Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac10g0481 ATGGCATCATCATCAACAACAACAACAAGCCAAGCCCATTACTACAGCCCTTGTGCAGCCTGCAAATTCCTAAGAAGAAAGTGCTTACCAGGATGTGTTTTTGCGCCATATTTCCCACCAGAGGAACCCCAAAAGTTCGCCAATGTCCACAAGGTTTTTGGAGCCAGCAACGTGGCCAAGCTTCTCAACGAAGTGCTTCCTCACCAAAGACAAGACGCCGTCGTTTCACTCGCCTATGAAGCCGAGGCCAGAATCAGAAACCCTGTTTATGGCTGCGTTGGTGCAATTTCCTTCCTCCAAAAACAGGTCCAAAGGCTCCAAAAGGAACTCGACGCCGCTAAAGCTCGCCTTTTTCTCTACTCTTGCACTGATTTTTCAACTCCCTTTTCATCTCAGCCTCAGATTCTCAGTCCTTGGAATCATAATGATGTCGTTTCTGCTAATTCTTCTTCTGTGTATTTCAGTACTGATTTTGAAGGAAGGTTCATGTGA 492 46.14 MASSSTTTTSQAHYYSPCAACKFLRRKCLPGCVFAPYFPPEEPQKFANVHKVFGASNVAKLLNEVLPHQRQDAVVSLAYEAEARIRNPVYGCVGAISFLQKQVQRLQKELDAAKARLFLYSCTDFSTPFSSQPQILSPWNHNDVVSANSSSVYFSTDFEGRFM 163
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 3716999 3717490 - Lag0024526.1 Lac10g0481 583012
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac10g0481 163 Coils Coil 96 116 - -
Lac10g0481 163 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 16 122 - -
Lac10g0481 163 ProSiteProfiles LOB domain profile. 16 117 IPR004883 -
Lac10g0481 163 Pfam Lateral organ boundaries (LOB) domain 17 114 IPR004883 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac10g0481 Lac-Chr10:3716999 Lac8g0240 Lac-Chr8:2655989 5.50E-49 dispersed
Lac10g0481 Lac-Chr10:3716999 Lac3g0157 Lac-Chr3:1085354 2.80E-53 wgd
Lac10g0481 Lac-Chr10:3716999 Lac8g2566 Lac-Chr8:43367021 2.80E-45 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
22730 PF03195 LOB 5.70E-42 No_clan Lac TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac10g0481 - - - 0.0