Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac10g0753 ATGTGGGCTCTTGCAGCAGCAGCAGCAATGCTTTCGTCAAGATTCCTCTGTTTCCTCTGCTTCAATTTCTTCTTCACACCCATTTTCCACCGCCTGGCAATCGCTCAGCAGCCAGATTTTCAAGTTTATATCTGCCTCGAAAACCAAGGCAACTTCACCGCTAACAGCACCTACAAAGCCAACCTCGATCACCTCCTCTCCACCTTCACCACCGCCCGCCAAATCGACTATGGCTTCTACAACTTCTCTTACGGCGGCCATGATAGTCTCGACAGAGCCAACCTGATTGGGCTGTGCAGAGGAGACCTTATGCCAGACGCTTGCCGCAGATGCCTCGACAACTCCACAACTCTTCTCCTCTCGCAGTGTCCCACCCAGAAGGAAGCCATTGGATGGTACGATGACTGCATGCTCCGTTACTCCAACCGCTCCATATTCGGCTCAGTCGAGATTACTCCTGGTTTCCGTGGCTGGAACCCCACTAATGCTTCCAACCCCAATCGGTTCACCCAGATTGCAAGAAATTTGCTTCAACAACTCACCACCAAAGCCGCATCGGGCGATTCTCGTCTAAAGTTCGCCGCTGGAATCACATCAATTCCCAACTTCCCAACAATTTATGGAGCTGTGCAGTGCACCCCTGATTTGTCTGCCCAAGATTGCAGCACCTGCTTGCTTGGAGCTCTTGAACTAATTCGAAACTGCTGTGATGGGAAGATTGGAGGTAGAATTGGGAGACCCAGTTGTAATTTCAGATTTGAGAGCTACCTTTTCTTTCAGCAACCGTTGGTTTCTTCAACGCCATCTCCAGAGCCAGCACCTGCACCATCTCCTTTTCAGTCAAGTTTAAATACACTTCCACAGGGAAAAGCATCTCGACGAGTCATCAGCATAGTTGTGCCAATTGTTCTGGCCGTCATAGCTACTGTGATAGTAACAATCAGCATCAGCATCTGTATCTTCTTAAGTAAAAGAAAGCCAAGACGCTATGCAGATTCAAGTCTGCCTAACGATGAAGATAAAGATTTAGAGTCTTCGCAATTCGATTTTGACACGATTAGAAATGCAACCAATGGATTCTCTGAAGCAAACAAACTAGGGGAAGGTGGCTTTGGAGCGGTTTACAAGGGTCGACTCCCCAATGGACAAACTGTAGCTGTCAAACGACTCTCTCGAGGCTCAAGTCAAGGAGATGATGAATTTAAGAATGAAATTTTATTAGTGGCTAAACTTCAGCATCGAAATTTAGTTCAGCTCTTGGGTTTCTGCTTGAGAGAAGATGAAAAACTTCTCATATATGAGTTTGTAGAAAACTCAAGTCTTGAGAAATTCCTATTTAATCCTCTTAAACGTGTGAGTTTAGATTGGAAAACTCGCTACAATATTATAGGAGGGATTGCTCAAGGACTTGTTTACCTTCATGAAGACTCTCAACTTAGAATTATACATCGAGATCTCAAAGCTAGTAATATTTTACTAGACTCAAAGATGAATGCTAAAATTTCTGATTTTGGCACTGCAAGATTATTCTTACAAGATCAAACACAAGGAGATACAAGAAGAATCGTTGGCACTTATGGATATATGGCTCCAGAGTATGTACAGAAGGGTCATTTCTCAATTAAGTCAGATGTCTTCAGCTTTGGTGTTTTAGTTTTGGAGATTGTGACTGGACTGGAAAATAATCGAGTTCAAATTGACAATGAGATTATAGGTCTTATTAGCCATGCTTGGAGAAATTGGCAAAATGGAACCACTCTACAAATTGTAGATCCTTATTTGAAAAGTGGTTCAAGAACAGAAATGGTTAGATGCATTCATATTGGATTGTTGTGTGTTCAAGAAAATGTAGCTAAGAGGCCAACAATGGCTACCATACTTCTCATGCTTAACAGAGACTCCGCCATTCTTCCAAGACCTTCTCAACCTGCTTTCATTGTTGATAGTACCAACTCTCAAACATCTAGTCAATTTGAAAATAACTTAACTCAAGAACTAAACAATATGTCAATTACCGAGTTTTATCCTCGTTAG 2034 42.87 MWALAAAAAMLSSRFLCFLCFNFFFTPIFHRLAIAQQPDFQVYICLENQGNFTANSTYKANLDHLLSTFTTARQIDYGFYNFSYGGHDSLDRANLIGLCRGDLMPDACRRCLDNSTTLLLSQCPTQKEAIGWYDDCMLRYSNRSIFGSVEITPGFRGWNPTNASNPNRFTQIARNLLQQLTTKAASGDSRLKFAAGITSIPNFPTIYGAVQCTPDLSAQDCSTCLLGALELIRNCCDGKIGGRIGRPSCNFRFESYLFFQQPLVSSTPSPEPAPAPSPFQSSLNTLPQGKASRRVISIVVPIVLAVIATVIVTISISICIFLSKRKPRRYADSSLPNDEDKDLESSQFDFDTIRNATNGFSEANKLGEGGFGAVYKGRLPNGQTVAVKRLSRGSSQGDDEFKNEILLVAKLQHRNLVQLLGFCLREDEKLLIYEFVENSSLEKFLFNPLKRVSLDWKTRYNIIGGIAQGLVYLHEDSQLRIIHRDLKASNILLDSKMNAKISDFGTARLFLQDQTQGDTRRIVGTYGYMAPEYVQKGHFSIKSDVFSFGVLVLEIVTGLENNRVQIDNEIIGLISHAWRNWQNGTTLQIVDPYLKSGSRTEMVRCIHIGLLCVQENVAKRPTMATILLMLNRDSAILPRPSQPAFIVDSTNSQTSSQFENNLTQELNNMSITEFYPR 677
