Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac10g0118 ATGGCGCTGTTTAGAAAATTGTTCTACCGGAAGCCTCCAGATCGGCTTCTTGAGATCGCGGAGAGAGTTTACGTGTTCGATTGTTGCTTCTCTACCGACGTCTTGGAAGAGGATGAGTACAAAGTGTACTTGGCTAGCATTATACCAAAGCTGCAGGATCACTTTCCTGATGCTTCTTTCATGGTGTTTAACTTTAGTGAAAGAAAGAGGAAGACTAAAACTTCAGACATATTGTCTCATTACGGTATGACAGTGATGGAATATCCTCTGCAATATGAAGGGTGTCCACTACTGCCACTGGAAATGATCCACCACTTCATTCGGTCGAGTGAAAGCTGGTTGTCCTTGGAGAGACAGAAAAATGTATTGTTGATGAACTGTGAACGAGGAGGATGGCCAATCCTCGCTTTCATGCTTTCAGGTCTATTATTGTACCGTAAACAATATGAAGGGGAGCAGAAGACCCTTGAAATGGTCTACAGGCAAGCTCCTAGAGAACTTTTCCATGTCCTTTCTCCTGTAAACTCACAGCCTTCTCAAATGAGATACCTTCAGTATATTTCTAGGAGAAATTTAGGTTCTGATTGGCCTCCACCTGATACTCCTCTGATTTTAGACTGTCTGATACTTCGAGACCTTCCTTTGCTTGATGGAGGAAATGGGTGCAGGCCTGTCATACGTATTTACGGTCAGGACCCATCAACACCACGAAATAGAAGTCCAAAACTTGTTTTTTCTAGTGCAAAGATGAAAAGACATGGTTCCCAGTATCTACAGGCAGCAAGCAAACTGGTAAAAATGGACGTCCATTGTTATGTTCAAGGGGATGTTGTTCTTGAGTGCATCCATTTAGATCGAGATCTAATACACGAGGAAGTGATGTTTAGAGTTATGTTTCACACGGCGTTTGTCCATTCAAACAGTTTGAAGCTCAATCGTGATGAGGTTGACGTTATATGGGATGCCGTGGAGCAGTTTCCTAAAGATTTTAGAGCAGAGGTACTTTTTGTGGATGCTGATGATGTTGTGCCAAACCTCTCTACAGTGACGAAAAGTGACGACAAAATTGAAATTGAAAGCAATTCGACTGAGGAGTTTTTTGAAGTGGAAGAAATATTTAGCAATATTGTTGACGTGCAGGAAGTTAAGAGGGACTACGATGTTCAAATGGTACATGCTAATGAAACAGATGATATTGACCATCAAGAAGTTTGGAAGGAGGATGCAGATCCTCCTACATTCCAACGCTGTAAATCTTTTGGGGGGAATCGAAACTTGGACAGGAAAATGGATTGTAACGTTGAAGCAGTGAAAGACATAACTGTTGATGACGTGACTTTCATGACAGATGAAAAAGCGGACTCTGGTCTTCATGTAGTGAAGGATATTGTTGTGGATTATGGAGATAAAAAGCCAAATCCTCTGCTATTTTCTGTCAATGTACTGAGACGTATGGGAATCAAGGAACTGATAGACAATGCTTACGACAAGTTGGAAGGGGTGGAGCGTAAAGGGTACGGAGAAGAGACTGCTGCTATTCCAGACATTGAAACAAAGGTTCCTGCGAAAAAGTTGGATTCTGAAGCGTGGAGGCTGAAATATGAGAAGTCGCAGTCACTAGCATCTAGGAAACAGCCTTCATCAACAGCTAAGCTAATAAATCATGCATCTATAGTTAAACAGAAGACCAAACAGCCAGAAGATCAGGACGTTCTTGTAAGACATGCAAAACCAAATACTCTTTCTAGATGGACTCCAAATGAAAAAGAGTCTTACATAAACTCCATGCATGTGTTTTATCCACCATCAAGGTATACCGGTGCCTCGGCAACATCTATCAGCTCTCCTACTAGAGATTCTTATTCATATTCAACTTCAAAATCTGCTTCTGCTACTTTAGGACTGCTGCTGTCAACTGATACAGCTGATGAACAAAAAAGTAACAAGGTGAGTCCTAAAAAACCTTTATGTTCCGCGACAGAGATTCTCACGAGTAAACCACAGTCACCGCTTGGCTCCCCAAGACTATTGCCAAATTCAGTTCTGCATCAAGATCCTACTCTTCCTCTATCTCCAACTACACTTCTACATCCACCAGCTCTTCATGCTAACACATCTTTCTTGCATGCAGCCTCTCCTAAAGCTTCTTTCTCACCGTCTTCGTATTCTCATATAAATGCAAGATCTCCTCCTCCACCTCCACCTCCACCACCACCTCCGCCTTCCAGTCACGTGGCGCCTAAAAGTTCAGCATTGGTGTGTGGAAATACACCTAAGCACAGTGCTCCACCGGCACCACCTCCGCCTCCTGTACGGAGAGCTCAACCACAATTACCTCCCCCACAGCCACCCCCTTCACATGGAGCTCTGCTTTCTCCACACCTCTCAAATGCTGGAGCTTTGCCACCACCCCCTCCCCCACCTCCTCCAATTCAGAGGGCAGCTCCACATTTAACCCAGGGGCGACAGACTTTAACATCTCCAACAACCTGTGTAGTCTCATCATCCCTGCCATCACCAATTTGTGAAGCACCATCACCTAAGACTGGTCCCCTTCCACTGGTTCCCTCTCCTTCCAGACCTTCAGGAGCTATGTCTCCACACCCGGGAGCTAAAGGAGTAAGTTCTTCAACTGATGTGAAAACATCATCTATAGTGAGGGGACGTGGGTTCTCGCGGTTAATGGGCACGGGGGTGGGTGGTACAGTGCCTCAACGATCATCATTAAAACCTCTGCATTGGAGCAAGGTGACTCGGGTACTACAAGGGAGCTTATGGGAAGAATTGCAAAGATCTGGAGATCCTGAAAGTGCACCAGAATTTGATGTATCTGAGCTGGAGACACTTTTCTCTGTCATTGTCCCTAAACCTATTGTTGATTCAGGAGGTAAATCCGGAGGACGAAGGAAGTCAGTTGGATCAAAATTGGACAAAGTTCACTTGATTGATCTTAGGAGGGCAAATAACACTGAAATCATGCTAACAAAAGTTAGGATGCCACTATCTGACATGATGGCAGCTGTACTCTCCATGGATGAGTCTGTATTAGATGTAGATCAAGTGGAAAATCTTATCAAATTTTGCCCCACCAAAGAGGAGATAGAGCTTCTCAAGGGATACTGTGGTGACAAGGATAAACTTGGAAAGTGCGAACAGTACTTTTTGGAGATGATGCAAGTTCCTCGTGTAGAGTCGAAGTTAAGAGTGTTCTCTTTCAAGATTCACTTCAGCTCTCAGATAGTAGAGTTCAGAAAAAGCCTAAACACTGTAAACTCTGTCTGTCAAGAGGTAAAGAATTCTTGCAAATTGAAGGAGATATTGAAGAGAATTCTTTGCCTGGGAAATATGTTAAACCAAGGAACTGCTAGGGGTTCTGCAATTGGATTCAGGTTGGATAGTCTCTCAAAACTCACAGATACACGTGCTTCTAACAATAAGATGACTCTCATGCATTATCTCTGTAAGGTCCTTGCTTCGAAGTCACCATCACTTCTTGATTTTCATCTGGACCTTGGTAGCTTGGAAGCTGCGTCTAAGATACAATTGAAATCTTTGGCAGAAGAAATGCAAGCAATAACAAAAGGACTGGACAAGGTGAAGCAGGAACTAGTTGCATCTGAAAGCGATGGCCCCATCTCTGAAACTTTCCATAAGACATTGAAAGGATTTGTTACTCTTGCTGAGACAGAGGTGGAATCTGTGACAGTTCTTTACTCGATGGCGGGTAGAAATGCTGATGCACTTGCACTATATTTTGGTGAGGATCCTGCCCGTTGTCCATTTGAACAAGGATCTGATTCCATGTGTTCAAATCCAATGCAGTTACAGGAACTCTCTTCCATTTCACAAGAAACTTTAGCCTCCCAGAAGGATAATCTAGGACCTGGATCATACCATGCTGTGCCAAGTGCCAACACTAATGGACAACTAAATTATGACTCTGAATTTCCTCCAAATGAACAACAATTTACTTCAATCTTGTGTGATCAAATTGTAGGACCAAGAAGCAAAGGCTTACTTTTTGCAGATTCTAGTTTTGATCCTTCCTGGAAAAAGCTTTTGGAGAATTATCCTAAACTAGAAGTAAAACTGGATCAGTCCCTCTGCAGCAACCCTTCTTGGAAGAGTTCATGTAGAATTGGATGA 4146 43.25 MALFRKLFYRKPPDRLLEIAERVYVFDCCFSTDVLEEDEYKVYLASIIPKLQDHFPDASFMVFNFSERKRKTKTSDILSHYGMTVMEYPLQYEGCPLLPLEMIHHFIRSSESWLSLERQKNVLLMNCERGGWPILAFMLSGLLLYRKQYEGEQKTLEMVYRQAPRELFHVLSPVNSQPSQMRYLQYISRRNLGSDWPPPDTPLILDCLILRDLPLLDGGNGCRPVIRIYGQDPSTPRNRSPKLVFSSAKMKRHGSQYLQAASKLVKMDVHCYVQGDVVLECIHLDRDLIHEEVMFRVMFHTAFVHSNSLKLNRDEVDVIWDAVEQFPKDFRAEVLFVDADDVVPNLSTVTKSDDKIEIESNSTEEFFEVEEIFSNIVDVQEVKRDYDVQMVHANETDDIDHQEVWKEDADPPTFQRCKSFGGNRNLDRKMDCNVEAVKDITVDDVTFMTDEKADSGLHVVKDIVVDYGDKKPNPLLFSVNVLRRMGIKELIDNAYDKLEGVERKGYGEETAAIPDIETKVPAKKLDSEAWRLKYEKSQSLASRKQPSSTAKLINHASIVKQKTKQPEDQDVLVRHAKPNTLSRWTPNEKESYINSMHVFYPPSRYTGASATSISSPTRDSYSYSTSKSASATLGLLLSTDTADEQKSNKVSPKKPLCSATEILTSKPQSPLGSPRLLPNSVLHQDPTLPLSPTTLLHPPALHANTSFLHAASPKASFSPSSYSHINARSPPPPPPPPPPPPSSHVAPKSSALVCGNTPKHSAPPAPPPPPVRRAQPQLPPPQPPPSHGALLSPHLSNAGALPPPPPPPPPIQRAAPHLTQGRQTLTSPTTCVVSSSLPSPICEAPSPKTGPLPLVPSPSRPSGAMSPHPGAKGVSSSTDVKTSSIVRGRGFSRLMGTGVGGTVPQRSSLKPLHWSKVTRVLQGSLWEELQRSGDPESAPEFDVSELETLFSVIVPKPIVDSGGKSGGRRKSVGSKLDKVHLIDLRRANNTEIMLTKVRMPLSDMMAAVLSMDESVLDVDQVENLIKFCPTKEEIELLKGYCGDKDKLGKCEQYFLEMMQVPRVESKLRVFSFKIHFSSQIVEFRKSLNTVNSVCQEVKNSCKLKEILKRILCLGNMLNQGTARGSAIGFRLDSLSKLTDTRASNNKMTLMHYLCKVLASKSPSLLDFHLDLGSLEAASKIQLKSLAEEMQAITKGLDKVKQELVASESDGPISETFHKTLKGFVTLAETEVESVTVLYSMAGRNADALALYFGEDPARCPFEQGSDSMCSNPMQLQELSSISQETLASQKDNLGPGSYHAVPSANTNGQLNYDSEFPPNEQQFTSILCDQIVGPRSKGLLFADSSFDPSWKKLLENYPKLEVKLDQSLCSNPSWKSSCRIG 1381
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 895096 905883 - Lag0024163.1 Lac10g0118 582649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac10g0118 1381 MobiDBLite consensus disorder prediction 844 863 - -
Lac10g0118 1381 MobiDBLite consensus disorder prediction 642 695 - -
Lac10g0118 1381 SMART it6_source 899 1343 IPR015425 -
Lac10g0118 1381 Pfam C2 domain of PTEN tumour-suppressor protein 198 337 IPR014020 -
Lac10g0118 1381 ProSiteProfiles Formin homology-2 (FH2) domain profile. 899 1301 IPR015425 -
Lac10g0118 1381 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 200 336 IPR035892 -
Lac10g0118 1381 MobiDBLite consensus disorder prediction 817 842 - -
Lac10g0118 1381 MobiDBLite consensus disorder prediction 798 814 - -
Lac10g0118 1381 Gene3D Protein tyrosine phosphatase superfamily 14 203 IPR029021 -
Lac10g0118 1381 Gene3D Formin, FH2 domain 901 1268 IPR042201 -
Lac10g0118 1381 MobiDBLite consensus disorder prediction 726 745 - -
Lac10g0118 1381 PANTHER FORMIN-J 1 1265 IPR051144 -
Lac10g0118 1381 Coils Coil 1182 1202 - -
Lac10g0118 1381 Gene3D - 204 336 - -
Lac10g0118 1381 MobiDBLite consensus disorder prediction 713 882 - -
Lac10g0118 1381 MobiDBLite consensus disorder prediction 661 675 - -
Lac10g0118 1381 SUPERFAMILY Formin homology 2 domain (FH2 domain) 802 1261 - -
Lac10g0118 1381 MobiDBLite consensus disorder prediction 760 788 - -
Lac10g0118 1381 Pfam Formin Homology 2 Domain 904 1263 IPR015425 -
Lac10g0118 1381 ProSiteProfiles C2 tensin-type domain profile. 200 339 IPR014020 -
Lac10g0118 1381 SMART PTEN_C2_2 198 338 IPR014020 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac10g0118 Lac-Chr10:895096 Lac2g0546 Lac-Chr2:4064488 1.60E-253 dispersed
Lac10g0107 Lac-Chr10:817923 Lac10g0118 Lac-Chr10:895096 1.30E-29 transposed
Lac10g0118 Lac-Chr10:895096 Lac3g0591 Lac-Chr3:4581722 0.00E+00 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac10g0118 K28090 - csv:101221127 1981.45