Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac10g0582 ATGGCGACGACGACCACCAGTCTTGGCGGCGGCGGCGGCGGCGGCGGTGGTGGTGCAGAGGATAGAGTTATGGCTACCGCTCAGCAGATAGTCAAGAGCCTCAACACCCCGAAGGAGGTTCGAGACGACATGCTTTTGATCTTCTCTAGTTTCGACAATCGTCTCTCTAATATCACCAGTTTGGTCAACAGTGGGGATTCGAAGAGAGAGGCGGATCGATTTGAAGCTGCTGAGAAGGTGATTCTTCGGTGGGATTCTGGTCATGGAGCTTCTAGGAACTCCCTTTATTGGGAGGACTCGCCGGATGAGGCGGCTGAGTATTTATCGGCGGTTGATGATATCATTCAGTGGATCGACGACTTGTCAATTCGTTCTGATTCGGCTGAGATCGTCGACCGTGCTGAGAACGCGATCCAGATCGCTATGTCGAGGCTTGAGGACGAGTTTCGTCATATGTTGATTCGGAGCACCGTTCCTTTCGATGCTGAGCACCTCTATGGTTCAATTCGGAGGGTTTCCCTCTCTTTCGCTTCACACGACGAAAATTCCGATGAATTTGAGTCGTTTGCCGATGCTGACCGTGGTTCGGGAATTTTCCATGAGCGTGGTGTCAGTTTGGGTGATGATTTGCGGGTCGATTTGATCCATCCTGACGCCGTCGATGATTTGAAAGAGATCGCCGACCGGATGATTCGGTCTGGATACGAAAAAGAGTGTGTTAATGCCTATACTGGTGTCCGACGCGATGCTTTAGATGAGTGCTTGGTGGTTCTTGGAGTTGAGAAGCTAAGTATTGAGGATGTCCAGAAAATTGACTGGAAAATTTTGGACGAGAAAATGAAGAAATGGATCCAAGCTGTGAAGGTCAGTGTTCGAGTACTTTTGACGGGCGAGAAGCGATTGTGTGACTATATCTTTAGTGGGTCTGATGACTCTGAAGAAGTTTGTTTCAATGAGACTGCAAAAGGATGCATCCGGCAATTACTGAATTTTGCAGAGGCCATTGCTATAGGGGAAAGGTCAGTGGAGAAGCTATTTCGTATCCTTGATATGTATGAAGCTCTGGCATACGTTTTACCAGACTTGCAGGCTATGGTCACTGATGAATTTGTGATCGAGGAGGCGAAAGGAGTGCTTTCTAGGCTGGGAGAGGCCGCGAAAGGTACATTTGTTGAATTTGAGAATGCTGTTCGAAGTGAGACTTCTAAGAAAACAATGTTAAATGCTGAGATTCACCCGCTCACTCGTTATGTGATGAATTACTTACGATTGCTGGTGGTTTATAGTAAGACTCTGGATGAACTTTTAGAAGGCGAGGATGAGGATTTGCATCATCTAGGTGATGATGGTGCTGACAATTTGGAGTTAGAAACTATGTCTCCTTTAGCTCGTCGACTGTTTTCATTGATATCATCTCTGGAGACGAATCTTGAGAGAAAATCCAAACTTTATGGTGATGATTCTATACAATATATATTTCTCATGAATAATATACAATACATCGTGCAGAAAGTGAAAGATTCTGAGCTTGGAAAGCTCTTGGGTGACCGCTGGGTTCGCAAGCGCCGAGGCCAAGTTCGCATATATGCAACGAATTATCTCAGGGCTTCTTGGGGCAAACTATTATCTTTCTTGAAGGAAGAAGGTACTGGTGGGAGCTCCAATAGTGCCCTGAAACTAGCTACTTTAAAGGAAAAATTCAAAAATTTCAATGCTGGCTTTGAGGAAACCTATAGAATTCAGACAGCTTGGAAGGTTGCAGATGCTCAACTACGAGAAGAGCTCCGAATTTCAGTATCTGCAAAGGTGTTGCCTGCATATCGTGCCTTCTTGGGAAGACATGGAAGTCAGTTAGAGAATACAAGACATCCTGGGAGGTATATAAAGTACACATCGGATGACTTGGAGAACTATTTATTGGATTTGTTTGAAGGATCACCTTGTGTTATACACCACTTACGAAGAAAAAGTAGTTCATAG 1980 45.3 