Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac10g0746 ATGCTCAATTTTCTAACTTTCCTCTTCCTCCTCTGTTTCCTTATCCATGGAAACGCTCAGACCCCAGTTTCTTACCCATATCGCAGTTGCTTTTCCGGCAATTTCACCCAGAACAGCACCTACCAGTCCAACCTCAATCTTCTCTTTTCAAATCTCACCTCCAACGGCCCCCAAACAAATCGATTCTTCAACACTTCCGTCGGCCGCACACCAAACGACACCGTTTACGGTCTATTCCAGTGCCGTGGAGACGTCACCAACGCCGCCTGCCGAACTTGCTTGGCCACCGCCACCAGAGACACAGCTCGGCTGTACTGTCCCCTGAGAAAAGGCGCTGTGGTTTGGGTCGACGAATGCATACTTCGCTATTCCGATCAATCTTTCTTTTCCACCGTCTCCACAGAGCCAAGTTTGCAATTACTGAATACGGGCGATATAGACGTCGACAAGGCTCGATTCAACCAACTGGTCATGTCCACGTTGAGGAACACCGCAGCTCGGGCGGCCAACTCCTCTTCGGTGGGCGAATTGTTTGCAACCCAGCAGGCTAATTTCACATCAGATCTCACTCTTTACACATTTGCACAATGTACCGGCGATTTGTCCAGTACGGATTGCGAAGAATGCTTACGACAAGCTACCAATGATATTCCCAGTTGCTGCACTAATAAACGAGGTGGGAGAGTTTTGTTACCCAGCTGTTTCGTTCGTTACGAAGTTTACATGTTTTACGAACTCACGCAAACGAATTCGGCACCGCCTCCGGCAACTCCCACTCCCAATTCGACAACTCCAACACCACCTCGTCTTCCTTCATCTCCTCCGCCAGAGGACGACAGATCCTCAACTGTGTTAATTGTGGCCATTGCGGCTCCAATTGCCATCTCCATACTGCTATTTGTTCTGGGATGTTGTTTCCTGCGCCGAAGAGCCAAGAAGAGATACTCTGCTGCAAAGGAAGATAGTGTTGTTAACGAGATGACCACAGTGGAATCTCTGCAATTTGATTTCAAAACAATCGACGCTGCTACTAACAAATTCTCAGAGGAAAACAGGTTGGGAGAAGGCGGGTTTGGTGCAGTCTTTAAGGGTAGACTTGATAATGGACAAGAGATAGCTGTGAAAAGACTATCAAGAGGATCCCTGCAAGGTTCCGAAGAGTTTAAGAATGAGGTGATGTTAGTTGCTAAGCTTCAACATAGAAATCTAGTGAGGCTATTGGGATTCTGCTTGGAGGGTGAAGAAAAGATTCTCATCTATGAATACATTCCCAACAAAAGCCTTGACTTTTTCTTATTTGATCCAGAAAGACAAATAGAGTTGGATTGGTTGAAACGATATAAGATCATCAATGGAATTGCTCGAGGAATACTATATTTGCATGAAGATTCTCGTCTTCGAATTATTCATCGTGATCTTAAAGCAAGTAACATCTTGTTAGATGGAGATATGAATGCAAAAATTTCAGATTTTGGCATGGCAAGAATTATTCAAGTGGATCAAACTCAAGGAAATACAAGTAGGATTGTTGGTACCTACGGTTACATGTCTCCCGAATATGCAATGCATGGAAACTTCTCTATGAAGTCAGATGTGTATAGCTTTGGAGTTTTAGTCTTGGAGATTTTAAGTGGCAAGAAAAACAACACCTTTTACTTGTCAGATCTTGCCGAAGACATTTTGACCTATGCTTGGAAACTATGGAAGGATGGAATACCATTAGAATTATTGGACCCAAGTTTGAGAGATAGTTACTCAAGAAATGAGGTGCTTAGATGCATTCATATTGCTTTATTATGTGTTCAAGAGGATCCTAGTAGTAGACCTTCCATGGCATCCATTGTTCTCATGCTTAATAGTTATTCGGTTACTTTGCCATTGCCCGAAGAGCCAGCATTCTTCATGCGCAGTAAAGACCATGGCATTATAACAGATAGTGATCAATCTACAAACAGGTCTCTCCAGTGGTCTGTCAATGAAACATCTATATCTGAATTGCATCCACGATGA 2010 43.98 MLNFLTFLFLLCFLIHGNAQTPVSYPYRSCFSGNFTQNSTYQSNLNLLFSNLTSNGPQTNRFFNTSVGRTPNDTVYGLFQCRGDVTNAACRTCLATATRDTARLYCPLRKGAVVWVDECILRYSDQSFFSTVSTEPSLQLLNTGDIDVDKARFNQLVMSTLRNTAARAANSSSVGELFATQQANFTSDLTLYTFAQCTGDLSSTDCEECLRQATNDIPSCCTNKRGGRVLLPSCFVRYEVYMFYELTQTNSAPPPATPTPNSTTPTPPRLPSSPPPEDDRSSTVLIVAIAAPIAISILLFVLGCCFLRRRAKKRYSAAKEDSVVNEMTTVESLQFDFKTIDAATNKFSEENRLGEGGFGAVFKGRLDNGQEIAVKRLSRGSLQGSEEFKNEVMLVAKLQHRNLVRLLGFCLEGEEKILIYEYIPNKSLDFFLFDPERQIELDWLKRYKIINGIARGILYLHEDSRLRIIHRDLKASNILLDGDMNAKISDFGMARIIQVDQTQGNTSRIVGTYGYMSPEYAMHGNFSMKSDVYSFGVLVLEILSGKKNNTFYLSDLAEDILTYAWKLWKDGIPLELLDPSLRDSYSRNEVLRCIHIALLCVQEDPSSRPSMASIVLMLNSYSVTLPLPEEPAFFMRSKDHGIITDSDQSTNRSLQWSVNETSISELHPR 669
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 5781596 5784243 + Lag0024791.1 Lac10g0746 583277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac10g0746 669 ProSiteProfiles Gnk2-homologous domain profile. 134 243 IPR002902 -
