Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac10g0741 ATGGCTGCAAGGAGTGCCATCCTCCACATGCTCAATTCTCTTACTTTCCTCTTCCTCCTCTGTTTCCTTATCCATGGAAACGCACAGGTCCCAGTTGAATACCCACATCGCATGTGCTTTTCCGGCAATTTCACCCAGAACAGCACCTACCATTCCAACCTCAATCTTCTCTTTTCAATTCTCACCGCCAACGGCCCCCAAACAAATCGATTCCTCAACACTTCCGTCGGCCGCACACCAGACGACACCGTTTACGGTCTCTTCCAGTGCCGTGGAGACGTCACCAACGCCGTCTGCCGAACTTGCTTGGCCGCCGCTACCAGAGACACAGCTCGGCTGTACTGTCCCCTGAGTAAAGGCGCTGTGGTTTGGTACGACGAATGCATATTTCGCTATTCCGACCAACCTTTCTTTTCCCTGCAATCCATAAGTCTGGTGAATATGGTATCAGGGAATACGTGCGATAATATAGACGTCGAAAAGGCTCGATTCAACAAACTAGTGATGTCCACATTGATGGACACCGCGGCCAACGCGTCTTCCGTGGGCGAATTGTTTGCAACCCACAAGGCTAATTTTACATCAGATATCATGCTTTACACATTAGCACAGTGTACCGGAGATTTGTCCAATTCGGAATGCGAAATATTTTTACGACTGGCTATCAATGATATTCCGAATTGTTGCACTGATAAACGAGGTGGGAGGGTATTGTCACCCATCTGTTTCGTTCGTTACGAAGTTTACAAGTTTTACGAACCCACGCCTGCGAATCCGGGTAATCATCGTCCGCCCAATTCTTCAACAACTCTTCCTCCACCATCACCACCTCCTCCTGCAGGGGAAAGCAGATCCTCAACATCAACAACGGTGACAATTGCCGCCATTGTGGCTCCAATAACTCTCTCCGTGCTGCTTTTCGTGGGATGCTGTCTTCTGCGCCGAAGACTAAAGACGATGAAATACATTGCTGCAAAGCAAGATATTGTTATTGATGAGATGCCCACTGTGGAATCTCTGCAATTTGATTTCAATACAATTGAAGCTGCTACTAACAAATTCTCAGTGGAAAACAGGTTAGGTGAAGGTGGATTTGGTGCAGTCTACAAGGGTAGGCTTGATAATGGACAAGAGATAGCTGTGAAAAGATTGTCAAGAAGATCTCTGCAAGGTTCTGAAGAGTTCAAGAATGAGGTGATGTTGGTTGCTAAGCTTCAACATAGAAATCTTGTAAGGCTATTGGGATTCTGCTTGGAGGGTCAAGAAAAGCTACTCGTTTATGAATACATTCCCAACAAAAGTCTTGATTATTTCCTATTTGATTCTAAGAAACAAAGAGAATTGGATTGGTTGAGTCGATATAAGATCGTTAACGGCATTGCTCGTGGAATTTTATATCTACATGAAGATTCCCGACTTAGAATTATTCATCGTGACCTTAAACCTAGTAATGTCTTGTTAGATGAGGATATGAATCCGAAAATTTCAGACTTTGGTATGGCAAGAATTGTCCAAGTGAATCAAAATCAAGCAACTACAAACCGAATTGTTGGTACCTATGGTTACATGTCTCCTGAATATGCTATGCATGGAAATTTCTCCACGAAATCTGATGTGTATAGCTTCGGAGTCTTAGCCTTGGAGATTATAAGTGGCAAGAAAAATAGCACATTTTATTCCGAACTTGCTGAAGACATCTTAACCTATGCTTGGAAACTATGGAAGGACGAGATGTCATTAGAACTATTGGATCCGAGTCTGCAAAATAACTACTCAAGAAATGAGGTGTTCAGATGCATCCATATTGCTTTACTATGTATTCAAGATGATCCTAGTCGTAGACCCTCCATGGCATCTATTGTTCTTATGCTCAGCAGTTACTCGTTTCCTTTGCCTTTGCCAGAAGAGCCAACAATCTTCATGCACAATACAGACACTAATACCATTGTAATAAATAGTGATCAATTTGCAAAACGACATCAAAGGTACTCTCGAGTAAATTATCTGAGCCATAAGAGCACTGGTTCGGAAGAGGTTGTGTTGGCTGTTGATGCGGATAAGAATCAGTGGTGCATGAAGGTTGATTTGAGGGTCAGCTATAAGACCAAGACTTCGCCGGAGTCGCCCCCGCCTCGTCGGAAACGCCACTGCCCTCCAGTGGGGTTCATTCTTCTTCCTCCTTCGTTCAACGTCCAATCGCAGATCTCTCCGTCTCCGTTTAGCATCTCCGACGACGTTCGCGTTCTTCTTCCTCCTTCGTTCAACGTCCCATCGCAGATCTCTCCGTCTCCGTTCAGCATCTCCGACGGCGTTCGCGATCGTTTGAATCTTGAAGAAATGGGTTTTTGTGATGGTGCTTTGGCGAGAAGGGCTTCACGAACACGTTTTCGCCGATGGAGAGTGCGAAGAAATCCGAACAGCAGCAACTACGGCGAGCGTTCGGCGTGGCTGTGGGTTTTCGAGCTTCAGCGGGTGATCGAGTTTTCGCAACGGCGTGGGTCTCGGCTCAACAGAAGTCCAGATCGAAGAGAGAAAAAAAAAAGAGAATAA 2550 45.25 