Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lac10g0281 | ATGATTGGCCACCGATGGATTCGCGAAAGAGGGAGAACGGAAATTGCTGGAATTGAATGGCATAGAGCTGAATCAGAACCGAGGAAGGCGACTACTGGTTCTATACGGGTAAGGCAGATATTCCACCAGATTAATCAAGATGGTGAGAAGCAATCAGATTTTTTCACAGAGTATGGAGAAGCAAGCCGATACCAAATTCAGGAAGTTATTGGGAAAGGAAGCTATGGAGTTGTTGGTTCTGCAATTGACACCCAGACTGGTGAAAGAGTTGCTATCAAGAAAATTAATGATGTTTTTGAGCACGTGTCTGATGCCATACGCATCCTGAGAGAAGTTAAGCTTCTTCGGATGCTTCATCATCCAAATATTGTAGAGATAAAGCATATTATGCTTCCTCCCTCACAACGAGAGTTCAAAGACATATATATTGTTTTTGAGTTGATGAAGTCTGACCTTCACCACGTAATCAAGGCAAATAATAATCTCTCTCCCAAGCAGCATAAATTTTTCTTGTACCAGCTTCTCAGTGGTCTAAAATATATACATGCAGCAAATGTCCTTCATCGAGATTTGAAGCCCAAGAACATACTTGCCAATGCTGACTGCAAACTGAAGATATGTGATTTTGGGCTTGCTCGCGTATCTTTTAGTGATGCGCCATCTACTATTTTCTGGACAGATTATGTTGCAACTCGTTGGTATCGTGCTCCCGAACTCTGTGGATCATTTTTCTCGAGATATACCCCTGCTATAGATATATGGAGTATCGGATGCATATTTGCAGAAATGCTTACGGGAAAACCTTTGTTTCCTGGAAAAAATGTGGTTCATCAATTAGATCTAATTACCGATTTGTTTGGCACTCCTGATGCTGAAGCCATAGCGAAGATTCGGAATGAGAAGGCAAGGAGGTATCTTGGAAACATGCGTAAAAAACCACCAGTTCCATTCTCACGAAAGTTCCCTAATGTTGATCCATTGGCACTTCATTTACTGGAACGCCTCCTGGCCTTTGATCCCAAATGTCGTCTAACTGCTGCAGAGGCACTTGCCGATCCTTACTTCAATGGTTTCGCGAAAGCAGAACTTGAACATTCTATTCAACCAATTTCAAAACTTGAGTTTGAGTTTGAGAGGAGGAGATTATCAAAAGATGATGTTAGAGAGTTAATTTATGCAGAGATTTTAGAGTATCATCCCCAAATGCGTCAGGAATGTCTACGCGATGGAGATCAAAGTACCTTTATGTATCCAAGTGGTGTTGATCGATTTAAGCTTCAGTTTGCGCATCTGGAAGAGTTTGGTAAAAGTCAAAGAAGTCCTACACTTCAAAGGCAAAACGTTTCTTTACCTCGGGAGCGGGTTAGTCCACCTGAGCACAAGATAGCTGAGCGTAACTTTGATTTCGAAATAGGAAAAGACAAGAGTGCTCACCTCTTGAAAAGTGCTAGCATTAGTGCATCCAGGTGTGTTGGGGTGACACCAAAGGAGAAGTCTGAGGCAGGAGAAACGAGTTCTGAAGTGACAAATGAAGCAGTCGATGGCTTGTCTAAAAAAATTGCAGTCCTTCAGACTTGA | 1578 | 41.7 | MIGHRWIRERGRTEIAGIEWHRAESEPRKATTGSIRVRQIFHQINQDGEKQSDFFTEYGEASRYQIQEVIGKGSYGVVGSAIDTQTGERVAIKKINDVFEHVSDAIRILREVKLLRMLHHPNIVEIKHIMLPPSQREFKDIYIVFELMKSDLHHVIKANNNLSPKQHKFFLYQLLSGLKYIHAANVLHRDLKPKNILANADCKLKICDFGLARVSFSDAPSTIFWTDYVATRWYRAPELCGSFFSRYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLITDLFGTPDAEAIAKIRNEKARRYLGNMRKKPPVPFSRKFPNVDPLALHLLERLLAFDPKCRLTAAEALADPYFNGFAKAELEHSIQPISKLEFEFERRRLSKDDVRELIYAEILEYHPQMRQECLRDGDQSTFMYPSGVDRFKLQFAHLEEFGKSQRSPTLQRQNVSLPRERVSPPEHKIAERNFDFEIGKDKSAHLLKSASISASRCVGVTPKEKSEAGETSSEVTNEAVDGLSKKIAVLQT | 525 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 2129564 | 2135014 | - | Lag0024326.1 | Lac10g0281 | 582812 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lac10g0281 | 525 | PANTHER | MITOGEN-ACTIVATED PROTEIN KINASE | 61 | 396 | IPR050117 | GO:0004674(PANTHER)|GO:0004707(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0035556(PANTHER) | |
Lac10g0281 | 525 | SMART | serkin_6 | 64 | 355 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Lac10g0281 | 525 | SUPERFAMILY | Protein kinase-like (PK-like) | 60 | 359 | IPR011009 | - | |
Lac10g0281 | 525 | ProSitePatterns | Protein kinases ATP-binding region signature. | 70 | 94 | IPR017441 | GO:0005524(InterPro) | |
Lac10g0281 | 525 | Gene3D | Phosphorylase Kinase; domain 1 | 80 | 401 | - | - | |
Lac10g0281 | 525 | ProSiteProfiles | Protein kinase domain profile. | 64 | 355 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Lac10g0281 | 525 | FunFam | Mitogen-activated protein kinase | 53 | 157 | - | - | |
Lac10g0281 | 525 | CDD | STKc_TDY_MAPK | 63 | 400 | - | - | |
Lac10g0281 | 525 | Pfam | Protein kinase domain | 64 | 355 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Lac10g0281 | 525 | ProSitePatterns | MAP kinase signature. | 99 | 202 | IPR003527 | GO:0004707(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Lac10g0281 | 525 | Gene3D | Transferase(Phosphotransferase) domain 1 | 150 | 378 | - | - | |
Lac10g0281 | 525 | FunFam | Mitogen-activated protein kinase | 150 | 378 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lac10g0281 | Lac-Chr10:2129564 | Lac3g0430 | Lac-Chr3:3293053 | 4.10E-207 | dispersed | |
Lac10g0281 | Lac-Chr10:2129564 | Lac3g0442 | Lac-Chr3:3376850 | 5.10E-48 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
85621 | PF00069 | Pkinase | 1.30E-68 | CL0016 | Lac | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lac10g0281 | - | - | - | 0.0 |