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 5813722 5816274 + Lag0024798.1 Lac10g0753 583284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac10g0753 677 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 175 646 - GO:0004674(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)|GO:0042742(PANTHER)
Lac10g0753 677 Pfam Salt stress response/antifungal 162 256 IPR002902 -
Lac10g0753 677 Pfam Salt stress response/antifungal 45 143 IPR002902 -
Lac10g0753 677 ProSitePatterns Protein kinases ATP-binding region signature. 366 388 IPR017441 GO:0005524(InterPro)
Lac10g0753 677 FunFam Cysteine-rich receptor-like protein kinase 10 154 258 - -
Lac10g0753 677 Gene3D Transferase(Phosphotransferase) domain 1 436 637 - -
Lac10g0753 677 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 38 145 - -
Lac10g0753 677 ProSitePatterns Serine/Threonine protein kinases active-site signature. 481 493 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Lac10g0753 677 Pfam Protein tyrosine and serine/threonine kinase 363 627 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Lac10g0753 677 Gene3D Phosphorylase Kinase; domain 1 323 435 - -
Lac10g0753 677 ProSiteProfiles Gnk2-homologous domain profile. 151 258 IPR002902 -
Lac10g0753 677 CDD STKc_IRAK 366 632 - -
Lac10g0753 677 SMART serkin_6 360 637 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac10g0753 677 ProSiteProfiles Gnk2-homologous domain profile. 40 145 IPR002902 -
Lac10g0753 677 SUPERFAMILY Protein kinase-like (PK-like) 344 664 IPR011009 -
Lac10g0753 677 Gene3D - 39 144 IPR038408 -
Lac10g0753 677 Gene3D - 154 258 IPR038408 -
Lac10g0753 677 FunFam Cysteine-rich receptor-like protein kinase 28 436 638 - -
Lac10g0753 677 ProSiteProfiles Protein kinase domain profile. 360 645 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac10g0753 677 FunFam Cysteine-rich receptor-like protein kinase 10 323 435 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac10g0753 Lac-Chr10:5813722 Lac1g3245 Lac-Chr1:52348334 2.30E-170 dispersed
Lac1g2193 Lac-Chr1:43375153 Lac10g0753 Lac-Chr10:5813722 1.00E-42 dispersed
Lac10g0753 Lac-Chr10:5813722 Lac10g0754 Lac-Chr10:5828947 1.20E-198 tandem
Lac10g0253 Lac-Chr10:1956134 Lac10g0753 Lac-Chr10:5813722 9.60E-24 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85649 PF07714 PK_Tyr_Ser-Thr 1.50E-48 CL0016 Lac PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac10g0753 - - - 0.0