Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lac10g0283 | ATGAAGAACCTCCTCAAGAAGTTCCACATCATGTCCAGTGGTCAGTCAGACGATACAGCAGAAGGGTCTACTTCATCGAGGGGCAGTAAATTAATTGAGGTTTCATCGCCTGATAAACTGCCATCTCGCTCTCGGCCGACCCATTTTAATTCGGAGCATAAACCCTTTTCAGGGTTATCCGGTTGGTTGAACTCTGTTACAAATAGGCGTAGCCCCAGTCCTCCATCATCTTCGAATCCCACAGCAGGGGAGATAATGGAGCCATCTGATTCAGTATCTAGCAGAGATGCTGCAATGGATACATCAAGGCATGATTCAGGGTCGAGCAACTCGAGGGATCCTGATATAGAGGAAGAGTATCAGATACAGCTTGCTTTGGAAATGAGTGCCAGAGAGGATCCTGAGGCGGCTCAGATTGAGGCTGTGAAGCAGATCAGTTTGGGGTCATGTGATCCTGATAACACTCCAGCTGAAGTTATTGCCTTCAGATATTGGAATTACAATTCTCTTAGCTATGATGACAAGATCTTGGATGGCTTTTATGACCTATATGGAGTCTTCACTGAGTCCACCTCAGAAAGAATGCCTTCCCTAGTTGATCTTCAAGGAGCACCAATGTCTGACAGTGTCACTTGGGAAGCAGTTCTGATCAATAAAGCTGCTGATGCTAACTTATTGAAACTTGAACAGACGGCATTGGAGATGGCCATCAAGATGAGGTCGGAATCTCCAGTTTCTGTAAATAGTTATTTGGTGCGGAAGCTTGCTGTTTTAGTTTCGGATTATATGGGGGGACCAGTGGGGGATCCTGAAAAGATGTTGAGGAAATGGAGAAATCTTAGTTACAGCTTGAAAGCAACCCTTGGCAGTATGGTTTTGCCTCTTGGCTCCCTTACTGTAGGGTTGGCCCGTCATCGTGCATTGTTATTCAAGCTTTTGGCGGATGGCGTGGATATCCCCTGTAGGTTGGTGAAAGGACCACAGTACACAGGTTCTGATGATGTGGCGATGAACTTCATAAAGATTGATGATGGAAGGGAGTACATTGTGGATTTAATGGCAGATCCTGGTACACTTATTCCAGCTGATGTTGCTGGATTGCATGTAGAGTATGATGAATCCCCTTTTTCAGCCAGTCCACTTTCTAGAGATGTTGATTCCTCTCAGGCAGCCTCTTCAAGCAGTGGGGTTGGCAGTTCATTAGAGGAAAATTCAGATTTTGGGACTTCAGATAGGAAACCAAAGTCCCGGAATTTCAGTGCCACAAAGGAATATGATCCTCCCAATGTCGACAAGGGGCTATCACGCGATTTTGCTAGCAAACCAAATTATCCTGGCATGCACGTTAGATCACCTTCTTGGACTGAGGGTGTTAGTTCCCCTGCAGTGCGCAGAATGAAAGTAAAGGATGTTTCACAATACATGATTGATGCTGCCAAAGAGAATCCACGACTCGCTCAGAAGCTTCATGACGTGTTACTTGAAAGTGGTGTAGTTGCACCTCCTAACTTGTTTACCGAGGCATACCCTGACCAAATAGATGTTATTGTTGAGTCTAAGTCACCAACTGAAGACAAGGATCAAAGTAGAAAGGTGTCTGGTCTCTTCGAAAGTGTAGATAAAAAAGATCCTCGTGCAGCTAACTTTTTGCCTCCCTTGCCTCAACCCAGACTGCATTCTAAAGCAAGCCCTACCCATGGCCAACAACAGCATCTCAAACCTCTCGAACTCAACCTCTCTCTTGATTCAAGAGAAGCAGCCGGACAACCTATAGCCTTACCATTTGAGGTAACTCCGGCGAAGTATGGGAGAAATGTACCTGTTGCTGCTGCGGCAGCAGCTGCAGCAGCTGTTGTTGCATCATCAATGGTAGTAGCTGCATCAAAGAGTACTGATGCAAATCTTGAAATTCCTGTAGCAGCTGCTGCCACTGCCACTGCTGCTGCAGTGGTTGCAACAACTGCAGCAGTCAACAAGCAGTATGAGCAGGTTGAGGCTGATGCCGCTCTTTATGAGCAGCGTGGAAGTGGAGATAAGGAGCATGATGCTTATGGAGAAAATTCAGAAGGTGAACGAATATCAGATAGATCGGCAGGGAATGAAAGCACAAAATCAGATATCACCCTTGACGACGTTGCAGAATGCGAGATCCCATGGGAAGAAATCTCCGTGGGAGAGCGTATTGGACTTGGTTCATATGGGGAGGTCTATCGTGGAGATTGGCATGGAACTGAGGTAGCTGTGAAGAGGTTTCTAGACCAGGATATTTCTGGTGAATCTCTTGAAGAATTCAAAAGTGAGGTACGAATTATGAAAAGGCTTCGGCATCCAAATGTTGTTCTCTTCATGGGAGCTGTGACACGTGCTCCCAATCTTTCAATTGTTACAGAATTTCTTCCCAGAGGTAGCTTGTACAGGTTAATTCACCGTCCCAACAATCAATTAGATGAACGAAAGCGATTGAGGATGGCCCTTGATGCAGCTCGGGGAATGAATTATTTGCACAATTGCTCGCCTGTTATTGTACATCGTGATTTGAAGTCTCCAAATCTACTTGTTGATAAAAATTGGGTTGTGAAGGTATGTGATTTTGGTTTATCAAAAATGAAGCATAGCACATTTCTTTCTTCAAGGTCAACAGCTGGAACGGCTGAATGGATGGCCCCAGAAGTGTTGAGAAATGAACCTTCAGATGAGAAGTGTGACGTTTATAGTTATGGAGTCATACTATGGGAGCTTTCTACAATGCAACAACCATGGGGAGGAATGAACCCAATGCAAGTTGTTGGCGCTGTTGGCTTTCAGCATCGTCGTCTTGACATCCCAGACAATCTGGATCCTGCCATTGCTGACATTATTAGGAAATGCTGGCAAACAGATCCAAGATTAAGACCTTCGTTTGCCGAGATCATGGCTGCGCTAAAGCCGCTGCAGAAGCCAATGTCGAGTTCTCAAGTACCGAGACCAAATGCCCCTGCAGGTAGTGGTCGTGAGAAGGCTCGATTATTGCAAGTTGCCGAAGACCCATCAGGCTAG | 3036 | 45.65 | MKNLLKKFHIMSSGQSDDTAEGSTSSRGSKLIEVSSPDKLPSRSRPTHFNSEHKPFSGLSGWLNSVTNRRSPSPPSSSNPTAGEIMEPSDSVSSRDAAMDTSRHDSGSSNSRDPDIEEEYQIQLALEMSAREDPEAAQIEAVKQISLGSCDPDNTPAEVIAFRYWNYNSLSYDDKILDGFYDLYGVFTESTSERMPSLVDLQGAPMSDSVTWEAVLINKAADANLLKLEQTALEMAIKMRSESPVSVNSYLVRKLAVLVSDYMGGPVGDPEKMLRKWRNLSYSLKATLGSMVLPLGSLTVGLARHRALLFKLLADGVDIPCRLVKGPQYTGSDDVAMNFIKIDDGREYIVDLMADPGTLIPADVAGLHVEYDESPFSASPLSRDVDSSQAASSSSGVGSSLEENSDFGTSDRKPKSRNFSATKEYDPPNVDKGLSRDFASKPNYPGMHVRSPSWTEGVSSPAVRRMKVKDVSQYMIDAAKENPRLAQKLHDVLLESGVVAPPNLFTEAYPDQIDVIVESKSPTEDKDQSRKVSGLFESVDKKDPRAANFLPPLPQPRLHSKASPTHGQQQHLKPLELNLSLDSREAAGQPIALPFEVTPAKYGRNVPVAAAAAAAAAVVASSMVVAASKSTDANLEIPVAAAATATAAAVVATTAAVNKQYEQVEADAALYEQRGSGDKEHDAYGENSEGERISDRSAGNESTKSDITLDDVAECEIPWEEISVGERIGLGSYGEVYRGDWHGTEVAVKRFLDQDISGESLEEFKSEVRIMKRLRHPNVVLFMGAVTRAPNLSIVTEFLPRGSLYRLIHRPNNQLDERKRLRMALDAARGMNYLHNCSPVIVHRDLKSPNLLVDKNWVVKVCDFGLSKMKHSTFLSSRSTAGTAEWMAPEVLRNEPSDEKCDVYSYGVILWELSTMQQPWGGMNPMQVVGAVGFQHRRLDIPDNLDPAIADIIRKCWQTDPRLRPSFAEIMAALKPLQKPMSSSQVPRPNAPAGSGREKARLLQVAEDPSG | 1011 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 2144811 | 2157632 | + | Lag0024328.1 | Lac10g0283 | 582814 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lac10g0283 | 1011 | ProSitePatterns | Protein kinases ATP-binding region signature. | 728 | 749 | IPR017441 | GO:0005524(InterPro) | |
Lac10g0283 | 1011 | Gene3D | Transferase(Phosphotransferase) domain 1 | 801 | 986 | - | - | |
Lac10g0283 | 1011 | MobiDBLite | consensus disorder prediction | 519 | 538 | - | - | |
Lac10g0283 | 1011 | MobiDBLite | consensus disorder prediction | 673 | 699 | - | - | |
Lac10g0283 | 1011 | FunFam | Serine/threonine-protein kinase isoform 1 | 713 | 800 | - | - | |
Lac10g0283 | 1011 | MobiDBLite | consensus disorder prediction | 380 | 405 | - | - | |
Lac10g0283 | 1011 | SUPERFAMILY | Protein kinase-like (PK-like) | 705 | 972 | IPR011009 | - | |
Lac10g0283 | 1011 | MobiDBLite | consensus disorder prediction | 377 | 460 | - | - | |
Lac10g0283 | 1011 | ProSiteProfiles | Protein kinase domain profile. | 722 | 978 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Lac10g0283 | 1011 | MobiDBLite | consensus disorder prediction | 1 | 116 | - | - | |
