Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac10g0732 ATGCTCAATTTTGCGACTTTCCTCTTCCTTGTCAGTTTTGTTATCCATGGGCATGCTCAGTCTCTTTACCGGTGTGGACCCACCAATTTCACCTCCAATAGCAGCTATGAATCGAGCGTTAATCTTCTCCTTTCGAATCTCTCCACCAACGCCCCCGGAATTAATGGATTCTTCAATACCTCCGTCGGCCGTACACCAGAGGACACCGTTAACGGTCTCTTCCAGTGCCGTGGAGACGCCACCAACGGCTCCTGCCGAAATTGCTTAAAGGAAGCTACCACAAACGTAGCCCGTCAGTTCTGTCCGTTGAGCAAAGGCGCTGTGGTTTGGTATGACGACTGCTTGTTGCGTTATTCTGACCAAAACTTTTTTTCCATGGTGTCCACTGAGCCAAGTTTCAGCTTAGATAACGTCGATAGTATAGGCGTGGACACGCCTCGCTTCAACCAATTAGTGATGTCCACATTGACGGCCACGGCGGCTAACGCCTCTTTGGCGGTGGGGCAAATGTTTGCAACGGGAGAGGCAATTTTCACATCAAATACAACACTTTACGCATTAGTACAGTGCAGCGGCGATTTGTCAAATTCGAATTGCCAAGATTGCTTAGCACGAGCTATCAGGAGTATTCCGGGTTGCTGCAATAATAAAAAAGGTGGGAGAATTTTGTTTCCCAGCTGTTACGCTCGTTACGAACTTTACCCCTTTTACCAACTCACCAGGACCAATTCGGTAACGCCTCCTGCGCCAGCCACTCGCCCGCCCACTTCAGCAACTCCACCACCACCTCCTTCCTCAGGGGAAAACATATCCTCGGCGGTGATAATTGTAGCCATCGTGGTTCCAGTTACTGCCTCCATTCTGCTTTTGGTTCTGGGCTGGAGTTTCCTGCTCCGAAGAATAAAGAAGAAATACTCTGCTGTTAAGGAAGATAGTGTTATCAATGAAATCACCACTGTGGAATCTCTACAATTTGATTTCAATACAATTGAAGCTGCTACTAACAAATTCTCAGTGGAAAACAAGTTGGGTGAAGGTGGATTTGGTGCAGTCTACAAGGGTACACTTGATAATGGGCAAGAGATAGCAGTGAAAAGATTATCAACCAGATCTTTGCAAGGTTCTGAAGAGTTCAAAAATGAGGTTGTGTTGGTTGCTAAACTTCAACATAGAAATCTAGTAAGGCTATTGGGATTCTGCTTGGAGGGTGGAGAAAAGATACTTATCTATGAATACATTCCCAACAAAAGCCTTGACTATTTCCTATTTGATATCGAGGGACAGAAAGTGTTAGATTGGTTGAGTCGACATAAGATCATAAATGGGATTGCTCGGGGAATGTTATATTTACATGAAGATTCACGACTTCGAATTATTCATCGTGATCTTAAAGCAAGCAATGTCTTGTTAGATGAGAAAATGAATCCAAAGATTTCAGACTTTGGTATGGCAAGAATTATTCAAATGGATGAAACTCAAAGAAATACATGTCGAATTGTCGGTACCTATGGTTACATGGCTCCTGAATATGCAATGCACGGAAACTTCTCCATGAAATCTGACGTATATAGCTTTGGAGTTCTAGTATTGGAGATTATAAGTGGAAAGAAAAACAGTACCTTTTATATGTCAGGTCTTGCTGAGGACATCTTGACCTATGCTTGGAAATTATGGAAGGATGGAACACCATTAGAACTACTGGACTCAGGTTTGAGAGATAGTCACTCAAGAAATGAAGTGCTCAGATGCATCCATATTGCTTTACTTTGTGTTCAGGAGGATCCCAACTGTAGACCCTCCATGGCATCCGTTGTTCTTATGTTGAATAGTGATTCAGTTACTTTGCTTGAACCTAAAGAACCAACATTCTTCATGCGCAGTAGAGATAATGATACTGTAGTACATGGTGATCCATCTTCGAATAGATCTCAATACTCTGCCAATAAAGTATCTATAACTGAATTGTATCCACGATGA 1977 43.05 MLNFATFLFLVSFVIHGHAQSLYRCGPTNFTSNSSYESSVNLLLSNLSTNAPGINGFFNTSVGRTPEDTVNGLFQCRGDATNGSCRNCLKEATTNVARQFCPLSKGAVVWYDDCLLRYSDQNFFSMVSTEPSFSLDNVDSIGVDTPRFNQLVMSTLTATAANASLAVGQMFATGEAIFTSNTTLYALVQCSGDLSNSNCQDCLARAIRSIPGCCNNKKGGRILFPSCYARYELYPFYQLTRTNSVTPPAPATRPPTSATPPPPPSSGENISSAVIIVAIVVPVTASILLLVLGWSFLLRRIKKKYSAVKEDSVINEITTVESLQFDFNTIEAATNKFSVENKLGEGGFGAVYKGTLDNGQEIAVKRLSTRSLQGSEEFKNEVVLVAKLQHRNLVRLLGFCLEGGEKILIYEYIPNKSLDYFLFDIEGQKVLDWLSRHKIINGIARGMLYLHEDSRLRIIHRDLKASNVLLDEKMNPKISDFGMARIIQMDETQRNTCRIVGTYGYMAPEYAMHGNFSMKSDVYSFGVLVLEIISGKKNSTFYMSGLAEDILTYAWKLWKDGTPLELLDSGLRDSHSRNEVLRCIHIALLCVQEDPNCRPSMASVVLMLNSDSVTLLEPKEPTFFMRSRDNDTVVHGDPSSNRSQYSANKVSITELYPR 658
