Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac10g0377 ATGTGCAAGAAAATTCAAATGGGCATCTTCGTTTTCGTTTTCTCATCGATTTTACTATCAACCCTTTTCAGCTCTTGCACTCTTGCTCTTACTGCAGATGGCCTAACATTGTTGGAAATTAGAAGCGCTTTTAATGACAGCAAAAACCTCCTTGGTGATTGGGAAGCTTTTGATGAGTCTCCCTGCAAATGGACTGGTATATCTTGTCACCCTGAGGACCAACGGGTCAGCTCAATTAACTTACCTTACATGCAACTAGGAGGGATTATTTCTCCCAGCATTGGCAAACTCAGTAGATTACAGAGACTGGCACTTCACCAAAATGGCTTACATGGATATATTCCTGATGAAATCATCAAATGTACTCAGCTCAGAGCTCTGTATTTGAGGTCTAATTATCTCCAAGGTGGCATACCATCGGATATAGGAAATCTTTCTGCTCTTACAATACTGGATTTATCAAGCAATTCGTTGAAGGGTGCTATTCCATCATCCATTGGCCGTCTCTCACTTCTGCGCCATCTGAATTTGTCCACCAACTTTTTCTCTGGGGAGATTCCAGATTTTGGAATTCTCAGCACTTTTGGAAGCAATTCGTTCACTGGCAATCTAGATCTCTGTGGTCATCAAGTAAACAAGGCCTGCCGAACCTCATTGGGATTTCCTGCAGTATTGCCCCATGCTGAAAGTGATGAAGCTTCTGTTCCTGTGAAAAGACCTTCACACTACATCAAAGGGGTGTTAATTGGTGCAATGTCCACTATGGGTGTTGCACTTGTAGTGCTCGTTCCATTCTTGTGGATCCGATGGCTATCAAAGAAGGAAAGAGCTGCCAAGAGATACACAGAAGTCAAAAAGCAAGTGGTTCATGAGCCAAGCACAAAACTTATTACGTTTCATGGTGACCTACCATACCCATCATGTGAGATCATAGAAAAGCTGGAGTCACTAGATGAAGAAGACGTTGTTGGTTCAGGAGGATTTGGTATTGTATACCGAATGGTCATGAATGATTGTGGAACATTTGCTGTGAAAAAGATTGATGGAAGCAGAAAAGGTTCAGACCAAGTGTTTGAGAGAGAGTTGGAGATTTTGGGTTGCATCAAACATATAAACTTGGTCAATTTGCGGGGATACTGCAGTCTTCCAACTTCAAAGCTTCTTATCTATGATTTTCTAGCAATGGGCAGCTTAGATGATTTCTTGCATGAACAAGGACCAGAAAAGATGCCATTGGATTGGAAAGCTCGTCTAAGGATAGCCCTGGGCTCTGCTAGGGGGATTGCATACTTACATCATGATTGTTGTCCAAAAATCGTGCACCGTGATATTAAATCGAGTAACATTCTACTTGATGAGAACTTGGAGCCCCATGTATCTGACTTTGGACTTGCCAAGCTTTTGGTTGACGAGGATGCTCATGTCACAACTGTTGTTGCTGGAACATTTGGTTATTTGGCTCCAGAATACCTACAAAGTGGGAGGGCAACTGAAAAATCAGATGTTTATAGCTTTGGAGTTTTATTACTGGAGCTGGTGACTGGGAAGAGACCAACTGATCCATCATTTGTAAAGAGAGGCTTAAATGTTGTTGGTTGGATGCACACATTATTGGGAGAAAACAAAATGGATGAGATAGTTGACAAGAGGTGCAGGGACATCGATGTCGATACTGTAGAAGCAATTCTTGAAATAGCAGCCAAATGCACAGATGCCGACCCGGACAACCGGCCATCAATGAGTCAAGTTTTGCAGTTTCTTGAGCAAGAAGTCATGTCACCATGTCCTAGTGATTTCTACGAGTCTCATTCTGATTACTCTTGA 1824 42.32 MCKKIQMGIFVFVFSSILLSTLFSSCTLALTADGLTLLEIRSAFNDSKNLLGDWEAFDESPCKWTGISCHPEDQRVSSINLPYMQLGGIISPSIGKLSRLQRLALHQNGLHGYIPDEIIKCTQLRALYLRSNYLQGGIPSDIGNLSALTILDLSSNSLKGAIPSSIGRLSLLRHLNLSTNFFSGEIPDFGILSTFGSNSFTGNLDLCGHQVNKACRTSLGFPAVLPHAESDEASVPVKRPSHYIKGVLIGAMSTMGVALVVLVPFLWIRWLSKKERAAKRYTEVKKQVVHEPSTKLITFHGDLPYPSCEIIEKLESLDEEDVVGSGGFGIVYRMVMNDCGTFAVKKIDGSRKGSDQVFERELEILGCIKHINLVNLRGYCSLPTSKLLIYDFLAMGSLDDFLHEQGPEKMPLDWKARLRIALGSARGIAYLHHDCCPKIVHRDIKSSNILLDENLEPHVSDFGLAKLLVDEDAHVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPSFVKRGLNVVGWMHTLLGENKMDEIVDKRCRDIDVDTVEAILEIAAKCTDADPDNRPSMSQVLQFLEQEVMSPCPSDFYESHSDYS 607