MATTTTSLGGGGGGGGGGAEDRVMATAQQIVKSLNTPKEVRDDMLLIFSSFDNRLSNITSLVNSGDSKREADRFEAAEKVILRWDSGHGASRNSLYWEDSPDEAAEYLSAVDDIIQWIDDLSIRSDSAEIVDRAENAIQIAMSRLEDEFRHMLIRSTVPFDAEHLYGSIRRVSLSFASHDENSDEFESFADADRGSGIFHERGVSLGDDLRVDLIHPDAVDDLKEIADRMIRSGYEKECVNAYTGVRRDALDECLVVLGVEKLSIEDVQKIDWKILDEKMKKWIQAVKVSVRVLLTGEKRLCDYIFSGSDDSEEVCFNETAKGCIRQLLNFAEAIAIGERSVEKLFRILDMYEALAYVLPDLQAMVTDEFVIEEAKGVLSRLGEAAKGTFVEFENAVRSETSKKTMLNAEIHPLTRYVMNYLRLLVVYSKTLDELLEGEDEDLHHLGDDGADNLELETMSPLARRLFSLISSLETNLERKSKLYGDDSIQYIFLMNNIQYIVQKVKDSELGKLLGDRWVRKRRGQVRIYATNYLRASWGKLLSFLKEEGTGGSSNSALKLATLKEKFKNFNAGFEETYRIQTAWKVADAQLREELRISVSAKVLPAYRAFLGRHGSQLENTRHPGRYIKYTSDDLENYLLDLFEGSPCVIHHLRRKSSS 659
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 4476452 4478431 - Lag0024627.1 Lac10g0582 583113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac10g0582 659 SUPERFAMILY Cullin repeat-like 71 644 IPR016159 -
Lac10g0582 659 MobiDBLite consensus disorder prediction 1 20 - -
Lac10g0582 659 Gene3D Exocyst complex component Exo70 88 649 - -
Lac10g0582 659 Pfam Exo70 exocyst complex subunit C-terminal 281 641 IPR046364 GO:0000145(InterPro)|GO:0005546(InterPro)|GO:0006887(InterPro)
Lac10g0582 659 FunFam Exocyst subunit Exo70 family protein 90 651 - -
Lac10g0582 659 PANTHER EXOCYST COMPLEX PROTEIN EXO70 29 646 IPR004140 GO:0000145(InterPro)|GO:0000145(PANTHER)|GO:0006887(PANTHER)|GO:0006887(InterPro)
Lac10g0582 659 Pfam Exocyst complex component Exo70 N-terminal 74 154 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac10g0582 Lac-Chr10:4476452 Lac13g0596 Lac-Chr13:4412545 1.10E-92 dispersed
Lac10g0148 Lac-Chr10:1122317 Lac10g0582 Lac-Chr10:4476452 1.60E-104 transposed
Lac12g2533 Lac-Chr12:42209252 Lac10g0582 Lac-Chr10:4476452 7.00E-125 transposed
Lac4g0533 Lac-Chr4:12131319 Lac10g0582 Lac-Chr10:4476452 9.10E-119 transposed
Lac6g0241 Lac-Chr6:1967922 Lac10g0582 Lac-Chr10:4476452 5.70E-29 transposed
Lac7g2884 Lac-Chr7:47942878 Lac10g0582 Lac-Chr10:4476452 3.90E-111 transposed
Lac10g0582 Lac-Chr10:4476452 Lac3g0086 Lac-Chr3:577593 6.70E-255 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac10g0582 K07195 - csv:101212753 1167.14