Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lac10g0739 ATGGCATGTGAAGCTGCGGATGAGATGACCAATGTGGAATCTCTGCAATTTGATTTCGATACAATTGATGCTGCTACTAACAATTTCTCAACGGAAAACAAGTTGGGTGAAGGTGGATTTGGTGCAGTCTACAAGGGTAGGCTGGATAATGGACAAGAGATAGCAGTGAAGAGATTATCAAGAAGATCTTCGCAAGGTGCTGAAGAGTTCAAGAATGAGGTGATGTTGGTTGCTAAGCTTCAACATAGAAATCTTGTAAGGCTATTGGGATTTTGTTTGGAGGGCGAAGAAAAGCTACTCGTCTATGAATATATTCCCAACAAAAGCCTCGACTATTTCCTATTTGATCCTCAGGGAGGAAAAGAGTTGGATTGGTTTAAACGTTATAAGATCATTAATGGAATTGCTCGTGGAGTTTTATATCTACATGAAGATTCCCGACTTCGAATTATTCATCGTGATCTTAAAGCTAGCAATGTCTTATTAGATGGGAATTTGGATCCAAAAATTTCAGACTTTGGTATGGCAAGGATCATCCAAGTAGATCAAACTCAAGGAAATACTAATCGAATTGTCGGTACCTACGGTTACATGGCTCCTGAATATGCAATGCATGGAAACTTCTCAACAAAATCTGACGTGTATAGCTATGGAGTCTTAGTCTTGGAGATTATTAGTGGCAAGAAAAATAACACATTTTATCTATCAAATCTTGCCGAAGACATCTTAAACTACACTTGGAATCTATGGGAAAATGGAACAGCAATGGAATTGTTGGATTCAAGTATGAGAGACAGTTACTCTAAAAATGAGGTGCTTAGATGTATTCATATTGCTTTACTATGCGTTCAAGAGGATCATGTTCGTAGACCCTCCATGGCGTCCATCGTTCTTATGCTAAATAGTTATTCTATTCCTTTGCCTTCACCGAAAAAGCCAGGATTCTTACTTCGTAGTGCGAACAATAGCATTATAACAAACCAAGACCAGTCAGCAAGAAGGTGCTTAGTTTGGTCCAACAATGAAATATCTATTTCTGAATTGCACCCACGATGA 1056 38.64 MACEAADEMTNVESLQFDFDTIDAATNNFSTENKLGEGGFGAVYKGRLDNGQEIAVKRLSRRSSQGAEEFKNEVMLVAKLQHRNLVRLLGFCLEGEEKLLVYEYIPNKSLDYFLFDPQGGKELDWFKRYKIINGIARGVLYLHEDSRLRIIHRDLKASNVLLDGNLDPKISDFGMARIIQVDQTQGNTNRIVGTYGYMAPEYAMHGNFSTKSDVYSYGVLVLEIISGKKNNTFYLSNLAEDILNYTWNLWENGTAMELLDSSMRDSYSKNEVLRCIHIALLCVQEDHVRRPSMASIVLMLNSYSIPLPSPKKPGFLLRSANNSIITNQDQSARRCLVWSNNEISISELHPR 351
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
10 5729761 5731386 + Lag0024784.1 Lac10g0739 583270
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lac10g0739 351 FunFam cysteine-rich receptor-like protein kinase 10 105 307 - -
Lac10g0739 351 ProSitePatterns Protein kinases ATP-binding region signature. 35 57 IPR017441 GO:0005524(InterPro)
Lac10g0739 351 SUPERFAMILY Protein kinase-like (PK-like) 14 331 IPR011009 -
Lac10g0739 351 ProSitePatterns Serine/Threonine protein kinases active-site signature. 150 162 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Lac10g0739 351 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 14 315 - GO:0004674(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)|GO:0042742(PANTHER)
Lac10g0739 351 SMART serkin_6 29 304 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac10g0739 351 FunFam Cysteine-rich receptor-like protein kinase 10 1 104 - -
Lac10g0739 351 Gene3D Phosphorylase Kinase; domain 1 2 104 - -
Lac10g0739 351 Pfam Protein tyrosine and serine/threonine kinase 31 298 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Lac10g0739 351 ProSiteProfiles Protein kinase domain profile. 29 304 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac10g0739 351 CDD STKc_IRAK 35 301 - -
Lac10g0739 351 Gene3D Transferase(Phosphotransferase) domain 1 105 306 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac10g0739 Lac-Chr10:5729761 Lac10g0746 Lac-Chr10:5781596 4.20E-163 dispersed
Lac10g0737 Lac-Chr10:5722742 Lac10g0739 Lac-Chr10:5729761 1.60E-183 proximal
Lac10g0739 Lac-Chr10:5729761 Lac10g0740 Lac-Chr10:5732863 1.10E-142 tandem
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85642 PF07714 PK_Tyr_Ser-Thr 9.50E-51 CL0016 Lac PK
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac10g0739 - - - 0.0