MAARSAILHMLNSLTFLFLLCFLIHGNAQVPVEYPHRMCFSGNFTQNSTYHSNLNLLFSILTANGPQTNRFLNTSVGRTPDDTVYGLFQCRGDVTNAVCRTCLAAATRDTARLYCPLSKGAVVWYDECIFRYSDQPFFSLQSISLVNMVSGNTCDNIDVEKARFNKLVMSTLMDTAANASSVGELFATHKANFTSDIMLYTLAQCTGDLSNSECEIFLRLAINDIPNCCTDKRGGRVLSPICFVRYEVYKFYEPTPANPGNHRPPNSSTTLPPPSPPPPAGESRSSTSTTVTIAAIVAPITLSVLLFVGCCLLRRRLKTMKYIAAKQDIVIDEMPTVESLQFDFNTIEAATNKFSVENRLGEGGFGAVYKGRLDNGQEIAVKRLSRRSLQGSEEFKNEVMLVAKLQHRNLVRLLGFCLEGQEKLLVYEYIPNKSLDYFLFDSKKQRELDWLSRYKIVNGIARGILYLHEDSRLRIIHRDLKPSNVLLDEDMNPKISDFGMARIVQVNQNQATTNRIVGTYGYMSPEYAMHGNFSTKSDVYSFGVLALEIISGKKNSTFYSELAEDILTYAWKLWKDEMSLELLDPSLQNNYSRNEVFRCIHIALLCIQDDPSRRPSMASIVLMLSSYSFPLPLPEEPTIFMHNTDTNTIVINSDQFAKRHQRYSRVNYLSHKSTGSEEVVLAVDADKNQWCMKVDLRVSYKTKTSPESPPPRRKRHCPPVGFILLPPSFNVQSQISPSPFSISDDVRVLLPPSFNVPSQISPSPFSISDGVRDRLNLEEMGFCDGALARRASRTRFRRWRVRRNPNSSNYGERSAWLWVFELQRVIEFSQRRGSRLNRSPDRREKKKRE 849
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 5745812 5750312 + Lag0024786.1 Lac10g0741 583272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac10g0741 849 Gene3D Phosphorylase Kinase; domain 1 331 429 - -
Lac10g0741 849 Gene3D Transferase(Phosphotransferase) domain 1 430 629 - -
Lac10g0741 849 FunFam Cysteine-rich receptor-like protein kinase 10 315 429 - -
Lac10g0741 849 MobiDBLite consensus disorder prediction 258 281 - -
Lac10g0741 849 Gene3D - 146 251 IPR038408 -
Lac10g0741 849 Gene3D - 32 137 IPR038408 -
Lac10g0741 849 ProSiteProfiles Protein kinase domain profile. 354 630 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac10g0741 849 MobiDBLite consensus disorder prediction 256 286 - -
Lac10g0741 849 SUPERFAMILY Protein kinase-like (PK-like) 339 650 IPR011009 -
Lac10g0741 849 ProSiteProfiles Gnk2-homologous domain profile. 32 137 IPR002902 -
Lac10g0741 849 ProSiteProfiles Gnk2-homologous domain profile. 145 251 IPR002902 -
Lac10g0741 849 Pfam Salt stress response/antifungal 160 248 IPR002902 -
Lac10g0741 849 Pfam Salt stress response/antifungal 39 135 IPR002902 -
Lac10g0741 849 SMART serkin_6 354 628 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac10g0741 849 FunFam Cysteine-rich receptor-like protein kinase 28 35 136 - -
Lac10g0741 849 FunFam cysteine-rich receptor-like protein kinase 10 430 631 - -
Lac10g0741 849 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 150 640 - GO:0004674(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)|GO:0042742(PANTHER)
Lac10g0741 849 ProSitePatterns Protein kinases ATP-binding region signature. 360 382 IPR017441 GO:0005524(InterPro)
Lac10g0741 849 ProSitePatterns Serine/Threonine protein kinases active-site signature. 475 487 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Lac10g0741 849 Pfam Protein tyrosine and serine/threonine kinase 356 622 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Lac10g0741 849 CDD STKc_IRAK 360 624 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac10g0741 Lac-Chr10:5745812 Lac10g0745 Lac-Chr10:5774095 1.80E-268 dispersed
Lac10g0740 Lac-Chr10:5732863 Lac10g0741 Lac-Chr10:5745812 1.40E-260 tandem
Lac10g0252 Lac-Chr10:1952595 Lac10g0741 Lac-Chr10:5745812 1.40E-49 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85644 PF07714 PK_Tyr_Ser-Thr 3.10E-49 CL0016 Lac PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac10g0741 - - - 0.0