Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac10g0638 ATGGCGTCAAGATACAAGCCTGGTGAGGATACTGATGATAAAGATAGTATCTGGGTTATAGATCAGCAGATTGACCAGCCAATGGAGGAGGAGTCTAAGCGGCTAAAAAATGCGTATCAGGAAAAGGATCACTCTTTTCTAAAAATTCTACAACTTGCATTCCAAAGCCTTGGAATAGTCTACGGAGATTTGGGTGCTTCCCCTTTATATGTCTTCTACAACACATTCCCCGATGGAGTTGAAAATACAGAGGACTTGATAGGAGCCCTGTCATTGATTATATACTCTCTGACTCTCATTCCTCTTATCAAGTACGTATTTATTGTCTGCAAGGCAAATGACGATGGTCAAGGTGGAACATTTGCTCTATATTCATTACTATGCCGTCATGCAAAAATATTAACTATCCCTAACCAGGACCACACTGATGAAAAGCTTACTACTTATAGTCGTTCTGAGTTCCGTGAACAATCATTTTCTGCAAAAACTAAGAAATGGCTGGAAGGGCATCATTATAAGAAACACGCAATTCTAGTTCTCGTTCTTGTTGGCTCTTGCATGGTGATTGGGGATGGGATTCTAACACCTGCTATTTCAGTTCTTTCTGCTGTTGGGGGGATCAACGTTGGTCGTACAAAAATAAGTAGTGATGTAGCTGTTATTGTTGCCATTGTCATACTTATTGTCTTGTTTAGCATGCAACGTTATGGCACAGATAAAGTTAGTTGGCTTTTCGCCCCAGTAGTTTTTCTATGGTTCATCTTAATTGGAGGCATTGGCATATTCAACATCTGGAAGCATGATAGCAGTGTCCTGAGAGCCTTTTCTCCTATATATATATATCGGTACTTCAAAAGGGGAGGGAAAGCTGGATGGACATCCCTTGGAGGGGTCATGCTTAGTATAACAGGAACTGAAGCACTTTTCGCAGACCTATCCCATTTTCCAGTTTCCTCCATACAAATTGCTTTTACAGTAGTTGTATTTCCTTGCCTTCTTTTAGCCTACTCTGGACAAGTTGCCTATCTCATGAAAAACCCAGAGTATGTTGCCGGTGCCTTCTATCATTCAATTCCAGACAGTATATATTGGCCAGTATTTTTTGTTGCAACTGCCGCCGCTGTTGTTGCAAGCCAAGCCACCATATCTGCAACCTTTTCATTAGTCAAGCAAGCCCTTGCACTTGGTTGTTTTCCAAGAGTTAAAGTTGTTCATACTTCTACGAAGTTCCGTAATCAGATTTATATTCCTGATATTAACTGGATCCTGATGGTCCTTTGCATTGCCGTGACTGCTGGATTCAAAAATCAAAGCCAGATTGGAAACGCTTCCGGGACAGCAGTGATTATAGTGATGTTGGTAACCACATTCCTCATGGCTTTAATAATGATATTAGTGTGGCACTCCCACTGGACTCTAGTCCTGCTCTTCACTTGCTTATCACTGATTGTGGAGGGTACCTACCTCTCGTCAGTTATCCAAAAGGTTTACCAAGGTGGGTGGGTTCCTTTGGTTATAGCGACAGCATTTTTCATCATAATGTACATTTGGCATTATGGTACAGCTAAACGTTATGAGATTGAGATGCACACTAAGGTTTCAATGGCATGGATTCTTAGCCTTGGCCCCAGTTTAGGACTTGTGAGGGTGCCTGGGATAGGACTTGTGTACACAGAACTTACAAGTGGAGTCCCCCACATCTTTTCACACTTCATCACAAATTTACCTGCCATTCATTCGGTTGTGGTTTTTGTCTGTTTGAAGTGTCTGCCTGTCCGCACTGTCCCGGAAGAAGAGAGATTTCTGGTAAAACGGATTGGACCTAAGAATTTCCGCATGTTTCGCTGTGTAGCTAGATATGGTTACAAAGACCTCCACAAGGAAGATGATGATTTTGAGAAGAAACTCTTTGATAGCCTCTTCTTGTTTGTTCGACTCGAGTCCTTGATGGATGGTGGGTCTTCAGATTCGGATGTGTCTAGCATACTTGATCAGCAAAATGAAACTATTACAGAGATTCCATTGAGCAAACTTAATTCAACTTCCACATCTATGGAATCATTATGCCTGCCAACGGCAGACTCAATTGAGCTTGTCACTTCTCCATTGCATCAGAACCAAACCATCATAACACCCAATCAAGAAAACAGTCAGACTGAGACAGATGAATTAGAGTTCTTGGTTAGCAGTAAAAGTGTCGGAGTTGTACACATACTTGGAAATACAGTAATGAAAGCTAGGAGGGAATCCAGATTCTACAAAAAGTTTGCGATCGATTATATATATGCATTTCTTAAGAAGATCTGCAGGGAAAAGAGCGCAATGTACAATGTTCCCCATGAGAGTTTGCTTAACGTTGGGCAAACATTCTATGTATAA 2379 41.36 MASRYKPGEDTDDKDSIWVIDQQIDQPMEEESKRLKNAYQEKDHSFLKILQLAFQSLGIVYGDLGASPLYVFYNTFPDGVENTEDLIGALSLIIYSLTLIPLIKYVFIVCKANDDGQGGTFALYSLLCRHAKILTIPNQDHTDEKLTTYSRSEFREQSFSAKTKKWLEGHHYKKHAILVLVLVGSCMVIGDGILTPAISVLSAVGGINVGRTKISSDVAVIVAIVILIVLFSMQRYGTDKVSWLFAPVVFLWFILIGGIGIFNIWKHDSSVLRAFSPIYIYRYFKRGGKAGWTSLGGVMLSITGTEALFADLSHFPVSSIQIAFTVVVFPCLLLAYSGQVAYLMKNPEYVAGAFYHSIPDSIYWPVFFVATAAAVVASQATISATFSLVKQALALGCFPRVKVVHTSTKFRNQIYIPDINWILMVLCIAVTAGFKNQSQIGNASGTAVIIVMLVTTFLMALIMILVWHSHWTLVLLFTCLSLIVEGTYLSSVIQKVYQGGWVPLVIATAFFIIMYIWHYGTAKRYEIEMHTKVSMAWILSLGPSLGLVRVPGIGLVYTELTSGVPHIFSHFITNLPAIHSVVVFVCLKCLPVRTVPEEERFLVKRIGPKNFRMFRCVARYGYKDLHKEDDDFEKKLFDSLFLFVRLESLMDGGSSDSDVSSILDQQNETITEIPLSKLNSTSTSMESLCLPTADSIELVTSPLHQNQTIITPNQENSQTETDELEFLVSSKSVGVVHILGNTVMKARRESRFYKKFAIDYIYAFLKKICREKSAMYNVPHESLLNVGQTFYV 792
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 4911601 4916499 - Lag0024683.1 Lac10g0638 583169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac10g0638 792 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 39 791 IPR003855 GO:0006813(PANTHER)|GO:0015079(InterPro)|GO:0015079(PANTHER)|GO:0016020(PANTHER)|GO:0016020(InterPro)|GO:0071805(InterPro)
Lac10g0638 792 NCBIfam potassium uptake protein 52 791 IPR003855 GO:0015079(InterPro)|GO:0016020(InterPro)|GO:0071805(InterPro)
Lac10g0638 792 Pfam K+ potassium transporter integral membrane domain 52 539 IPR053951 -
Lac10g0638 792 Pfam K+ potassium transporter C-terminal domain 551 789 IPR053952 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac10g0638 Lac-Chr10:4911601 Lac8g0033 Lac-Chr8:587969 6.90E-206 dispersed
Lac10g0638 Lac-Chr10:4911601 Lac10g0639 Lac-Chr10:4918953 0.00E+00 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac10g0638 K03549 - csv:101217671 1306.2