Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac10g0743 ATGCCTGCAACGAGTGCGAAACTCAATTACTTGTTCGAAATGGTGAATTTTTTAACTTTCCTCTTCCTCCTCTGTTTCCTTATCCATGGAAACGCACAGGTCCCAGTTGATTACCCATATCGCATGTGCTATTCCGGCAATTTCACACAGAACAGCACCTACCAATCCAACCTCAATCTTCTCTTTTCAAATCTCACCGCCAACGGCCCCCAAACAAATCGATTCTTCAACACTTCCGTCGGCCGCACACCAAACGATACCGTTTACGGTCTCTTCCAGTGCCGTGGAGACGTCACCAACGCCGTCTGCCGAACTTGCTTGGCCACCGTTACCAGAGACACAGCTCGGCTGTACTGTCCCCAGAGTAAAGGCGCTGTGGTTTGGCACGACGACTGCATTCTCCACTATTCCGACCAATCTTTCTTTTCCACCGTCTCCACAGAGCCAAGTTTGCAGTTACTGAATACGGGCGATATAGACGTCGACAAGGCTCGATTCAACCAACTAGTCATGTCCACGTTGAGGACCACCGCGACTCGGGCGGCCAACGCCTCTCCGGTGGGCGGATTGTTTGCAACCCAGCAGGCTAATTTCACATCAGATCTCACGCTTTACACATTAGCACAGTGTACCGGCGATTTGTCCAGTACGGATTGCGAAGAATGCTTACGACAAGTTACCAATGATATTCCAAGTTGTTGCACTGATAAACGAGGTGGGAGAGCTCTGTTTCCCAGCTGTTACGTTCGTTACGAAGTTTACAATTTTTACGAACTCACGCCAACGAATTCGGCGCCGCCTCCGTCAGCTCCCTCTCCCAATTCGACAACTCCAACACCACCTCGTCTTCCTTCTTCTCCTCCGCCAGGGGAAAGCAAATCATTAACTGTGTTAATTGTGGCCATTGTGGTTCCAATTGCTGTGTCCATACTGCTCTTTGTTCTGGGATTTTGTTTCCTGCGACGAAGAGCGAAGAAGAGACACTCTGCTGTAAAGGAAGATAGTGTTGTTAACGAGATGACCACTGTGGAATCGCTGCAATTTGATTTCAAAACAATCGAGGCTGCTACTAACAAATTCTCTGAGGAAAACAGGCTGGGAGAAGGCGGATTTGGTGTAGTCTTCAAAGGTGTCCTTGATGATGGACAAGAGATAGCAGTAAAAAGACTATCGAGAGGATCTCTGCAAGGTTCTGAAGAGTTCAAGAATGAGGTTTTATTGGTTGCTAAGCTTCAACACAGAAATCTAGTGAGGCTATTGGGATTCTGCTTGGAGGGTGAAGAGAAGATTCTCGTCTATGAGTACATTCCCAACAAAAGCCTGGACTTTTTCTTATTTGATCCAGAGAGACAAAGATGGTTGGATTGGCTGAAACGATATAAGATCATCAATGGAATTGCTCGAGGAATACTATATTTGCATCAAGATGCTCGTCTTCGAATTATTCATCGTGATCTTAAAGCGAGTAACATCTTGTTAGATGGAGATATGAATGCAAAAATTTCAGATTTTGGCATGGCAAGAATTATTCAAGTGGATCAAACTCAAGGAAATACAAGTAGGATTGTTGGTACCTACGGTTACATGTCTCCTGAATATGCAATGCACGGAAACTTCTCTATGAAGTCTGATGTTTATAGCTTTGGAGTTTTAGTCTTGGAGATTTTAAGTGGCAAGAAAAATAACAGCTTTTACTTGGCAAATCTTGCCCAAGACATTTTGATCTATGCTTGGAAATTGTGGAAGGATGGAATACCATTAGAATTGTTGGACCCGAGTCTGAGGGACAATTACTCAAGAAATGAGGTGCTTAGATGCATTCATATTGCTTTATTATGTGTTCAAGAGGATCCTAGTAGTAGACCTTCCATGGCTTCCATTGTTCTTATGCTTAATAGTTATTCAGTTACTTTGCCATTGCCCAAAGAGCCAACATTCTTCATGCGCAATGAAGACAATGACGTTATAATAGACAATGATCGATCGACAAATAAGTCTCTTCAGTTGTCTGTCAATGAAACATCTATATCTGAGTTGCATCCTCGTTAA 2049 44.02 MPATSAKLNYLFEMVNFLTFLFLLCFLIHGNAQVPVDYPYRMCYSGNFTQNSTYQSNLNLLFSNLTANGPQTNRFFNTSVGRTPNDTVYGLFQCRGDVTNAVCRTCLATVTRDTARLYCPQSKGAVVWHDDCILHYSDQSFFSTVSTEPSLQLLNTGDIDVDKARFNQLVMSTLRTTATRAANASPVGGLFATQQANFTSDLTLYTLAQCTGDLSSTDCEECLRQVTNDIPSCCTDKRGGRALFPSCYVRYEVYNFYELTPTNSAPPPSAPSPNSTTPTPPRLPSSPPPGESKSLTVLIVAIVVPIAVSILLFVLGFCFLRRRAKKRHSAVKEDSVVNEMTTVESLQFDFKTIEAATNKFSEENRLGEGGFGVVFKGVLDDGQEIAVKRLSRGSLQGSEEFKNEVLLVAKLQHRNLVRLLGFCLEGEEKILVYEYIPNKSLDFFLFDPERQRWLDWLKRYKIINGIARGILYLHQDARLRIIHRDLKASNILLDGDMNAKISDFGMARIIQVDQTQGNTSRIVGTYGYMSPEYAMHGNFSMKSDVYSFGVLVLEILSGKKNNSFYLANLAQDILIYAWKLWKDGIPLELLDPSLRDNYSRNEVLRCIHIALLCVQEDPSSRPSMASIVLMLNSYSVTLPLPKEPTFFMRNEDNDVIIDNDRSTNKSLQLSVNETSISELHPR 682
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 5758141 5760825 + Lag0024788.1 Lac10g0743 583274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac10g0743 682 ProSiteProfiles Gnk2-homologous domain profile. 36 141 IPR002902 -
Lac10g0743 682 FunFam Cysteine-rich receptor-like protein kinase 25 149 256 - -
Lac10g0743 682 SUPERFAMILY Protein kinase-like (PK-like) 345 657 IPR011009 -
Lac10g0743 682 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 320 435 - -
Lac10g0743 682 ProSiteProfiles Gnk2-homologous domain profile. 147 256 IPR002902 -
Lac10g0743 682 Gene3D Transferase(Phosphotransferase) domain 1 436 639 - -
Lac10g0743 682 FunFam Cysteine-rich receptor-like protein kinase 28 39 140 - -
Lac10g0743 682 ProSitePatterns Protein kinases ATP-binding region signature. 366 388 IPR017441 GO:0005524(InterPro)
Lac10g0743 682 Pfam Protein tyrosine and serine/threonine kinase 363 629 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Lac10g0743 682 MobiDBLite consensus disorder prediction 264 288 - -
Lac10g0743 682 ProSiteProfiles Protein kinase domain profile. 360 646 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac10g0743 682 MobiDBLite consensus disorder prediction 262 290 - -
Lac10g0743 682 Pfam Salt stress response/antifungal 43 139 IPR002902 -
Lac10g0743 682 Pfam Salt stress response/antifungal 164 253 IPR002902 -
Lac10g0743 682 ProSitePatterns Serine/Threonine protein kinases active-site signature. 481 493 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Lac10g0743 682 CDD STKc_IRAK 366 632 - -
Lac10g0743 682 FunFam cysteine-rich receptor-like protein kinase 10 436 638 - -
Lac10g0743 682 SMART serkin_6 360 635 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac10g0743 682 Gene3D - 36 141 IPR038408 -
Lac10g0743 682 Gene3D - 149 256 IPR038408 -
Lac10g0743 682 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 67 647 - GO:0004674(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)|GO:0042742(PANTHER)
Lac10g0743 682 Gene3D Phosphorylase Kinase; domain 1 321 435 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac10g0732 Lac-Chr10:5685983 Lac10g0743 Lac-Chr10:5758141 4.30E-254 dispersed
Lac10g0740 Lac-Chr10:5732863 Lac10g0743 Lac-Chr10:5758141 5.40E-289 dispersed
Lac10g0743 Lac-Chr10:5758141 Lac10g0746 Lac-Chr10:5781596 0.00E+00 dispersed
Lac10g0743 Lac-Chr10:5758141 Lac10g0744 Lac-Chr10:5765074 1.20E-278 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85645 PF07714 PK_Tyr_Ser-Thr 3.00E-47 CL0016 Lac PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac10g0743 - - - 0.0