Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac10g0137 ATGCCTGGAAACGAAGTTGGAGACAGGGTCCACAATTTCTTTGGCCAAGAGAATTTGTACCAGGGCCAGCATCAATCTCAGGCTACTGATGGTAGCTGGGCTGGTCTAAATAACAATCTATGGGTTAGAAACCAGAGAGAGATAAATTCTCCTTTTATTTCTAATTTGAAGAATTATAATGCTCATCAACCAGATTCTGGAGGACTGGGTCAGCCTTCTCACTCACTTCATGGTTTGCACTTCTCACAATCATATATAACTCCTGAGATTGGAAGAAGCGAGTCTCAAAATCAACATCAAACTCTGAATGGTTATGCAGCAGGACAACAACTTTTCCATGCAAGGCAGATTGAAGCAAACTTTTTAGGTGCAGATGCAGTATCTGATAGGCATATAACATCGAGAGGCCTATCTATTCATGAAGCACAACAAGTGAATAATCTTGATCTAAGCAAGAAAAATGTAGCTAGGTTGGAAACTACCGATTCTCCTGTAAATTTTGATTTTTTTGGAGGTCAACAGCAATTGAGTGGCAGGAATCCCAGTGTGACACAGGTTTTGCCTAAGCAGCAGCCTGGGAATCCTGACATGCAGCTTCTGCAACAGCAAGCGATGTTGTCACATATACAAGAACTTCAGAGGCAACACCAATTTCAGCAGCAGGAAGCAAGACAACATAGTTCGATGAATCAGATTTCATCCAACTCAAAGCCTGCTGCAGGAAACCATTCATCCACACTGATTGATGGTATTCCTGTTAACGAGTTATCTACCTCTCCTTGGCAGACTGAGCATTTGGTGAATAATACAAACTCATTGCAGCATAGTTTGTCGACACCAATGCAAGGTCCCGCTAGTGGATTTGTATTTCCTTCCGAGCAGCAACAAGCACTGCGCTTGATGGGTTTAATTCCTGAACAAGTTGATCAATCTTTATATGGGGTTCCTATATCTACTGCAAGTAGTTTTCTAGGTTCAAACTCTCTCATTCCAACAGATAAATCTGCTATGCAGCAGTTATCTGTCAGTAACAACCCCATTTCAGGGAGCCATTATGCTGCATACCCAGATCAGGTTAGCTTGCAAGATGGAATGGTTGTGAGACAGGATTTCCAGGGGAAAAGTATGTTTGGCATGTCTGCCAATCAAGGTTTAAATGGTGGATTAAACTCTGAAAATGTGCAGCATGTGAATCTCCAACAGAGAAATACATCAATGCAGGAATTTAGTAGCAGACAAGAGTTTGATGGGCGATCAGAAGTGTCACAGGAGAAGACAATGGCACAGGCTGCTCCATCGCAGAATGTGGCTACATTAGATCCCACCGAAGAAAAGATTTTGTATGGTTCAGATGATAACTTGTGGGATGCTTTTGGCAGGAGTGATAACATTACGGCAGGTGGTTACAACACGGCAGATGGTAGTGATTTTAATTCTGGATATTCATTTTTACAGAGTGGAAGTTGGAGTGCTTTGATGCAGTCAGCTGTGGCAGAAACTACAAGTGGGGATATGGGCGTTCAAGAAGGGTGGGGTGGCCTAAACTTTAATAATAATGGGCCTCCAAATGGGAATCAGCAGCCTTCAGATGCTAATGACAGTGGAAAAGTGCAACCTGTGTGGGTTGATAACAACTTGCAGACATTGAATTCTAGACATTCTTCTGTCTCTTCTGAGGCTAATAATAGGCCCAACAACTATATTAACTCAGCCAATGTCCCTGGATTTCAGCAACCGGGTCATAAACCATTCTTTCAACAAACTGAAGGCTTTCAGAATAGTAGTGCCCAAAGTTTGACTCCATTAATGGATGGTGAGAGAAAATGGGTAGATCGTAATCTGCAACAGAAGTCACTTGCTGAAGGTCGGAATTTATCTGAAAATGAAGGCAATACTTCAGGTGTGGAAATAAATGCAGATAATATGTCAGGTTCTTGGCTCCGTCAACAGAGTGTATCCTCTTATAATAGCCAACCATGTAAGCCTAATGGTTGGAACTATATTGAACCAATGTTCTCCCATGGGGGTAACAATATGAAAAATCATGAGAACCATAACATGTCACAATCTTCTCAGGGTGGAGAACATAAGAGATCTATTCGTGAAGAGATGGGTTCTGCTACTTTTAAGCAGAACCACAATTTAATTCCTAACCCAACTGATGAATTGCAGCATGCAAATCCTGCTGTTGAAAACTTGCAGATGTACAACGAAGGTGCTAATTTAATAAATAATGCTGCAGTAGCTAATGCTAGCAGTTTAAGAGATGACCTAGGAAGCAGGCAACACAATCCAATGAATCGTAATGTTACCTTTTGGAAAGATGCTAATTCTTCAATGGACTTGAAAGACAGTGGTTTTGTGGCAAAATACCAGCATCATCTTGATAAGGGTTCTCAATTATTGGAATCACCTGGGAACAACTGCCTAGAGAAGGGTGCGACTGAAATGCATGAGATTGAAAACTCAAATGCTAGTGATACACACACTTCTTCTGGTAGCAAACAGAAAGTAGGAGGTAATACCATTCGAAAGCCATCTGTAACTTCTCGCAGATTCCAGTATCATCCAATGGGGAATTTAGATATGGATGTGGAACCTTCTTTTGGAACAAGCCATGCAACACAACCACAGGCTTCTTTGCAGCAGAACTCTCATGGATTTAAAGGCGGCGAGCCAAGTAATTTTAGGCAATCCAAATCTGGGGCAGATGGAAATTCAATGGAAGTTGAAAAGAGTGACATGAAAGCCTTTGGAGATATACCTTCCAAAAGAATGCTACCACCTTTTGGATCTCGTTTTTCTTCTTCTTTGGATAAACTTGCTGGTCATGATCCTCGACAAGTGGCCTTGCCGTCAAGCCAAAACATGCTTGAGCTTCTTCATAAAGTGGACCAACCAAGAGAACATGGGAATGCCACACAAAGTCCCTCCTACCGTAATCCTTCTTCTGAAATGGGTGAAGCAGAAACTTCTGATGGCTCAGTTGGTCAAGCCCCGCGAAATCAGTCCTCTGATTCTCAAGTTTTTGGTTTGCAACTGGGTCCCCCTCAACGCATGTCCATGCAAGATGCTGCTCTAACTTCTCATTGTTCCTCGCCCATGGTTGTGAGTTCAACCCATTCTACCTCTGAAACAGGAGAACGTGGTCATATGTTGTTGGCTTCTGTAGCCTCCAAACAGAGGGATTTGAACAATACTATAACTGGTCCATCTGGACATAGTGGCAATAAAATCCCTCATATCAATGCTCAAGGAAACTTTGCTGTTGCTTCTCAATCTGCCTTCCCTTATCCTAGAAGTCATCTTCATAATCAGCACCTGGTTGCAAATCACTCTGCTAATGTGTTTTCAGATAAAATGGGTATTCATTCAAGAAGTTTTGATGACTCTTCTGAGCGGGTTGAGAATAGTCAACCGGTGTCGTCAGATGTTTCCAGAAGTGGTCTCCAAATAAACCTAGTTTCTTCCGCTGACACATCTCAGCTGAGCAGTGGTGATATAGCAAATCCACAAAATCCCCCCCAACTTGCCCAGGAATTGGGTTCTGTGCCTATGTCTCAACGGGCTGCTTTCTCAAAAGTCTCTCCTAATGAGTGGGCAAATGTTACAACCCAGAAACATTCACTACATGCAGAGCCATCAAAAGCTGCCAAATCTCATATGCATATGGACAATTCAGATAAGAGTTTTTCTGGACAAAAAAGATTGATAGTCGAGAGAAATTGGAACTAG 3735 42.2 MPGNEVGDRVHNFFGQENLYQGQHQSQATDGSWAGLNNNLWVRNQREINSPFISNLKNYNAHQPDSGGLGQPSHSLHGLHFSQSYITPEIGRSESQNQHQTLNGYAAGQQLFHARQIEANFLGADAVSDRHITSRGLSIHEAQQVNNLDLSKKNVARLETTDSPVNFDFFGGQQQLSGRNPSVTQVLPKQQPGNPDMQLLQQQAMLSHIQELQRQHQFQQQEARQHSSMNQISSNSKPAAGNHSSTLIDGIPVNELSTSPWQTEHLVNNTNSLQHSLSTPMQGPASGFVFPSEQQQALRLMGLIPEQVDQSLYGVPISTASSFLGSNSLIPTDKSAMQQLSVSNNPISGSHYAAYPDQVSLQDGMVVRQDFQGKSMFGMSANQGLNGGLNSENVQHVNLQQRNTSMQEFSSRQEFDGRSEVSQEKTMAQAAPSQNVATLDPTEEKILYGSDDNLWDAFGRSDNITAGGYNTADGSDFNSGYSFLQSGSWSALMQSAVAETTSGDMGVQEGWGGLNFNNNGPPNGNQQPSDANDSGKVQPVWVDNNLQTLNSRHSSVSSEANNRPNNYINSANVPGFQQPGHKPFFQQTEGFQNSSAQSLTPLMDGERKWVDRNLQQKSLAEGRNLSENEGNTSGVEINADNMSGSWLRQQSVSSYNSQPCKPNGWNYIEPMFSHGGNNMKNHENHNMSQSSQGGEHKRSIREEMGSATFKQNHNLIPNPTDELQHANPAVENLQMYNEGANLINNAAVANASSLRDDLGSRQHNPMNRNVTFWKDANSSMDLKDSGFVAKYQHHLDKGSQLLESPGNNCLEKGATEMHEIENSNASDTHTSSGSKQKVGGNTIRKPSVTSRRFQYHPMGNLDMDVEPSFGTSHATQPQASLQQNSHGFKGGEPSNFRQSKSGADGNSMEVEKSDMKAFGDIPSKRMLPPFGSRFSSSLDKLAGHDPRQVALPSSQNMLELLHKVDQPREHGNATQSPSYRNPSSEMGEAETSDGSVGQAPRNQSSDSQVFGLQLGPPQRMSMQDAALTSHCSSPMVVSSTHSTSETGERGHMLLASVASKQRDLNNTITGPSGHSGNKIPHINAQGNFAVASQSAFPYPRSHLHNQHLVANHSANVFSDKMGIHSRSFDDSSERVENSQPVSSDVSRSGLQINLVSSADTSQLSSGDIANPQNPPQLAQELGSVPMSQRAAFSKVSPNEWANVTTQKHSLHAEPSKAAKSHMHMDNSDKSFSGQKRLIVERNWN 1244
