Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac10g0687 ATGGGTTCCAGAACACTGTTTTTCTTCATCTTGCTTTCCTTTTTGGCTGCTGCTTCTTTCAGGTCTGCTTCTGCAGAGGATGAGGAAGACACTGGTCTTGTTATGAACTTTTACAAAGATACATGTCCCCAAGCTGAAGATATCATCAAAGAACAAGTCAGGCTTCTCTACAAGCGCCACAAGAACACTGCATTCTCTTGGCTCAGAAACATCTTCCATGACTGTGCTGTTCAATCCTGTGATGCATCTCTGCTTCTGGATTCGACAAGAAGGACCCTGTCCGAGAAAGAAACAGACAGGAGCTTTGGACTGAGGAACTTTAGGTATATTGAGACCATAAAAGAGGCAGTGGAGAGGGAGTGCCCTGGAGTTGTGTCCTGTGCGGACATCCTTGTTTTGTCTGCAAGAGATGGCATTGTTTCTCTTGGAGGGCCTTACATCCCACTTAAGACTGGCAGAAGAGATGGAAGGAGAAGCAGAGCTGAAGTGGTGGAAGAGTACCTTCCAGACCACAATGAAAGCATGTCTGTTGTTCTTGAAAGATTTGCATCCATGGGTATTGACACCCCTGGAGTTGTTGCTTTACTAGGAGCTCATAGTGTTGGTAGAACACACTGTGTGAAGTTGGTGCACCGGCTCTACCCAGAGGTAGACCCTGTGCTGAACCCTGGCCATGTAGAGCACATGCTGTACAAGTGTCCTGATGAGATCCCAGATCCCAAGGCTGTACAGTACGTGAGGAATGACCGTGGTACACCCATGATTCTGGACAACAACTACTACAGAAACATACTTGACAACAAGGGGTTGCTGATAGTGGACCATCAACTGGCCACAGACAAGAGAACAAAGCCATACGTGAAGAAAATGGCCAAAAAGCAAGACTATTTCTTCAAGGAATTCTCAAGAGCCATTACCATCCTTTCTGAGAACAATCCTCTCACTGGCACAAAGGGTGAGATCAGGAAGCAGTGCAATGTTGCCAACAAGCTGCACTGA 999 46.65 MGSRTLFFFILLSFLAAASFRSASAEDEEDTGLVMNFYKDTCPQAEDIIKEQVRLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRRTLSEKETDRSFGLRNFRYIETIKEAVERECPGVVSCADILVLSARDGIVSLGGPYIPLKTGRRDGRRSRAEVVEEYLPDHNESMSVVLERFASMGIDTPGVVALLGAHSVGRTHCVKLVHRLYPEVDPVLNPGHVEHMLYKCPDEIPDPKAVQYVRNDRGTPMILDNNYYRNILDNKGLLIVDHQLATDKRTKPYVKKMAKKQDYFFKEFSRAITILSENNPLTGTKGEIRKQCNVANKLH 332
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 5289913 5291488 + Lag0024732.1 Lac10g0687 583218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac10g0687 332 ProSiteProfiles Plant heme peroxidase family profile. 32 329 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac10g0687 332 FunFam Peroxidase 36 177 - -
Lac10g0687 332 FunFam Peroxidase 169 308 - -
Lac10g0687 332 PANTHER - 15 328 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac10g0687 332 Pfam Peroxidase 50 292 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac10g0687 332 Gene3D Peroxidase, domain 2 169 308 - -
Lac10g0687 332 PRINTS Plant peroxidase signature 190 202 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac10g0687 332 PRINTS Plant peroxidase signature 247 262 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac10g0687 332 PRINTS Plant peroxidase signature 303 316 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac10g0687 332 PRINTS Plant peroxidase signature 143 158 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac10g0687 332 PRINTS Plant peroxidase signature 42 61 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac10g0687 332 PRINTS Plant peroxidase signature 105 118 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac10g0687 332 PRINTS Plant peroxidase signature 263 280 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac10g0687 332 PRINTS Plant peroxidase signature 124 134 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac10g0687 332 PRINTS Plant peroxidase signature 66 86 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac10g0687 332 CDD secretory_peroxidase 32 327 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Lac10g0687 332 PRINTS Haem peroxidase superfamily signature 125 142 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac10g0687 332 PRINTS Haem peroxidase superfamily signature 143 155 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac10g0687 332 PRINTS Haem peroxidase superfamily signature 249 264 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac10g0687 332 PRINTS Haem peroxidase superfamily signature 191 206 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac10g0687 332 PRINTS Haem peroxidase superfamily signature 64 78 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac10g0687 332 Gene3D - 36 329 - -
Lac10g0687 332 SUPERFAMILY Heme-dependent peroxidases 33 329 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac10g0687 Lac-Chr10:5289913 Lac10g3028 Lac-Chr10:44846354 1.20E-103 dispersed
Lac10g0687 Lac-Chr10:5289913 Lac1g2113 Lac-Chr1:42602555 3.20E-104 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac10g0687 K00430 - csv:101214168 618.231