Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lac10g0739 | ATGGCATGTGAAGCTGCGGATGAGATGACCAATGTGGAATCTCTGCAATTTGATTTCGATACAATTGATGCTGCTACTAACAATTTCTCAACGGAAAACAAGTTGGGTGAAGGTGGATTTGGTGCAGTCTACAAGGGTAGGCTGGATAATGGACAAGAGATAGCAGTGAAGAGATTATCAAGAAGATCTTCGCAAGGTGCTGAAGAGTTCAAGAATGAGGTGATGTTGGTTGCTAAGCTTCAACATAGAAATCTTGTAAGGCTATTGGGATTTTGTTTGGAGGGCGAAGAAAAGCTACTCGTCTATGAATATATTCCCAACAAAAGCCTCGACTATTTCCTATTTGATCCTCAGGGAGGAAAAGAGTTGGATTGGTTTAAACGTTATAAGATCATTAATGGAATTGCTCGTGGAGTTTTATATCTACATGAAGATTCCCGACTTCGAATTATTCATCGTGATCTTAAAGCTAGCAATGTCTTATTAGATGGGAATTTGGATCCAAAAATTTCAGACTTTGGTATGGCAAGGATCATCCAAGTAGATCAAACTCAAGGAAATACTAATCGAATTGTCGGTACCTACGGTTACATGGCTCCTGAATATGCAATGCATGGAAACTTCTCAACAAAATCTGACGTGTATAGCTATGGAGTCTTAGTCTTGGAGATTATTAGTGGCAAGAAAAATAACACATTTTATCTATCAAATCTTGCCGAAGACATCTTAAACTACACTTGGAATCTATGGGAAAATGGAACAGCAATGGAATTGTTGGATTCAAGTATGAGAGACAGTTACTCTAAAAATGAGGTGCTTAGATGTATTCATATTGCTTTACTATGCGTTCAAGAGGATCATGTTCGTAGACCCTCCATGGCGTCCATCGTTCTTATGCTAAATAGTTATTCTATTCCTTTGCCTTCACCGAAAAAGCCAGGATTCTTACTTCGTAGTGCGAACAATAGCATTATAACAAACCAAGACCAGTCAGCAAGAAGGTGCTTAGTTTGGTCCAACAATGAAATATCTATTTCTGAATTGCACCCACGATGA | 1056 | 38.64 | MACEAADEMTNVESLQFDFDTIDAATNNFSTENKLGEGGFGAVYKGRLDNGQEIAVKRLSRRSSQGAEEFKNEVMLVAKLQHRNLVRLLGFCLEGEEKLLVYEYIPNKSLDYFLFDPQGGKELDWFKRYKIINGIARGVLYLHEDSRLRIIHRDLKASNVLLDGNLDPKISDFGMARIIQVDQTQGNTNRIVGTYGYMAPEYAMHGNFSTKSDVYSYGVLVLEIISGKKNNTFYLSNLAEDILNYTWNLWENGTAMELLDSSMRDSYSKNEVLRCIHIALLCVQEDHVRRPSMASIVLMLNSYSIPLPSPKKPGFLLRSANNSIITNQDQSARRCLVWSNNEISISELHPR | 351 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 5729761 | 5731386 | + | Lag0024784.1 | Lac10g0739 | 583270 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lac10g0739 | 351 | FunFam | cysteine-rich receptor-like protein kinase 10 | 105 | 307 | - | - | |
Lac10g0739 | 351 | ProSitePatterns | Protein kinases ATP-binding region signature. | 35 | 57 | IPR017441 | GO:0005524(InterPro) | |
Lac10g0739 | 351 | SUPERFAMILY | Protein kinase-like (PK-like) | 14 | 331 | IPR011009 | - | |
Lac10g0739 | 351 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 150 | 162 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Lac10g0739 | 351 | PANTHER | RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 | 14 | 315 | - | GO:0004674(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)|GO:0042742(PANTHER) | |
Lac10g0739 | 351 | SMART | serkin_6 | 29 | 304 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Lac10g0739 | 351 | FunFam | Cysteine-rich receptor-like protein kinase 10 | 1 | 104 | - | - | |
Lac10g0739 | 351 | Gene3D | Phosphorylase Kinase; domain 1 | 2 | 104 | - | - | |
Lac10g0739 | 351 | Pfam | Protein tyrosine and serine/threonine kinase | 31 | 298 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Lac10g0739 | 351 | ProSiteProfiles | Protein kinase domain profile. | 29 | 304 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Lac10g0739 | 351 | CDD | STKc_IRAK | 35 | 301 | - | - | |
Lac10g0739 | 351 | Gene3D | Transferase(Phosphotransferase) domain 1 | 105 | 306 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lac10g0739 | Lac-Chr10:5729761 | Lac10g0746 | Lac-Chr10:5781596 | 4.20E-163 | dispersed | |
Lac10g0737 | Lac-Chr10:5722742 | Lac10g0739 | Lac-Chr10:5729761 | 1.60E-183 | proximal | |
Lac10g0739 | Lac-Chr10:5729761 | Lac10g0740 | Lac-Chr10:5732863 | 1.10E-142 | tandem |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
85642 | PF07714 | PK_Tyr_Ser-Thr | 9.50E-51 | CL0016 | Lac | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lac10g0739 | - | - | - | 0.0 |