Lac10g0283 | 1011 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 841 | 853 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Lac10g0283 | 1011 | MobiDBLite | consensus disorder prediction | 978 | 1011 | - | - | |
Lac10g0283 | 1011 | PRINTS | Tyrosine kinase catalytic domain signature | 945 | 967 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Lac10g0283 | 1011 | PRINTS | Tyrosine kinase catalytic domain signature | 796 | 809 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Lac10g0283 | 1011 | PRINTS | Tyrosine kinase catalytic domain signature | 882 | 892 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Lac10g0283 | 1011 | PRINTS | Tyrosine kinase catalytic domain signature | 901 | 923 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Lac10g0283 | 1011 | PRINTS | Tyrosine kinase catalytic domain signature | 835 | 853 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Lac10g0283 | 1011 | MobiDBLite | consensus disorder prediction | 673 | 707 | - | - | |
Lac10g0283 | 1011 | FunFam | Serine/threonine-protein kinase CTR1 | 801 | 984 | - | - | |
Lac10g0283 | 1011 | Gene3D | Phosphorylase Kinase; domain 1 | 715 | 799 | - | - | |
Lac10g0283 | 1011 | MobiDBLite | consensus disorder prediction | 9 | 32 | - | - | |
Lac10g0283 | 1011 | Pfam | Ethylene-responsive protein kinase Le-CTR1 | 157 | 360 | - | - | |
Lac10g0283 | 1011 | MobiDBLite | consensus disorder prediction | 97 | 116 | - | - | |
Lac10g0283 | 1011 | Pfam | Protein tyrosine and serine/threonine kinase | 723 | 974 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Lac10g0283 | 1011 | CDD | STKc_MAP3K-like | 728 | 974 | - | - | |
Lac10g0283 | 1011 | SMART | serkin_6 | 722 | 977 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Lac10g0283 | 1011 | PANTHER | SERINE-THREONINE PROTEIN KINASE | 68 | 975 | IPR050167 | GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER) | |
Lac10g0283 | 1011 | MobiDBLite | consensus disorder prediction | 51 | 88 | - | - | |
Lac10g0283 | 1011 | MobiDBLite | consensus disorder prediction | 544 | 570 | - | - | |
Lac10g0283 | 1011 | Coils | Coil | 654 | 674 | - | - | |
Lac10g0283 | 1011 | MobiDBLite | consensus disorder prediction | 406 | 420 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lac10g0283 | Lac-Chr10:2144811 | Lac2g0452 | Lac-Chr2:3325129 | 1.80E-190 | dispersed | |
Lac9g2194 | Lac-Chr9:41399966 | Lac10g0283 | Lac-Chr10:2144811 | 5.40E-73 | transposed | |
Lac1g2730 | Lac-Chr1:48509523 | Lac10g0283 | Lac-Chr10:2144811 | 4.90E-31 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
85622 | PF07714 | PK_Tyr_Ser-Thr | 7.30E-67 | CL0016 | Lac | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lac10g0283 | - | - | - | 0.0 |