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 2941527 2946130 - Lag0024422.1 Lac10g0377 582908
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac10g0377 607 Pfam Leucine rich repeat N-terminal domain 32 69 IPR013210 -
Lac10g0377 607 Gene3D Transferase(Phosphotransferase) domain 1 393 596 - -
Lac10g0377 607 ProSitePatterns Protein kinases ATP-binding region signature. 323 346 IPR017441 GO:0005524(InterPro)
Lac10g0377 607 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 393 598 - -
Lac10g0377 607 Gene3D Phosphorylase Kinase; domain 1 276 392 - -
Lac10g0377 607 SUPERFAMILY L domain-like 32 208 - -
Lac10g0377 607 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 30 192 - -
Lac10g0377 607 SMART serkin_6 317 592 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac10g0377 607 ProSiteProfiles Protein kinase domain profile. 317 592 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac10g0377 607 SUPERFAMILY Protein kinase-like (PK-like) 297 588 IPR011009 -
Lac10g0377 607 Gene3D Ribonuclease Inhibitor 31 217 IPR032675 -
Lac10g0377 607 Pfam Protein kinase domain 320 585 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac10g0377 607 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 26 - -
Lac10g0377 607 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 187 590 IPR050647 -
Lac10g0377 607 Pfam Leucine Rich Repeat 123 145 IPR001611 GO:0005515(InterPro)
Lac10g0377 607 Pfam Leucine Rich Repeat 148 169 IPR001611 GO:0005515(InterPro)
Lac10g0377 607 Pfam Leucine Rich Repeat 172 188 IPR001611 GO:0005515(InterPro)
Lac10g0377 607 ProSitePatterns Serine/Threonine protein kinases active-site signature. 439 451 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac10g0377 Lac-Chr10:2941527 Lac2g2300 Lac-Chr2:31343464 3.00E-76 dispersed
Lac8g2246 Lac-Chr8:40746527 Lac10g0377 Lac-Chr10:2941527 1.90E-51 dispersed
Lac8g2839 Lac-Chr8:45589580 Lac10g0377 Lac-Chr10:2941527 1.90E-51 dispersed
Lac2g0989 Lac-Chr2:7826581 Lac10g0377 Lac-Chr10:2941527 2.40E-133 transposed
Lac2g1122 Lac-Chr2:8921133 Lac10g0377 Lac-Chr10:2941527 1.00E-80 transposed
Lac5g2273 Lac-Chr5:41421748 Lac10g0377 Lac-Chr10:2941527 1.80E-133 transposed
Lac10g0377 Lac-Chr10:2941527 Lac3g0639 Lac-Chr3:4952665 3.40E-229 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85626 PF00069 Pkinase 2.20E-47 CL0016 Lac PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac10g0377 - - - 0.0