Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac10g0745 ATGGCTGGAAGAAGGAGTGCGAACTTGGACATGCTTAAATTTCCTATTTTTCTCTTCCTCCTGAGTTGCGTTATCCCAGGAAACGCCCAGATTTCTGTACCTTCTTTGCCATATCGCGGTTGCTTGGACGCCAATTTCACCCCGATGAGCACCTATCAGTCCAACCTTAATCTCCTCTTCTCAGATCTCTCCACCGTCGCCCCCGTGAGTAGATTCTATAATACTTCCATCGGCCAAACGCCAAACGACACCGTTTACGGTCTCTTCCAGTGCCAAGGATACGTCAGCAACCAAAACTGTCGAGGTTGCGTGGCTGAAGCTACCAGAGACATAGCCCAACGGTACTGTCCCCTGAGGAAAGGAGCTGTGGCTTGGTTCGACGAGTGTATACTCCGTTATTCTGACCAATCCTTCTTTTCCACCGTCTCCACAGAGCCAAGTTTGCTATTACTGAATACGGGCGATATAGACGTCGACAAGTCTCGATTCAACCAACTAGTCATGTCCACATTGAGGGCCACTGCGTCTCTGGCGGCCAACGCCTCTTCGGTGGGTGAATTGTTTGCAACCCAGGAGGCTAATTTCACATCAGATCTAACGCTTTACACATTAGCACAGTGTACCGGCGATTTGTCCAATTCGGATTGCGAAGAATGTTTAAGACAAGCTACCAATTATATTCCCAGTTGCTGCACTAATAAACGAGGTGGGAGAGTTTTGTTTCCCAGCTGTTACGTTCGTTACGAAGTTTATTCATTTTATGAACTCACGCCAAAGGATCCAGTACCGCCTCCGGAACCTTCCACGCCCAATTCGACAACTCCAACACCACCTCTTCCTCCTCCTCCTCCGCCGGGGGAAAGAAAATCTTCAACGGGGTTAATTGTGGCCATCGTGACTCCAATTACTGTCTCCCTACTGCTTTTCGTCGGCTGGTGTTACCTGCGCCGAAGACCAAAGACGAAGAAATACTCTGCTGTAGAGGAAAATAGTGTTGTTAATGAGATGACCACTGTGGAATCTCTGCAATTTGATTTCAATACAATCGATGCTGCTACTAACCATTTCTCAGCGGAGAACAAACTGGGTGAAGGTGGATTTGGTCCGGTCTACAAGGGTAGGCTTGACAATGGACAAGAGATAGCAGTGAAGAGATTATCAAGAAGATCTTTGCAAGGTGCTGAAGAGTTCAAGAATGAGGTCACGTTGGTTGCTAAGCTTCAACATAGAAATCTTGTAAGGCTATTGGGATTCTGTTTGGAGGGTGAAGAAAAGTTACTCGTCTATGAATACATTCCCAACAAAAGCCTTGACTATTTCCTATTTGACTCGAAGAGACAGAGAGAATTGGATTGGTTGAACCGATGTAAGATCGTTAATGGCATTGCTCGTGGGATTTTGTATCTCCATGAAGATTCTCGACTTAGAATTATTCATCGTGATCTTAAAGCTAGTAACGTCTTGTTAGATGAGGATATGAATCCAAAAATTTCTGACTTTGGAATGGCAAGGATTATACAAGTGAATCAAAATCAAGCAAATACAAACCGAATTGTTGGTACCTATGGTTACATGTCTCCTGAATATGCAATGCATGGAAATTTCTCTACAAAATCTGATGTGTATAGCTTCGGAGTCTTAGCTTTGGAGATTATAAGCGGCAAGAAAAATAGCACATTTTATCTATCAGAGCTTGCTGAAGACATTTTAACCTATGCATGGAGACTATGGAAGGACGAGATGCCATTAGAACTATTGGATCCAAGTCTGCTAAATAACTATTCAAGAAATGAGGTGCTCAGATGCATCCATATTGCTTTACTATGTGTTCAAGATGATCCTAATCGTAGACCCTCCATGGCATCTGTTGTTCTTATGCTCAGCAGTTATTCAGTTCCTTTGCCTTTGCCAGAAGAGCCAACAATATTCATGCACAATACAGACAATAATGCCATTATAATTGATAGTGATCAATTTGCAAGTAATCTGTTGATTTCATCTACCAATGAAATATCTATAACTGAGTTGCACCCGCGATGA 2040 43.53 MAGRRSANLDMLKFPIFLFLLSCVIPGNAQISVPSLPYRGCLDANFTPMSTYQSNLNLLFSDLSTVAPVSRFYNTSIGQTPNDTVYGLFQCQGYVSNQNCRGCVAEATRDIAQRYCPLRKGAVAWFDECILRYSDQSFFSTVSTEPSLLLLNTGDIDVDKSRFNQLVMSTLRATASLAANASSVGELFATQEANFTSDLTLYTLAQCTGDLSNSDCEECLRQATNYIPSCCTNKRGGRVLFPSCYVRYEVYSFYELTPKDPVPPPEPSTPNSTTPTPPLPPPPPPGERKSSTGLIVAIVTPITVSLLLFVGWCYLRRRPKTKKYSAVEENSVVNEMTTVESLQFDFNTIDAATNHFSAENKLGEGGFGPVYKGRLDNGQEIAVKRLSRRSLQGAEEFKNEVTLVAKLQHRNLVRLLGFCLEGEEKLLVYEYIPNKSLDYFLFDSKRQRELDWLNRCKIVNGIARGILYLHEDSRLRIIHRDLKASNVLLDEDMNPKISDFGMARIIQVNQNQANTNRIVGTYGYMSPEYAMHGNFSTKSDVYSFGVLALEIISGKKNSTFYLSELAEDILTYAWRLWKDEMPLELLDPSLLNNYSRNEVLRCIHIALLCVQDDPNRRPSMASVVLMLSSYSVPLPLPEEPTIFMHNTDNNAIIIDSDQFASNLLISSTNEISITELHPR 679
