Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lac10g0496 | ATGTCTCAGGATATGTCATTGGATCAAGACCTGGATGAATCTGATCCCGAATTCGTGGAGATTGATCCTACTGGTCGATATGGACGGGCAAATGTGGTATTTAGATATCGGGCTTTTGATGAGTTGGAAGGAATTGAAGTAGCTTGGAATCAGGTTAAGGTAACAGATCTATTGCGGAACTCTGAAGATTTGGAGCGACTCTATTCAGAAGTTCATTTGCTAAAAACATTGAAGCACAAGAACATAATCAAATTTTACAATTCATGGGTTGATACGAAAAATGAAAACATCAACTTCATTACCGAGATATTCACTTCAGGGACACTACGGCAATATAGAAAGAAACACAAGCATGTTGATGTGAGAGCACTGAAAAAATGGTCAAGGCAGATACTAGAGGGCCTTCTGTATCTTCATAGCCATGACCCTCCAGTCATACATAGAGATTTGAAATGTGACAATATCTTTGTCAATGGCAACCAAGGTGAGGTGAAAATTGGTGACCTAGGACTCGCGGCCATTCTTCAGCAAGCTCGTTCAGCTCACAGTGTCATCGGGACTCCAGAGTTTATGGCTCCAGAGCTGTATGAGGAGGAATATAATGAGCTTGTGGATATTTATGCCTTTGGCATGTGTTTGCTTGAGCTTGTGACTTTTGAATATCCATATATTGAATGTGCAAATGCTGCTCAAATATATAAGAAGGTCACATCAGGGATAAAGCCAGCTTCATTGGCAAAAGTTACCGATGGAGGGGTTAGAGCATTTATAGAAAAATGTATTGCAAATGTTTCCGATCGCTTGCCTGCAAAAGATCTTTTAAGGGATCCATTTCTCCGAGCAGATGATGATCATGAAAGTCTAGCTCGTCATTTACAACCCAAGATACATCATACAGAAAAAGAGCATACTGATATTGATAGAAGTGTAGAGGATACTTCTGCTGAAACTAGCAGAGACTACAGTATGCATGGTCAGAGAAAAGATGTTAACAAGATATTTCTCAAACTACGAATTGCAGACTCAATGGGTAATTTTCGCAATATCCATTTTCCGTTTGATATTGAAGCCGACACAGCAATTTCTGTTGCCAGTGAAATGGTTGAGGAGTTGGACCTTTCAGATCAAGATGTCTCCACGATTTCTGAAATGATTGAAACAGAAATTAGGTCTTATATTCCAGATTGGACATCAGTTGACTATTCTGCAGATAATGTAGATAATGCAAGAACAGATGTTGCGGTTTCAGATAGCTCTACGTCTGAAACAAGGAATGCTGCCTCTCCCTTGTCTATTGAATCTAACAACCTTGCATTAGAGGTAATGCCTTCAGGGCGCAAGTATTGGTCTGATTCTCCAAAGGGAATGGGTGGGTGCTCTCCTATTAAGCCGCCAGGTCCTTCAAATTTGTCTTTTATCTTGGATCATAATGTTGAATCTTCTAGCAGCGATTTGCATGGGGATAATCTAGATCATGATGCTATAATCAAGGGACTAGAAAGTGAGCTCTTGTCTGAGGATGCTGCTAATGATGGGCAGGATCTTCATGCTAGTTTTGGGACACATCCTCCAGAAGAGAACAGTGAAGTTTCAAAACATGATGGACCAGTTGAGGTTGAGATAATGACGGAAAAACTTGAAAATTTGTTGACACAACAACAAAAAGAATTAGATGAACTAAAGAAGAAACATAAATCAGCTATTTCAGAACTTCTGACTAAAGTTACACCTGAGTCCTACCAGAAGGTTATAGGAATGTGTAAGCTAAAGCATTCTGATTTTGATCTGGTTCCCTAA | 1797 | 39.79 | MSQDMSLDQDLDESDPEFVEIDPTGRYGRANVVFRYRAFDELEGIEVAWNQVKVTDLLRNSEDLERLYSEVHLLKTLKHKNIIKFYNSWVDTKNENINFITEIFTSGTLRQYRKKHKHVDVRALKKWSRQILEGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILQQARSAHSVIGTPEFMAPELYEEEYNELVDIYAFGMCLLELVTFEYPYIECANAAQIYKKVTSGIKPASLAKVTDGGVRAFIEKCIANVSDRLPAKDLLRDPFLRADDDHESLARHLQPKIHHTEKEHTDIDRSVEDTSAETSRDYSMHGQRKDVNKIFLKLRIADSMGNFRNIHFPFDIEADTAISVASEMVEELDLSDQDVSTISEMIETEIRSYIPDWTSVDYSADNVDNARTDVAVSDSSTSETRNAASPLSIESNNLALEVMPSGRKYWSDSPKGMGGCSPIKPPGPSNLSFILDHNVESSSSDLHGDNLDHDAIIKGLESELLSEDAANDGQDLHASFGTHPPEENSEVSKHDGPVEVEIMTEKLENLLTQQQKELDELKKKHKSAISELLTKVTPESYQKVIGMCKLKHSDFDLVP | 598 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 3798994 | 3802406 | - | Lag0024541.1 | Lac10g0496 | 583027 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lac10g0496 | 598 | Coils | Coil | 539 | 570 | - | - | |
Lac10g0496 | 598 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 145 | 157 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Lac10g0496 | 598 | Gene3D | - | 331 | 414 | - | - | |
Lac10g0496 | 598 | MobiDBLite | consensus disorder prediction | 512 | 532 | - | - | |
Lac10g0496 | 598 | PANTHER | SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED | 13 | 568 | IPR050588 | GO:0004674(PANTHER)|GO:0005737(PANTHER)|GO:0006468(PANTHER)|GO:0035556(PANTHER) | |
Lac10g0496 | 598 | Gene3D | Transferase(Phosphotransferase) domain 1 | 104 | 286 | - | - | |
Lac10g0496 | 598 | ProSiteProfiles | Protein kinase domain profile. | 16 | 279 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Lac10g0496 | 598 | FunFam | probable serine/threonine-protein kinase WNK9 | 104 | 284 | - | - | |
Lac10g0496 | 598 | Pfam | Oxidative-stress-responsive kinase 1 C-terminal domain | 335 | 389 | IPR024678 | GO:0004674(InterPro)|GO:0005524(InterPro) | |
Lac10g0496 | 598 | FunFam | Probable serine/threonine-protein kinase WNK1 | 12 | 102 | - | - | |
Lac10g0496 | 598 | Gene3D | Phosphorylase Kinase; domain 1 | 12 | 102 | - | - | |
Lac10g0496 | 598 | Pfam | Protein kinase domain | 36 | 279 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Lac10g0496 | 598 | CDD | STKc_WNK | 26 | 279 | - | - | |
Lac10g0496 | 598 | SUPERFAMILY | Protein kinase-like (PK-like) | 36 | 324 | IPR011009 | - | |
Lac10g0496 | 598 | MobiDBLite | consensus disorder prediction | 290 | 322 | - | - | |
Lac10g0496 | 598 | SMART | serkin_6 | 18 | 279 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lac10g0496 | Lac-Chr10:3798994 | Lac12g2279 | Lac-Chr12:39919600 | 2.90E-132 | dispersed | |
Lac10g0496 | Lac-Chr10:3798994 | Lac2g0245 | Lac-Chr2:1855606 | 7.70E-08 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
85631 | PF00069 | Pkinase | 7.90E-45 | CL0016 | Lac | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lac10g0496 | K08867 | - | csv:101206177 | 991.104 |