Lac10g0746 669 FunFam Cysteine-rich receptor-like protein kinase 25 136 243 - -
Lac10g0746 669 ProSitePatterns Protein kinases ATP-binding region signature. 353 375 IPR017441 GO:0005524(InterPro)
Lac10g0746 669 Gene3D Transferase(Phosphotransferase) domain 1 423 625 - -
Lac10g0746 669 MobiDBLite consensus disorder prediction 249 279 - -
Lac10g0746 669 ProSiteProfiles Gnk2-homologous domain profile. 23 128 IPR002902 -
Lac10g0746 669 SUPERFAMILY Protein kinase-like (PK-like) 332 651 IPR011009 -
Lac10g0746 669 ProSiteProfiles Protein kinase domain profile. 347 622 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac10g0746 669 MobiDBLite consensus disorder prediction 253 275 - -
Lac10g0746 669 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 131 634 - GO:0004674(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)|GO:0042742(PANTHER)
Lac10g0746 669 CDD STKc_IRAK 353 619 - -
Lac10g0746 669 Gene3D Phosphorylase Kinase; domain 1 308 422 - -
Lac10g0746 669 Gene3D - 136 243 IPR038408 -
Lac10g0746 669 Gene3D - 23 128 IPR038408 -
Lac10g0746 669 FunFam cysteine-rich receptor-like protein kinase 10 423 625 - -
Lac10g0746 669 SMART serkin_6 347 622 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac10g0746 669 Pfam Salt stress response/antifungal 151 240 IPR002902 -
Lac10g0746 669 Pfam Salt stress response/antifungal 30 126 IPR002902 -
Lac10g0746 669 FunFam Cysteine-rich receptor-like protein kinase 10 309 422 - -
Lac10g0746 669 ProSitePatterns Serine/Threonine protein kinases active-site signature. 468 480 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Lac10g0746 669 Pfam Protein tyrosine and serine/threonine kinase 350 616 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Lac10g0746 669 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 23 128 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac10g0731 Lac-Chr10:5680441 Lac10g0746 Lac-Chr10:5781596 5.60E-138 dispersed
Lac10g0737 Lac-Chr10:5722742 Lac10g0746 Lac-Chr10:5781596 1.80E-161 dispersed
Lac10g0739 Lac-Chr10:5729761 Lac10g0746 Lac-Chr10:5781596 4.20E-163 dispersed
Lac10g0743 Lac-Chr10:5758141 Lac10g0746 Lac-Chr10:5781596 0.00E+00 dispersed
Lac10g0744 Lac-Chr10:5765074 Lac10g0746 Lac-Chr10:5781596 1.80E-268 dispersed
Lac10g0746 Lac-Chr10:5781596 Lac1g3245 Lac-Chr1:52348334 4.90E-152 dispersed
Lac10g0748 Lac-Chr10:5790751 Lac10g0746 Lac-Chr10:5781596 1.00E-54 dispersed
Lac10g0749 Lac-Chr10:5795792 Lac10g0746 Lac-Chr10:5781596 2.30E-58 dispersed
Lac12g0635 Lac-Chr12:6705501 Lac10g0746 Lac-Chr10:5781596 1.10E-32 dispersed
Lac10g0745 Lac-Chr10:5774095 Lac10g0746 Lac-Chr10:5781596 8.10E-272 tandem
Lac10g0746 Lac-Chr10:5781596 Lac10g0747 Lac-Chr10:5787289 6.80E-64 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85648 PF07714 PK_Tyr_Ser-Thr 2.50E-48 CL0016 Lac PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac10g0746 - - - 0.0