Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac10g0209 ATGGCTTCTCTCCTCTGTTCTGCTCCCTCCAAAGCGCTTCTACTTTCATTCTTCTTCCTCTTTCTGTCCTGCCATTTCTTCTCTGCAACCTGCACTGAGTTCCTCGTCGGTGATGAAGATGGCTGGGCTGTCCCTAAACCCAAAGAAGCTGATCGATACAACAAATGGGCCTCCCACAACAGATTCAATGTTAATGACACCGTCCATTTTAAGTACGAGAAAGATTCAGTGATGGTGGTGACAGAGGAAGAGTACAAGCACTGCCTTTCCTCGAAGCCTCTGTTCTTCGACAACAATGGCGACACAGTGGTGAGACTTGACAGAGCAGGGTTGTTCTATTTCATCAGTGGAGTTTCAGGGCACTGCGAGAAAGGGCAGAGGATGATAATCAAAGTGTTGGAACCTCTCAGCCCGCCACAGCCACCCTCTGCTCCACCTCAGAACAAGAACAGTGCAGTCTCTGTTTCGTCTCCAATGCTTGGAATGTTGTTTTTGTTCTTCGTTTCGTTTATGTTCATTTGA 522 47.51 MASLLCSAPSKALLLSFFFLFLSCHFFSATCTEFLVGDEDGWAVPKPKEADRYNKWASHNRFNVNDTVHFKYEKDSVMVVTEEEYKHCLSSKPLFFDNNGDTVVRLDRAGLFYFISGVSGHCEKGQRMIIKVLEPLSPPQPPSAPPQNKNSAVSVSSPMLGMLFLFFVSFMFI 173
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 1626367 1627637 - Lag0024254.1 Lac10g0209 582740
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac10g0209 173 CDD OsENODL1_like 32 133 IPR041846 -
Lac10g0209 173 Gene3D - 30 136 IPR008972 -
Lac10g0209 173 PANTHER BLUE COPPER PROTEIN 21 141 IPR039391 GO:0009055(InterPro)|GO:0046658(PANTHER)
Lac10g0209 173 Pfam Plastocyanin-like domain 49 126 IPR003245 GO:0009055(InterPro)
Lac10g0209 173 FunFam Early nodulin-like protein 1 31 136 - -
Lac10g0209 173 ProSiteProfiles Phytocyanin domain profile. 32 134 IPR003245 GO:0009055(InterPro)
Lac10g0209 173 SUPERFAMILY Cupredoxins 31 133 IPR008972 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac10g0209 Lac-Chr10:1626367 Lac8g2534 Lac-Chr8:43137326 1.10E-31 dispersed
Lac10g0209 Lac-Chr10:1626367 Lac9g2175 Lac-Chr9:41218947 4.30E-20 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac10g0209 - - - 0.0