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 5774095 5776725 + Lag0024790.1 Lac10g0745 583276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac10g0745 679 ProSitePatterns Serine/Threonine protein kinases active-site signature. 477 489 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Lac10g0745 679 ProSiteProfiles Protein kinase domain profile. 356 631 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac10g0745 679 ProSiteProfiles Gnk2-homologous domain profile. 144 253 IPR002902 -
Lac10g0745 679 Gene3D Phosphorylase Kinase; domain 1 318 431 - -
Lac10g0745 679 Gene3D Transferase(Phosphotransferase) domain 1 432 633 - -
Lac10g0745 679 MobiDBLite consensus disorder prediction 259 289 - -
Lac10g0745 679 FunFam cysteine-rich receptor-like protein kinase 10 432 634 - -
Lac10g0745 679 Gene3D - 35 138 IPR038408 -
Lac10g0745 679 Gene3D - 148 253 IPR038408 -
Lac10g0745 679 SMART serkin_6 356 631 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac10g0745 679 SUPERFAMILY Protein kinase-like (PK-like) 341 657 IPR011009 -
Lac10g0745 679 Pfam Protein tyrosine and serine/threonine kinase 358 624 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Lac10g0745 679 FunFam Cysteine-rich receptor-like protein kinase 25 146 253 - -
Lac10g0745 679 ProSiteProfiles Gnk2-homologous domain profile. 34 138 IPR002902 -
Lac10g0745 679 Pfam Salt stress response/antifungal 160 250 IPR002902 -
Lac10g0745 679 Pfam Salt stress response/antifungal 44 136 IPR002902 -
Lac10g0745 679 FunFam Cysteine-rich receptor-like protein kinase 10 317 431 - -
Lac10g0745 679 MobiDBLite consensus disorder prediction 259 288 - -
Lac10g0745 679 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 81 643 - GO:0004674(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)|GO:0042742(PANTHER)
Lac10g0745 679 CDD STKc_IRAK 362 627 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac10g0738 Lac-Chr10:5726396 Lac10g0745 Lac-Chr10:5774095 3.20E-115 dispersed
Lac10g0741 Lac-Chr10:5745812 Lac10g0745 Lac-Chr10:5774095 1.80E-268 dispersed
Lac10g0745 Lac-Chr10:5774095 Lac1g3246 Lac-Chr1:52355551 1.20E-150 dispersed
Lac13g1400 Lac-Chr13:13574978 Lac10g0745 Lac-Chr10:5774095 8.50E-88 dispersed
Lac8g0254 Lac-Chr8:2842891 Lac10g0745 Lac-Chr10:5774095 9.30E-84 dispersed
Lac8g1935 Lac-Chr8:37711359 Lac10g0745 Lac-Chr10:5774095 4.30E-17 dispersed
Lac10g0744 Lac-Chr10:5765074 Lac10g0745 Lac-Chr10:5774095 1.70E-245 tandem
Lac10g0745 Lac-Chr10:5774095 Lac10g0746 Lac-Chr10:5781596 8.10E-272 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85647 PF07714 PK_Tyr_Ser-Thr 3.50E-49 CL0016 Lac PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac10g0745 - - - 0.0