Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac10g0125 ATGGTTTCAGAGAGCCTCCTCCAATGGAAGAAGAAGAACGTGTGTGTGATAGGCGCAGGCCCCTCAGGGCTCGTAGCCGCCAGAGAGCTGCGAAAAGAAGGCCACAAAGTTGTGGTTTTGGAGCAAAACCACGACATTGGTGGCCAATGGCTGTACGACCCAAATGTCCAAAACGAGAATCCTTTGGGAAAATTCAATAATGGTAATTTCCCCAATGTTCACAGCAGCATTTATGCTTCTTTGAGAATCGCTTCTCCAAGAGAAATCATGGGGTTCTCTGATTTCCCATTTGTGGTCAGAAAAGGCAGAGACACCAGGAGATTTCCTGGCCACAAAGAACTGTTGTTGTATTTGAAGGATTTTTGTGATTGGTTTGGATTGAGAGAGCTCATAAGGTTCAACACAAGAGTTGAATATGTTGGAATGTTGGAATGTTCTTGTCTTTGTGATGATGTTGGGAAAGAGATTAAATGGGTTGTTAGAAGTAGAGATTATCATAGAAGAGAGATTATTGTTGGTGGTGAGGAGATTTTGTTGGTTGAAGAAGTTTTTGACGCTGTTGTTGTTGCTAGTGGACATTATACTCATCCTAGATTGCCCAACATTAAAGGGATGGACAAATGGAAGAGAAAGCAAATTCATAGTCATGTTTACCGGGTTCCCGAGCCATTTCGCGACGAGGTAGTAGTGGTGGTTGGAAATTCTCAAAGTGGCCAAGATCTATCACTAGAGCTAGTTGAAGTGGCAAAGGAAATTCATTTAAGCACAAGATCCTTAAACACCATCACTGAAGGTTTATCCAAAGTTATCAATAAATATCCAAATTTGCATCTTCAACCACAGATTGAATCTCTTGAAGAAGATGGGCGAGTGCTGTTTGTTGATGGCTCCTCCATCGTTGCTGATACTATTTTATATTGCACTGGGTATTCATATGCATTTCCATTTCTTGACACCAAAGGAATAGTTGTTGTGGATGATGATCGAGTGGGCCCTTTGTATGAACATACTTTTCCTCCATCCTTGGCTCCCTCTCTTTCTTTTATAGGCATTCCACGAAAGCTCATAGGTTTCCCTTTCTTTGAATCACAAGCAATATGGATAGCTCAACTGCTGTCTGGGAAAAGGACATTGCCATCATGGGATGATATGATGCAATCCATCAAAGAGTTTTATCACTCAAGGGATGCTGCTGGCATTCCAAAGCATAATACCCATGATTTAGCTGATTTCGAGTATTGTGACAAGTATGCCGATATCGTTGGATATCCACACTTGGAGGAATGGAGGAAAAAATTGTGCTTATCGTCGATTATAAATTACCTTACCAACCTCGAAACGTTTCGAGATTCGTGGGACGTCGACGAGCTTCTTCAAGAGGCCTTTCAAAGTCCCCATTTCACTCAACTTGGAGCTCAAGTTTTTCCTCTGTAA 1434 41.84 MVSESLLQWKKKNVCVIGAGPSGLVAARELRKEGHKVVVLEQNHDIGGQWLYDPNVQNENPLGKFNNGNFPNVHSSIYASLRIASPREIMGFSDFPFVVRKGRDTRRFPGHKELLLYLKDFCDWFGLRELIRFNTRVEYVGMLECSCLCDDVGKEIKWVVRSRDYHRREIIVGGEEILLVEEVFDAVVVASGHYTHPRLPNIKGMDKWKRKQIHSHVYRVPEPFRDEVVVVVGNSQSGQDLSLELVEVAKEIHLSTRSLNTITEGLSKVINKYPNLHLQPQIESLEEDGRVLFVDGSSIVADTILYCTGYSYAFPFLDTKGIVVVDDDRVGPLYEHTFPPSLAPSLSFIGIPRKLIGFPFFESQAIWIAQLLSGKRTLPSWDDMMQSIKEFYHSRDAAGIPKHNTHDLADFEYCDKYADIVGYPHLEEWRKKLCLSSIINYLTNLETFRDSWDVDELLQEAFQSPHFTQLGAQVFPL 477
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 946013 949718 - Lag0024170.1 Lac10g0125 582656

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Lac10g0125 477 SUPERFAMILY FAD/NAD(P)-binding domain 10 258 IPR036188 -
Lac10g0125 477 Pfam Flavin-binding monooxygenase-like 11 262 IPR020946 GO:0004499(InterPro)|GO:0050660(InterPro)|GO:0050661(InterPro)
Lac10g0125 477 Pfam Flavin-binding monooxygenase-like 276 422 IPR020946 GO:0004499(InterPro)|GO:0050660(InterPro)|GO:0050661(InterPro)
Lac10g0125 477 Gene3D - 14 450 IPR036188 -
Lac10g0125 477 Gene3D - 201 307 IPR036188 -
Lac10g0125 477 PANTHER DIMETHYLANILINE MONOOXYGENASE 11 469 IPR050346 -
Lac10g0125 477 PIRSF FMO 10 274 IPR000960 GO:0050660(InterPro)|GO:0050661(InterPro)
Lac10g0125 477 PIRSF FMO 261 428 IPR000960 GO:0050660(InterPro)|GO:0050661(InterPro)
Lac10g0125 477 PRINTS Flavin-containing monooxygenase (FMO) signature 12 28 IPR000960 GO:0050660(InterPro)|GO:0050661(InterPro)
Lac10g0125 477 PRINTS Flavin-containing monooxygenase (FMO) signature 359 372 IPR000960 GO:0050660(InterPro)|GO:0050661(InterPro)
Lac10g0125 477 PRINTS Flavin-containing monooxygenase (FMO) signature 36 60 IPR000960 GO:0050660(InterPro)|GO:0050661(InterPro)
Lac10g0125 477 PRINTS Flavin-containing monooxygenase (FMO) signature 275 292 IPR000960 GO:0050660(InterPro)|GO:0050661(InterPro)
Lac10g0125 477 PRINTS Flavin-containing monooxygenase (FMO) signature 294 321 IPR000960 GO:0050660(InterPro)|GO:0050661(InterPro)
Lac10g0125 477 FunFam Flavin-containing monooxygenase 201 307 - -
Lac10g0125 477 SUPERFAMILY FAD/NAD(P)-binding domain 276 434 IPR036188 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac10g0125 - - - - 0.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac10g0125 Lac-Chr10:946013 Lac5g0464 Lac-Chr5:5238571 1.20E-101 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi17g608 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Csa01g00575 . . . . . Bda14g00882 . Bpe15g00590 . . . . . . . . . . . Bhi08g01128 . . Lac10g0125 Hepe07g2484 . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0009615 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 3 1 1 1 1 1 1 1 1 1 1 1 1 33