Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac10g0186 ATGGCGACAAAATCCGAGAAATTCTCGGCGGATTTTGTGATGGGTGGGGTTGCTGCGATTGTTGCAAAAAGTGCAGCGGCGCCGATTGAGAGGGTCAAGCTTTTGTTGCAGAATCAGGGAGAGATGATCAAGCGAGGGCATCTCAAGAAGCCATATCTGGGCATTCATGACTGTTTCAGAAGAGTCTTGAGAGAAGAAGGGATGTTGTCGCTTTGGAGGGGAAATCAGGCTAACGTTATTCGATATTTCCCCACTCAGGCTTTCAACTTTGCGTTCAAAGGTTACTTCAAAACAAAATTTGGGCGCTCAAAAGAGAAGGATGGATACCTTAAGTGGTTTGCTGGAAATGTTGCTTCAGGAAGTGCTGCAGGAGCGACAACATCTTTGTTTCTGTATCATTTGGATTATGCACGCACTCGACTAGGCACAGATGCAAAGGACTGTGGCAGTAACAGTCAGCGGCAGTTTAAAGGGCTGCTCGATGTCTACAGAAAAACCTTGTCAAGTGATGGAATCGTCGGTCTATACCGAGGATTTAGTGTTTCAATCGTGGGAATTACTCTGTACAGGGGCATGTATTTTGGGATTTACGACACTTTAAAGCCTCTGGTTTTGGTTGGGAACTTTGAGGGAAACTTTTTTGCTAGTTTCTTATTGGGGTGGAGTATCACAACCTGTTCTGGGGTATGTGCTTATCCTTTCGACACCCTGCGACGGAGAATGATGCTTACCTCTGGACAAACAGTGAAGTACCGTAGCGCTTTGCATGCATTTTCGGAGATCATTCGCCTCGAGGGTTTTACTGCTCTTTTTCGAGGAGTCACTGCCAATATGCTTGTTGGTGTTGCAGGGGCTGGGGTTCTTGCAGGTTATGATCAACTGCACGAAATTGCCTGTCGACATGGTTACTCATTTGGGCAACCTCAAATAGCCTCAAAATGA 942 46.07 MATKSEKFSADFVMGGVAAIVAKSAAAPIERVKLLLQNQGEMIKRGHLKKPYLGIHDCFRRVLREEGMLSLWRGNQANVIRYFPTQAFNFAFKGYFKTKFGRSKEKDGYLKWFAGNVASGSAAGATTSLFLYHLDYARTRLGTDAKDCGSNSQRQFKGLLDVYRKTLSSDGIVGLYRGFSVSIVGITLYRGMYFGIYDTLKPLVLVGNFEGNFFASFLLGWSITTCSGVCAYPFDTLRRRMMLTSGQTVKYRSALHAFSEIIRLEGFTALFRGVTANMLVGVAGAGVLAGYDQLHEIACRHGYSFGQPQIASK 313
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 1433878 1435817 - Lag0024231.1 Lac10g0186 582717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac10g0186 313 ProSiteProfiles Solute carrier (Solcar) repeat profile. 111 203 IPR018108 -
Lac10g0186 313 Gene3D Mitochondrial carrier domain 2 303 IPR023395 -
Lac10g0186 313 FunFam ADP,ATP carrier protein ER-ANT1 9 303 - -
Lac10g0186 313 SUPERFAMILY Mitochondrial carrier 6 294 IPR023395 -
Lac10g0186 313 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 6 304 IPR002113 GO:0005471(InterPro)|GO:0005471(PANTHER)|GO:0005743(InterPro)|GO:0140021(InterPro)|GO:1990544(InterPro)
Lac10g0186 313 Pfam Mitochondrial carrier protein 6 102 IPR018108 -
Lac10g0186 313 Pfam Mitochondrial carrier protein 113 204 IPR018108 -
Lac10g0186 313 Pfam Mitochondrial carrier protein 212 298 IPR018108 -
Lac10g0186 313 ProSiteProfiles Solute carrier (Solcar) repeat profile. 211 297 IPR018108 -
Lac10g0186 313 PRINTS Mitochondrial carrier protein signature 126 144 IPR002067 GO:0055085(InterPro)
Lac10g0186 313 PRINTS Mitochondrial carrier protein signature 11 24 IPR002067 GO:0055085(InterPro)
Lac10g0186 313 PRINTS Mitochondrial carrier protein signature 74 94 IPR002067 GO:0055085(InterPro)
Lac10g0186 313 PRINTS Mitochondrial carrier protein signature 24 38 IPR002067 GO:0055085(InterPro)
Lac10g0186 313 PRINTS Mitochondrial carrier protein signature 220 242 IPR002067 GO:0055085(InterPro)
Lac10g0186 313 PRINTS Mitochondrial carrier protein signature 176 194 IPR002067 GO:0055085(InterPro)
Lac10g0186 313 PRINTS Adenine nucleotide translocator signature 85 97 IPR002113 GO:0005471(InterPro)|GO:0005743(InterPro)|GO:0140021(InterPro)|GO:1990544(InterPro)
Lac10g0186 313 PRINTS Adenine nucleotide translocator signature 111 124 IPR002113 GO:0005471(InterPro)|GO:0005743(InterPro)|GO:0140021(InterPro)|GO:1990544(InterPro)
Lac10g0186 313 PRINTS Adenine nucleotide translocator signature 216 232 IPR002113 GO:0005471(InterPro)|GO:0005743(InterPro)|GO:0140021(InterPro)|GO:1990544(InterPro)
Lac10g0186 313 PRINTS Adenine nucleotide translocator signature 52 73 IPR002113 GO:0005471(InterPro)|GO:0005743(InterPro)|GO:0140021(InterPro)|GO:1990544(InterPro)
Lac10g0186 313 PRINTS Adenine nucleotide translocator signature 8 20 IPR002113 GO:0005471(InterPro)|GO:0005743(InterPro)|GO:0140021(InterPro)|GO:1990544(InterPro)
Lac10g0186 313 ProSiteProfiles Solute carrier (Solcar) repeat profile. 6 99 IPR018108 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac10g0186 Lac-Chr10:1433878 Lac4g2661 Lac-Chr4:45591575 3.70E-110 dispersed
Lac10g0186 Lac-Chr10:1433878 Lac4g2872 Lac-Chr4:47263774 1.30E-11 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac10g0186 K05863 - csv:101207715 535.028