Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac10g0368 ATGCAAGGGATTGATGTGGACAACTCAATACCAGCCCAAGGAGATAGTCAGGAAATGAAATCCGAAGGAAGAACAGGCCAAACGGTCGGGCCAAAGCCGAAAGGATCGGGCTTATGGCACGACCCCCTGCTCGGCCAAGTAAGGCAGAGTAAGAAACCCTCTTTCCTCTTTGAGCTTCAGCAGCTTTGCATCGCATCTATCGATCTCTCTGGATCATGGCGCCGGTTTTGTCTCGGTTACTTCTCCGACGGAATCTTCAGACACCATTTTTTAGCGCCTCCATCGGATTTAACTCTTGCAGAAGTGGAGCAAATTTCAGGTTCTAAGCCAGGAGAAGTTCACAACTTGGTGCAGGGTAAATGGATTCAATCTTCTGGTTGGAATACTATTCTGGATCCTTTAAATGGAGAACCATTCATCAAAGTTGCCGAAGTCGATGAAACAGAAATTCAGCCATTTGTGAAGAGTCTGAACAAATGCCCCAAGCATGGCCTACATAATCCTTTCAAATCACCCGAGAGATACCTTATGTTTGGAGATGTATCTTCCAAGGCTGCCGACGTGCTTTCCAAGCCAGAGGTGACTGACTTTTTTGCAAGGTTGATTCAAAGAGTTTCTCCAAAAAGTTATCAACAAGCTTGTGCTGAAGTAAATGTTACTGTAAAATTTCTACGGAACTTCTCTGGTGATCAGGTTCGCTTCTTGGCAAGGTCCTTTGCCATACCCGGTGATCATCTTGGACAACACAGTCATGGTTTCCGTTGGCCTTATGGACCCGTTGCAATCATCACTCCTTTCAACTTTCCCTTGGAAATTCCTGTACTTCAGCTCATGGGTGCACTTTACATGGGCAACAAACCTGTTTTAAAAGTTGATAGCAAGGTTAGCATAGTTATGGAGCAAATGATTCGATTGCTTCATCATTGTGGGCTACCTCTAGAAGATTTGGATTTTATAAATTGTGATGGGAAGACAATGAACAGGTTCCTGCTGGAGGCAAATCCATCTATGACTCTTTTCACTGGTAGCTCAAGGGTGGCAGATAAGTTGGCCGTTGACTTGAAGGGCCGCATTAAATTGGAAGATGCAGGTTTTGATTGGAAAATCTTAGGACCAGATGTTCAAGAGGAAGATTATGTTGCATGGGTTTGTGATCAAGATGCATATGCTTGTAGTGGCCAGAAATGCTCAGCACAGTCGATACTGTTCATGCATGAGAATTGGTCGGCAACTTCACTTATTTCGAAGATAAAGGATCTTGCAGAGAGAAGAAATTTGACTGATTTAACGATTGGCCCAGTCCTTACATTCACTAATGAAATGATACTAGATCACATGAATAAGTTGCTCAAGATACCAGGGGCAAAGTTACTATTTGGAGGCGAACCTCTTAAAAACCATTCCATTCCACCAATATATGGTGCTATAAAACCCACTGCAGTATATATTCCGCTTGAAGAAATGATGAAAGATGACAATTATGAGCTTGTGACCAAAGAAATTTTTGGACCATTCCAGATTATTACTGAATATAAGAAAGATCAACTGTCAACCGTGTTGGATGCTCTTGAGCGTATGCATGCTCATCTAACCGCGGCTGTGGTTTCAAATGACCCTCTATTTTTGCAGGAAGTAATTGGGAATACTGTGAACGGAACGACATATGCCGGTTTACGAGCAAGAACAACTGGAGCTCCACAAAACCATTGGTTTGGACCAGCAGGAGATCCCAGAGGTGCAGGTATCGGGACCCCGGAAGCGATCAAACTCGTATGGTCTTGCCATAGAGAGATCATATATGACAATGGCCCGTTGCCCGCACACTGGACAATCCCACCATCGACTTGA 1848 43.89 MQGIDVDNSIPAQGDSQEMKSEGRTGQTVGPKPKGSGLWHDPLLGQVRQSKKPSFLFELQQLCIASIDLSGSWRRFCLGYFSDGIFRHHFLAPPSDLTLAEVEQISGSKPGEVHNLVQGKWIQSSGWNTILDPLNGEPFIKVAEVDETEIQPFVKSLNKCPKHGLHNPFKSPERYLMFGDVSSKAADVLSKPEVTDFFARLIQRVSPKSYQQACAEVNVTVKFLRNFSGDQVRFLARSFAIPGDHLGQHSHGFRWPYGPVAIITPFNFPLEIPVLQLMGALYMGNKPVLKVDSKVSIVMEQMIRLLHHCGLPLEDLDFINCDGKTMNRFLLEANPSMTLFTGSSRVADKLAVDLKGRIKLEDAGFDWKILGPDVQEEDYVAWVCDQDAYACSGQKCSAQSILFMHENWSATSLISKIKDLAERRNLTDLTIGPVLTFTNEMILDHMNKLLKIPGAKLLFGGEPLKNHSIPPIYGAIKPTAVYIPLEEMMKDDNYELVTKEIFGPFQIITEYKKDQLSTVLDALERMHAHLTAAVVSNDPLFLQEVIGNTVNGTTYAGLRARTTGAPQNHWFGPAGDPRGAGIGTPEAIKLVWSCHREIIYDNGPLPAHWTIPPST 615
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 2886101 2893032 + Lag0024413.1 Lac10g0368 582899
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac10g0368 615 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 365 556 IPR016163 GO:0016620(InterPro)
Lac10g0368 615 Pfam Aldehyde dehydrogenase family 129 556 IPR015590 GO:0016491(InterPro)
Lac10g0368 615 FunFam Aldehyde dehydrogenase 12 372 560 - -
Lac10g0368 615 PANTHER ALPHA-AMINOADIPIC SEMIALDEHYDE DEHYDROGENASE 112 609 IPR044638 GO:0003842(PANTHER)|GO:0004029(InterPro)|GO:0005739(PANTHER)|GO:0010133(PANTHER)
Lac10g0368 615 MobiDBLite consensus disorder prediction 1 24 - -
Lac10g0368 615 MobiDBLite consensus disorder prediction 1 37 - -
Lac10g0368 615 SUPERFAMILY ALDH-like 113 583 IPR016161 GO:0016491(InterPro)
Lac10g0368 615 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 389 400 IPR016160 GO:0016491(InterPro)
Lac10g0368 615 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 106 364 IPR016162 GO:0016491(InterPro)
Lac10g0368 615 FunFam probable aldehyde dehydrogenase 106 364 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac10g0368 Lac-Chr10:2886101 Lac3g1824 Lac-Chr3:20163066 1.10E-09 dispersed
Lac10g0368 Lac-Chr10:2886101 Lac7g1246 Lac-Chr7:11632268 4.50E-11 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac10g0368 K00294 - csv:101214440 1006.13