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 1029124 1033970 - Lag0024182.1 Lac10g0137 582668

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Lac10g0137 1244 MobiDBLite consensus disorder prediction 823 849 - -
Lac10g0137 1244 MobiDBLite consensus disorder prediction 512 537 - -
Lac10g0137 1244 MobiDBLite consensus disorder prediction 503 537 - -
Lac10g0137 1244 MobiDBLite consensus disorder prediction 211 253 - -
Lac10g0137 1244 MobiDBLite consensus disorder prediction 1125 1179 - -
Lac10g0137 1244 PANTHER DENTIN SIALOPHOSPHOPROTEIN-LIKE PROTEIN 1 1233 - -
Lac10g0137 1244 MobiDBLite consensus disorder prediction 970 1014 - -
Lac10g0137 1244 MobiDBLite consensus disorder prediction 965 1015 - -
Lac10g0137 1244 Coils Coil 209 229 - -
Lac10g0137 1244 MobiDBLite consensus disorder prediction 1134 1179 - -
Lac10g0137 1244 MobiDBLite consensus disorder prediction 1205 1244 - -
Lac10g0137 1244 MobiDBLite consensus disorder prediction 620 639 - -
Lac10g0137 1244 MobiDBLite consensus disorder prediction 680 694 - -
Lac10g0137 1244 MobiDBLite consensus disorder prediction 680 699 - -
Lac10g0137 1244 MobiDBLite consensus disorder prediction 823 910 - -
Lac10g0137 1244 MobiDBLite consensus disorder prediction 551 583 - -
Lac10g0137 1244 MobiDBLite consensus disorder prediction 1212 1230 - -
Lac10g0137 1244 MobiDBLite consensus disorder prediction 869 906 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac10g0137 - - - - 0.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac10g0137 Lac-Chr10:1029124 Lac8g2743 Lac-Chr8:44816960 2.30E-38 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi17g640 Blo04g00787 Blo16g00173 . . . Bpe13g00307 Bma06g00157 . Cmo13g01131 . . . . . . Cpe20g00066 . . . . . . . . . . . . . . . Cone2ag0816 Cone16ag0198 Cone13ag0041 Cone19ag0047 Lsi02g00108 Csa01g00588 Chy12g01510 Cme12g01954 . . Bda11g01717 Bda14g00869 . Bpe15g00586 Bma03g00846 . Sed08g2109 . . Cma13g01082 . Car13g00920 . . . Bhi08g01103 Tan05g2375 Cmetu12g1694 Lac10g0137 . . . Cla04g01165 Cam04g1224 Cec01g1735 Cco01g1781 Clacu04g1251 Cmu04g1229 Cre01g1525 . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0003705 2 2 2 2 2 1 2 1 1 1 1 1 2 1 1 2 1 4 2 1 1 1 1 1 1 1 1 4 2 1 46