLPSVVYLHLVHDYDDDDKLFFCDQDQALLQKSPWLVMKTDNYFVPSLFLIPSFEKELNDLFPNKDTVFHFLGRYLFHPTNSVWGLITRYYQAYLARASERIGIQIRVFDTGTGPFQHILDQVLACTLKENLLPQTERQTNVIGPSSNQKSKAVLITSLSAGYLEKLRDIYWENPTVTGERISFYQPSHEEHQQTEKSIHNQKALAEMYLLSTTDVLVTSAWSTFGYVAQGLGGLKPWMLYKPENRTAPDPPCRRAMSMEPCFHAPPFYDCKAKKGVDTGKLVPHVRHCEDMAWGLKLVDHI 585
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 728333 730878 - Lag0024138.1 Lac10g0093 582624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac10g0093 585 MobiDBLite consensus disorder prediction 16 39 - -
Lac10g0093 585 Pfam Xyloglucan fucosyltransferase 109 555 IPR004938 GO:0008107(InterPro)|GO:0016020(InterPro)|GO:0042546(InterPro)
Lac10g0093 585 Gene3D - 369 541 - -
Lac10g0093 585 Gene3D - 189 243 - -
Lac10g0093 585 FunFam Galactoside 2-alpha-L-fucosyltransferase 190 241 - -
Lac10g0093 585 PANTHER FUCOSYLTRANSFERASE 2-RELATED 49 583 IPR004938 GO:0005794(PANTHER)|GO:0008107(InterPro)|GO:0008417(PANTHER)|GO:0009969(PANTHER)|GO:0016020(InterPro)|GO:0042546(InterPro)
Lac10g0093 585 MobiDBLite consensus disorder prediction 17 39 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac10g0093 Lac-Chr10:728333 Lac10g1679 Lac-Chr10:18535328 2.40E-195 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac10g0093 K13681 - csv:101219153 1050.04