Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac10g0453 ATGCAGAGCTCTGCGGTTACTTTCTCGCCTTCTCTTCCTCTTCTCAAGCCTCGGCGGCCGTCCACTTCGTCCTTCAGCTCTGGATGTAACTCAATTCGGCTGTCTTCTTCGCCTTCCTCGAATTCCAGAGATCTCGGAGACCTGAACAATGTTGGCCTCCCTTCCTCTTGGCCCCGGCGATCTTGGACTCTATCGTCGTCTCCTTTTTCGTCCTCCAAACTCCGGCCATGGACCGGTGTGCCCTTGCTTGCTTCGGATTCCGATGCGAGTCATTTCAAGGTTCAGGCCACTGCGGTGCCCGATAGCTCGGGGGAGTCCACCAGTGCTGGCGGTAACCTGATGAAAACGTTGGAGCTCGGGTCGTTGTTTGGCCTCTGGTACCTTTTCAACATCTACTTTAACATCTACAATAAGCAGGTTCTCAAGGTGTTTCCGTTCCCTGTAACTGTCACTGCAGTTCAATTTGCTGTAGGCACTGTACTTGTTCTTCTTATGTGGGGACTTAATCTCTACAAAAAGCCAAAGATTAGTGGTGCTCAGCTTGCAGCTATTCTGCCGTTGGCATTTGTTCACACATTGGGAAATCTTTTTACAAATATGAGTCTTGGGAAAGTGGCGGTATCATTCACTCACACAATCAAAGCTTCGGAGCCATTTTTTTCAGTTATCCTGTCAGCAATGTTTCTTGGAGAGACTCCTACTCCCTGGGTAGTTGCATCCCTTCTGCCAATTGTTGGTGGTGTTGGATTGGCATCTGCCACTGAGGCCTCCTTCAACTGGGCTGGATTTTGGAGTGCAATGGCATCCAATTTGACCAATCAATCTCGTAATGTCCTTAGCAAAAAGGTCATGGTGAAAAAAGATGATTCAATTGACAACATCACCCTCTTTTCAGTTATAACAGTCATGTCCTTTTTCTTATTGTCCCCTGTGGCTATCTTCATGGAAGGTGTCAAGTTCACTCCTGCATACCTTCAATCAGCTGGATTGAACGTAAAACAAGTATACCTCAGGTCTCTTCTTGCCGCCCTTTGTTTCCATGCATACCAACAGGTTTCTTACATGATATTGCAAAGAGTATCGCCTGTTACCCACTCAGTAGGCAATTGTGTAAAGCGTGTTGTGGTCATCGTGAGCTCTGTTATCTTCTTCCAAACACCTGTTTCTCCGATCAACTCTCTTGGCACTGGAATAGCTCTTGCTGGGGTTTTCCTGTATTCGAGGGTTAAGCGCATCAAAGCTAAGCCGAAGACGGCTTAA 1260 47.3 MQSSAVTFSPSLPLLKPRRPSTSSFSSGCNSIRLSSSPSSNSRDLGDLNNVGLPSSWPRRSWTLSSSPFSSSKLRPWTGVPLLASDSDASHFKVQATAVPDSSGESTSAGGNLMKTLELGSLFGLWYLFNIYFNIYNKQVLKVFPFPVTVTAVQFAVGTVLVLLMWGLNLYKKPKISGAQLAAILPLAFVHTLGNLFTNMSLGKVAVSFTHTIKASEPFFSVILSAMFLGETPTPWVVASLLPIVGGVGLASATEASFNWAGFWSAMASNLTNQSRNVLSKKVMVKKDDSIDNITLFSVITVMSFFLLSPVAIFMEGVKFTPAYLQSAGLNVKQVYLRSLLAALCFHAYQQVSYMILQRVSPVTHSVGNCVKRVVVIVSSVIFFQTPVSPINSLGTGIALAGVFLYSRVKRIKAKPKTA 419
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 3570935 3574194 - Lag0024498.1 Lac10g0453 582984
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac10g0453 419 MobiDBLite consensus disorder prediction 1 45 - -
Lac10g0453 419 SUPERFAMILY Multidrug resistance efflux transporter EmrE 162 252 - -
Lac10g0453 419 SUPERFAMILY Multidrug resistance efflux transporter EmrE 331 410 - -
Lac10g0453 419 PANTHER SOLUTE CARRIER FAMILY 35 115 408 IPR050186 GO:0005794(PANTHER)|GO:0015297(PANTHER)
Lac10g0453 419 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 117 417 IPR004696 GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0055085(InterPro)
Lac10g0453 419 Pfam Triose-phosphate Transporter family 118 407 IPR004853 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac10g0453 Lac-Chr10:3570935 Lac7g0352 Lac-Chr7:2718983 5.90E-63 dispersed
Lac10g0453 Lac-Chr10:3570935 Lac8g2577 Lac-Chr8:43434270 1.30E-115 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac10g0453 K15283 - csv:101203848 710.679