Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lac10g0368 | ATGCAAGGGATTGATGTGGACAACTCAATACCAGCCCAAGGAGATAGTCAGGAAATGAAATCCGAAGGAAGAACAGGCCAAACGGTCGGGCCAAAGCCGAAAGGATCGGGCTTATGGCACGACCCCCTGCTCGGCCAAGTAAGGCAGAGTAAGAAACCCTCTTTCCTCTTTGAGCTTCAGCAGCTTTGCATCGCATCTATCGATCTCTCTGGATCATGGCGCCGGTTTTGTCTCGGTTACTTCTCCGACGGAATCTTCAGACACCATTTTTTAGCGCCTCCATCGGATTTAACTCTTGCAGAAGTGGAGCAAATTTCAGGTTCTAAGCCAGGAGAAGTTCACAACTTGGTGCAGGGTAAATGGATTCAATCTTCTGGTTGGAATACTATTCTGGATCCTTTAAATGGAGAACCATTCATCAAAGTTGCCGAAGTCGATGAAACAGAAATTCAGCCATTTGTGAAGAGTCTGAACAAATGCCCCAAGCATGGCCTACATAATCCTTTCAAATCACCCGAGAGATACCTTATGTTTGGAGATGTATCTTCCAAGGCTGCCGACGTGCTTTCCAAGCCAGAGGTGACTGACTTTTTTGCAAGGTTGATTCAAAGAGTTTCTCCAAAAAGTTATCAACAAGCTTGTGCTGAAGTAAATGTTACTGTAAAATTTCTACGGAACTTCTCTGGTGATCAGGTTCGCTTCTTGGCAAGGTCCTTTGCCATACCCGGTGATCATCTTGGACAACACAGTCATGGTTTCCGTTGGCCTTATGGACCCGTTGCAATCATCACTCCTTTCAACTTTCCCTTGGAAATTCCTGTACTTCAGCTCATGGGTGCACTTTACATGGGCAACAAACCTGTTTTAAAAGTTGATAGCAAGGTTAGCATAGTTATGGAGCAAATGATTCGATTGCTTCATCATTGTGGGCTACCTCTAGAAGATTTGGATTTTATAAATTGTGATGGGAAGACAATGAACAGGTTCCTGCTGGAGGCAAATCCATCTATGACTCTTTTCACTGGTAGCTCAAGGGTGGCAGATAAGTTGGCCGTTGACTTGAAGGGCCGCATTAAATTGGAAGATGCAGGTTTTGATTGGAAAATCTTAGGACCAGATGTTCAAGAGGAAGATTATGTTGCATGGGTTTGTGATCAAGATGCATATGCTTGTAGTGGCCAGAAATGCTCAGCACAGTCGATACTGTTCATGCATGAGAATTGGTCGGCAACTTCACTTATTTCGAAGATAAAGGATCTTGCAGAGAGAAGAAATTTGACTGATTTAACGATTGGCCCAGTCCTTACATTCACTAATGAAATGATACTAGATCACATGAATAAGTTGCTCAAGATACCAGGGGCAAAGTTACTATTTGGAGGCGAACCTCTTAAAAACCATTCCATTCCACCAATATATGGTGCTATAAAACCCACTGCAGTATATATTCCGCTTGAAGAAATGATGAAAGATGACAATTATGAGCTTGTGACCAAAGAAATTTTTGGACCATTCCAGATTATTACTGAATATAAGAAAGATCAACTGTCAACCGTGTTGGATGCTCTTGAGCGTATGCATGCTCATCTAACCGCGGCTGTGGTTTCAAATGACCCTCTATTTTTGCAGGAAGTAATTGGGAATACTGTGAACGGAACGACATATGCCGGTTTACGAGCAAGAACAACTGGAGCTCCACAAAACCATTGGTTTGGACCAGCAGGAGATCCCAGAGGTGCAGGTATCGGGACCCCGGAAGCGATCAAACTCGTATGGTCTTGCCATAGAGAGATCATATATGACAATGGCCCGTTGCCCGCACACTGGACAATCCCACCATCGACTTGA | 1848 | 43.89 | MQGIDVDNSIPAQGDSQEMKSEGRTGQTVGPKPKGSGLWHDPLLGQVRQSKKPSFLFELQQLCIASIDLSGSWRRFCLGYFSDGIFRHHFLAPPSDLTLAEVEQISGSKPGEVHNLVQGKWIQSSGWNTILDPLNGEPFIKVAEVDETEIQPFVKSLNKCPKHGLHNPFKSPERYLMFGDVSSKAADVLSKPEVTDFFARLIQRVSPKSYQQACAEVNVTVKFLRNFSGDQVRFLARSFAIPGDHLGQHSHGFRWPYGPVAIITPFNFPLEIPVLQLMGALYMGNKPVLKVDSKVSIVMEQMIRLLHHCGLPLEDLDFINCDGKTMNRFLLEANPSMTLFTGSSRVADKLAVDLKGRIKLEDAGFDWKILGPDVQEEDYVAWVCDQDAYACSGQKCSAQSILFMHENWSATSLISKIKDLAERRNLTDLTIGPVLTFTNEMILDHMNKLLKIPGAKLLFGGEPLKNHSIPPIYGAIKPTAVYIPLEEMMKDDNYELVTKEIFGPFQIITEYKKDQLSTVLDALERMHAHLTAAVVSNDPLFLQEVIGNTVNGTTYAGLRARTTGAPQNHWFGPAGDPRGAGIGTPEAIKLVWSCHREIIYDNGPLPAHWTIPPST | 615 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 2886101 | 2893032 | + | Lag0024413.1 | Lac10g0368 | 582899 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lac10g0368 | 615 | Gene3D | Aldehyde Dehydrogenase; Chain A, domain 2 | 365 | 556 | IPR016163 | GO:0016620(InterPro) | |
Lac10g0368 | 615 | Pfam | Aldehyde dehydrogenase family | 129 | 556 | IPR015590 | GO:0016491(InterPro) | |
Lac10g0368 | 615 | FunFam | Aldehyde dehydrogenase 12 | 372 | 560 | - | - | |
Lac10g0368 | 615 | PANTHER | ALPHA-AMINOADIPIC SEMIALDEHYDE DEHYDROGENASE | 112 | 609 | IPR044638 | GO:0003842(PANTHER)|GO:0004029(InterPro)|GO:0005739(PANTHER)|GO:0010133(PANTHER) | |
Lac10g0368 | 615 | MobiDBLite | consensus disorder prediction | 1 | 24 | - | - | |
Lac10g0368 | 615 | MobiDBLite | consensus disorder prediction | 1 | 37 | - | - | |
Lac10g0368 | 615 | SUPERFAMILY | ALDH-like | 113 | 583 | IPR016161 | GO:0016491(InterPro) | |
Lac10g0368 | 615 | ProSitePatterns | Aldehyde dehydrogenases cysteine active site. | 389 | 400 | IPR016160 | GO:0016491(InterPro) | |
Lac10g0368 | 615 | Gene3D | Aldehyde Dehydrogenase; Chain A, domain 1 | 106 | 364 | IPR016162 | GO:0016491(InterPro) | |
Lac10g0368 | 615 | FunFam | probable aldehyde dehydrogenase | 106 | 364 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lac10g0368 | Lac-Chr10:2886101 | Lac3g1824 | Lac-Chr3:20163066 | 1.10E-09 | dispersed | |
Lac10g0368 | Lac-Chr10:2886101 | Lac7g1246 | Lac-Chr7:11632268 | 4.50E-11 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lac10g0368 | K00294 | - | csv:101214440 | 1006.13 |