Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac10g0621 ATGAAATCGGGTGTCTTGTTCCCTGTTCTTGTTGTCCTCGTTCTGGGCTCGGCCGTCGTGTCGTGGGCCGACAAAGATAATTTCGAGGACGACGGCGAAGAATTCTCCAGCCTTGAGGTTCCGCAGTTGCAGGAATTTTCACCTTTCGACGACTTTCTTTCGTATGGGTTCTACCGGAAAAGTTGCCCCGACGTCGACAAAATCATTCACCGCAAACTCAAGCAGTGGTTCGATAAAGATAACACCATCGCCGCCGGCATCATCAGACTCCACTTCCATGACTGCGTCGTCAGGGGCTGTGACGCTTCCATTCTTCTGGACTACGAGGGAAGCGAGAGGAGGGCTCCGGCGAGCAAGACGTTGAGAGGGTTCGAAGTGATTGATGATATTAAAGCCGAGTTAGAGAAAAAGTGCCCCAAAACAGTTTCTTGCGCAGATATTCTGACGGTCGCCGCCAGAGAAGCCACCATTCTCGTGGGCGGCCCATATTGGATGGTCCCTTATGGAAGAAGAGATGGCGTGGATTCCATTGGCGAAGAAACTGGATTGGTTCCAATGGGTTTTGAAGACATCACTTATCTCATTGAACGATACCAATCTCTCGGCTTAAATCTCGTAGATTTGGTCGTTCTTTCAGGGGCACATACGATTGGAAGGGCAACATGCGGAGTGGTTCAAAACAGGCTTTACAACTACAGCGCAACGGGGAAACCAGACCCATCACTGAGCCCAAAATACTTGAACTTCTTGAGAAGAAAATGCCGATGGGCCTCCGATTACGTGGACCTCGACGCCACGACGCCCAAGAAATTCGACAACGCCTACTACACCAACCTTCCCAAAAAGATGGGTCTTTTGTCGACCGACTCGGCTCTCTACACCGACCCAAGAACTTCCCCCATCGTCAAAGCCTTGGCCTATCAGCCCTCCATTTTCCGCCAACAGTTTGCTGTGTCCATGGCCAAGCTCGGCAATGTTCAAGTTCTCACTGATCTTTTCGAAGGCCAGATTCGAATCAACTGCAGTTGTAGGAATTCTCCTTGA 1044 50.48 MKSGVLFPVLVVLVLGSAVVSWADKDNFEDDGEEFSSLEVPQLQEFSPFDDFLSYGFYRKSCPDVDKIIHRKLKQWFDKDNTIAAGIIRLHFHDCVVRGCDASILLDYEGSERRAPASKTLRGFEVIDDIKAELEKKCPKTVSCADILTVAAREATILVGGPYWMVPYGRRDGVDSIGEETGLVPMGFEDITYLIERYQSLGLNLVDLVVLSGAHTIGRATCGVVQNRLYNYSATGKPDPSLSPKYLNFLRRKCRWASDYVDLDATTPKKFDNAYYTNLPKKMGLLSTDSALYTDPRTSPIVKALAYQPSIFRQQFAVSMAKLGNVQVLTDLFEGQIRINCSCRNSP 347
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 4761504 4764786 + Lag0024666.1 Lac10g0621 583152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac10g0621 347 ProSiteProfiles Plant heme peroxidase family profile. 52 345 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac10g0621 347 FunFam Peroxidase 56 194 - -
Lac10g0621 347 PRINTS Haem peroxidase superfamily signature 84 98 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac10g0621 347 PRINTS Haem peroxidase superfamily signature 264 279 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac10g0621 347 PRINTS Haem peroxidase superfamily signature 160 172 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac10g0621 347 PRINTS Haem peroxidase superfamily signature 142 159 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac10g0621 347 PRINTS Haem peroxidase superfamily signature 207 222 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac10g0621 347 PRINTS Plant peroxidase signature 141 151 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac10g0621 347 PRINTS Plant peroxidase signature 318 331 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac10g0621 347 PRINTS Plant peroxidase signature 262 277 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac10g0621 347 PRINTS Plant peroxidase signature 278 295 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac10g0621 347 PRINTS Plant peroxidase signature 160 175 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac10g0621 347 PRINTS Plant peroxidase signature 62 81 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac10g0621 347 PRINTS Plant peroxidase signature 122 135 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac10g0621 347 PRINTS Plant peroxidase signature 86 106 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac10g0621 347 PRINTS Plant peroxidase signature 206 218 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac10g0621 347 FunFam Peroxidase 185 323 - -
Lac10g0621 347 Gene3D - 56 345 - -
Lac10g0621 347 SUPERFAMILY Heme-dependent peroxidases 53 345 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac10g0621 347 ProSitePatterns Peroxidases active site signature. 84 95 IPR019794 GO:0004601(InterPro)
Lac10g0621 347 Pfam Peroxidase 71 306 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac10g0621 347 CDD secretory_peroxidase 53 342 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Lac10g0621 347 PANTHER PEROXIDASE 25-RELATED 54 341 IPR000823 GO:0004601(InterPro)|GO:0004601(PANTHER)|GO:0006950(PANTHER)|GO:0006979(InterPro)|GO:0009505(PANTHER)|GO:0009506(PANTHER)|GO:0020037(InterPro)
Lac10g0621 347 Gene3D Peroxidase, domain 2 185 323 - -
Lac10g0621 347 ProSitePatterns Peroxidases proximal heme-ligand signature. 207 217 IPR019793 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac10g0621 Lac-Chr10:4761504 Lac9g2303 Lac-Chr9:42385509 1.00E-105 dispersed
Lac10g0621 Lac-Chr10:4761504 Lac1g2545 Lac-Chr1:46818589 1.50E-67 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac10g0621 K00430 - csv:101208042 597.43