Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lac10g0367 | ATGGAGGCTGCTGCTGCTTTTGGCCATCTAAGGCCTGTCGTCAAGACCGAGAAGCCTGCCGGAGATGGCGACGGGGACGGGGATTCTCCTTCGAAACAACGTCTCCTCGTTAAGATGGGGAAAAATTATGGAAAACAAGAGCATGAAACTGAAGATAAAACAACCAATTCATCTGATCAAAAGGATTTGAGCTGCACCAAACTTCAGGAAGATCAACTGGAATCCGCCCGAGCGGAAATGGGAGAAGTGAGAGAAGAAAACCAGAGACTAAAAATGAGTTTAAGCCAAATCATGAAGGATTACGAAGCCCTAAGAATGCAATTCCTTGGAATCGTCAGACGAGAAGGAAAGAAATTACCGGAAGACAATGACAAGTTGAACAATGAACAACGTCACAACGATGACGATCGAAACCAAACCGACGAAACAGAGCTCGTTTCACTGACTTTGGGGAGGTTTCCAATGGCGGAGAAGAATAAGAATAAGGTGGCGGACGAGAAAATAGATCAAAGCAATAAGAGTTCTCAAGGTCGAGAGATGATTGGTGAGGAACAGGGCGTTCAAGAGACTTTATCGCTCGGTTTGAACTGCAAATTCGAGCAGGAATCGACGACTGTTAAAGAAGTTGATTCTCCAAATCGGAGTCTGACAAATAGCTTCGATCATGAGGCGAAGGAGGAAGCTGGAGAGACGAGTTGGCCGCCAAGTAAAGGGGTGAAGACGATGAGAAGCGGCGATGATGATGTTGCACAGCAGAATCTGCCCAAGCGCGCTAGGGTTTGCGTTAGAGCGCGATGCGAAACAGCTACGATGAACGACGGATGCCAATGGAGAAAATACGGGCAAAAGATAGCGAAAGGAAACCCATGTCCACGAGCATACTATCGCTGCACAGGCTCACCGACCTGTCCCGTTCGCAAACAAGTCCAACGATGCGCCGACGACATGTCGATCTTAATCACCACCTACGAAGGCACCCACAACCACCAACTACCCGTCTCCGCCACCGCCATGGCCTCCACCACCTCCGCCGCTGCCTCCATGCTCCTCTCCGGCTCCTCCTCCTCCGCCACCGCAAATCTCCACGGCCTAAACTTCTACCTCAACAACCCAACAAATAACAACAACAATCCCAAACCCAATTTTTACTTACCCAACAACTCCTCCATCATCTCTTCAACTTCCCCAACTCATCCCACCATCACTTTAGACCTCACTTCAAATCCTTCCTCCTCTTCCACTTCCATCTCCGCCCATCTCGGAAAGTTCCCGACCGGGTTCTCCAATTCCCGGTACCCTTTCACGAGCCAGCTCGACTTCGGTTCTTCTAGAAACAATGTGCTGTCGTGGAATAACGGCCTTCTTAGTTACAACAGAAATAACAACCCCACTGCCACGTCGACCACCAATGCAATCTATCAAAACTACATCCAACAACAGCAGCAACGGAACAATAATCTTAATCATCACGGTGTCGTCGCTGCCGCTGCCACGTCACTGCCACATCAGCAGCAGCCTTTGCCCGACACCATCGCCGCCGCCACCAAGGCCATCACGGCCGACCCGAGCTTCCAGTCTGCTCTCGCTGCTGCTCTCACGTCGATCATTGGCACCGGCGCCGGCGCCGGTGCGATTAAGTCGTCGGCGAGAGGTGAACAGCCGTTGTTTCAGTTGACTTCCACGGCGGCGAGTAAAGGGAGTGGATGTGGGACGAGCTTTTTGGGTAATATTGCGGCGGCGACGGCGACGGCAACGGCGAGTAATTCGCCGCCGGCTGGGAATGTGGTGTTTGTGCCGGCGAGTTCGTTGCCGTTTTCGAATCCGAAGAGTGCGTCGGCGTCTCCGGGTGATCATATTGATCTTACCAATTGA | 1872 | 51.5 | MEAAAAFGHLRPVVKTEKPAGDGDGDGDSPSKQRLLVKMGKNYGKQEHETEDKTTNSSDQKDLSCTKLQEDQLESARAEMGEVREENQRLKMSLSQIMKDYEALRMQFLGIVRREGKKLPEDNDKLNNEQRHNDDDRNQTDETELVSLTLGRFPMAEKNKNKVADEKIDQSNKSSQGREMIGEEQGVQETLSLGLNCKFEQESTTVKEVDSPNRSLTNSFDHEAKEEAGETSWPPSKGVKTMRSGDDDVAQQNLPKRARVCVRARCETATMNDGCQWRKYGQKIAKGNPCPRAYYRCTGSPTCPVRKQVQRCADDMSILITTYEGTHNHQLPVSATAMASTTSAAASMLLSGSSSSATANLHGLNFYLNNPTNNNNNPKPNFYLPNNSSIISSTSPTHPTITLDLTSNPSSSSTSISAHLGKFPTGFSNSRYPFTSQLDFGSSRNNVLSWNNGLLSYNRNNNPTATSTTNAIYQNYIQQQQQRNNNLNHHGVVAAAATSLPHQQQPLPDTIAAATKAITADPSFQSALAAALTSIIGTGAGAGAIKSSARGEQPLFQLTSTAASKGSGCGTSFLGNIAAATATATASNSPPAGNVVFVPASSLPFSNPKSASASPGDHIDLTN | 623 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 2868922 | 2872387 | - | Lag0024412.1 | Lac10g0367 | 582898 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lac10g0367 | 623 | MobiDBLite | consensus disorder prediction | 117 | 144 | - | - | |
Lac10g0367 | 623 | MobiDBLite | consensus disorder prediction | 15 | 31 | - | - | |
Lac10g0367 | 623 | MobiDBLite | consensus disorder prediction | 1 | 70 | - | - | |
Lac10g0367 | 623 | MobiDBLite | consensus disorder prediction | 204 | 218 | - | - | |
Lac10g0367 | 623 | MobiDBLite | consensus disorder prediction | 158 | 173 | - | - | |
Lac10g0367 | 623 | PANTHER | WRKY TRANSCRIPTION FACTOR 36-RELATED | 48 | 538 | IPR044810 | GO:0003700(InterPro) | |
Lac10g0367 | 623 | Coils | Coil | 66 | 93 | - | - | |
Lac10g0367 | 623 | ProSiteProfiles | WRKY domain profile. | 266 | 332 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Lac10g0367 | 623 | Pfam | WRKY DNA -binding domain | 272 | 330 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Lac10g0367 | 623 | FunFam | probable WRKY transcription factor 31 | 256 | 333 | - | - | |
Lac10g0367 | 623 | SUPERFAMILY | WRKY DNA-binding domain | 264 | 332 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Lac10g0367 | 623 | SMART | WRKY_cls | 271 | 331 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Lac10g0367 | 623 | Gene3D | WRKY domain | 256 | 333 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Lac10g0367 | 623 | MobiDBLite | consensus disorder prediction | 117 | 142 | - | - | |
Lac10g0367 | 623 | MobiDBLite | consensus disorder prediction | 156 | 183 | - | - | |
Lac10g0367 | 623 | MobiDBLite | consensus disorder prediction | 41 | 70 | - | - | |
Lac10g0367 | 623 | MobiDBLite | consensus disorder prediction | 204 | 248 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lac10g0367 | Lac-Chr10:2868922 | Lac5g2527 | Lac-Chr5:43827611 | 1.60E-40 | dispersed | |
Lac10g0367 | Lac-Chr10:2868922 | Lac3g0633 | Lac-Chr3:4903828 | 1.70E-87 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
22723 | PF03106 | WRKY | 1.50E-23 | CL0274 | Lac | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lac10g0367 | - | - | - | 0.0 |