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 5685983 5690050 + Lag0024777.1 Lac10g0732 583263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac10g0732 658 MobiDBLite consensus disorder prediction 248 266 - -
Lac10g0732 658 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 86 624 - GO:0004674(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)|GO:0042742(PANTHER)
Lac10g0732 658 ProSiteProfiles Gnk2-homologous domain profile. 18 123 IPR002902 -
Lac10g0732 658 Gene3D Phosphorylase Kinase; domain 1 299 412 - -
Lac10g0732 658 ProSiteProfiles Gnk2-homologous domain profile. 129 236 IPR002902 -
Lac10g0732 658 MobiDBLite consensus disorder prediction 245 266 - -
Lac10g0732 658 FunFam Cysteine-rich receptor-like protein kinase 10 299 412 - -
Lac10g0732 658 Pfam Protein tyrosine and serine/threonine kinase 339 606 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Lac10g0732 658 CDD STKc_IRAK 343 609 - -
Lac10g0732 658 Gene3D - 137 236 IPR038408 -
Lac10g0732 658 Gene3D - 19 123 IPR038408 -
Lac10g0732 658 MobiDBLite consensus disorder prediction 627 647 - -
Lac10g0732 658 SMART serkin_6 337 613 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac10g0732 658 FunFam Cysteine-rich receptor-like protein kinase 10 133 236 - -
Lac10g0732 658 ProSitePatterns Serine/Threonine protein kinases active-site signature. 458 470 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Lac10g0732 658 ProSiteProfiles Protein kinase domain profile. 337 623 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac10g0732 658 FunFam Cysteine-rich receptor-like protein kinase 28 21 122 - -
Lac10g0732 658 ProSitePatterns Protein kinases ATP-binding region signature. 343 365 IPR017441 GO:0005524(InterPro)
Lac10g0732 658 FunFam cysteine-rich receptor-like protein kinase 10 413 615 - -
Lac10g0732 658 SUPERFAMILY Protein kinase-like (PK-like) 322 642 IPR011009 -
Lac10g0732 658 Pfam Salt stress response/antifungal 25 121 IPR002902 -
Lac10g0732 658 Pfam Salt stress response/antifungal 148 233 IPR002902 -
Lac10g0732 658 Gene3D Transferase(Phosphotransferase) domain 1 413 619 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac10g0732 Lac-Chr10:5685983 Lac10g0743 Lac-Chr10:5758141 4.30E-254 dispersed
Lac12g0634 Lac-Chr12:6696677 Lac10g0732 Lac-Chr10:5685983 1.60E-34 dispersed
Lac10g0730 Lac-Chr10:5677985 Lac10g0732 Lac-Chr10:5685983 3.50E-31 proximal
Lac10g0731 Lac-Chr10:5680441 Lac10g0732 Lac-Chr10:5685983 1.40E-149 tandem
Lac2g1815 Lac-Chr2:17824101 Lac10g0732 Lac-Chr10:5685983 3.30E-47 transposed
Lac10g0732 Lac-Chr10:5685983 Lac12g0631 Lac-Chr12:6673623 2.10E-36 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85639 PF07714 PK_Tyr_Ser-Thr 4.20E-51 CL0016 Lac PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac10g0732 - - - 0.0