Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac10g0755 ATGTTCCACTCGACCCTTCTCTTTATCATCATCTTCATCGTCAGCCCGGCAACAGCTCAGCCAAGCTTCTCTTGTTCAAACGACAATGGCAATTACACGGCCAACAGCACTTACAGAGCCAATCTCCGGCGCCTCCTTTCCTCAGTCCCGACCGACAAACGCCTCGACAAAGGCTTTCTCAACATTTCCTACGGCAAAAACGCCGACAGAGTCAATGCCATCGCGCTCTGCAGAGGGGATCTTAAGCCAGAGCCGTGCCGGCGTTGCCTCAGCGACTCTGTTTTGGAGCTTCCACAGAAATGTCCGAATCAAATGGAAGCTACGATTTGGTTCGAAGATTGCATGTTTCGGTATTCGGATCGACGGATTTATGGGGTTTTGGAAGAAAGTCCTGCTTTTTATCTGTATAATCTTGAAGATGCGGCGGATTTGCAGGGGTTCAGCCAGGTGGTGCAGGGGCTACTGGCTGAGCTTACGGAGGAGGCTGGGTTGGGAGATTCTAAGCTGAAATTTAGTGCTGGGAATGTCAGCTATGAGGATGGGGATTATAAGTATGTTTATGGAATGGTGCAGTGCACGCCGGATATGTCGCAGCCGCAGTGCGTGGATTGCTTGCAAGCTGCTGCTGGGGCTGTTCTAACATGGATTCCAGGGAAGATTGGAGCAAGAATTCTTGGTCCCAATTGTTATATTAGGTATGAGATTTCTAGGTTCTTTGACCCTACAGCTGTTTCGAGAGTTTCCCGGTCGCCGCCTCCACCGACGCCACCGTCGCCGCCGCTCTTGCCTCCCTCTCTTTCACCAAATATAACTACAAATGCAGAAGTAAAAATCGCCGTCGATGAGGCCGCCGCTAGGGCTAACAGCCTCGCCCTCGTTTTCAAGCTCCGCTGCCAGCGGAATCTCGGCGATAGGGACGTCGGCGAGGTCTATGTTCCGGTGAAGGAGCTTCTCAATTCCGCCGATGACGGCAAAGGCGATTTGATGCAGCATCTTAGTTATCAGGTGAGAAAACCGTCTGGAAATCCCCAGGGGGTCTTGAATATCGCTTTCAAATTTGGGGGAAATTTGCCCTCCGGTCCCGTTAAACCGGATACGGTTCAGTCTTACACCCCGGTTTCCGCCTACCCGGCACCGCCGCCGTCGGAGCCGAGTTCTTTCGCCGCCATTGCTCATGGTGCGGCTTATCCTCCGCCGCCGACGCCTCCTCCTAAGCCGGAAGCTTACCCTCCGCCCTCGAATTTGTACCCGGTCCTTCCGCCGAAAGACATGGCGCCAGAGATTGGATATAGTGCTTACCCGCCGCCGGCTGGATACAGCGCATACCCTCCGGTGCCGTCGTATAGCTCGTACGCGCCGGCACCGCCGTACAGCTCGTACGCGCCGGCGCCGCCATCTCAACCGGTGTATGGTCGACTGCGACGGAAGGGGTTTGCCAGTAGTGGAGAGGGAGATGTAGAGAAGTGGGGTGGCGATTTTTACGGTGGCGGGATGGTGGTTGTGGGGTCGCCGGCGGGGAGAAAAAGAGAGCGTAGGTGGGGACGAGGGGCGGCGGGGAGAAAAAGAAACGAGTCTAAGAGATTAAAGACTGCCATCATCATAGTTCTGCCAATTGTTGTGGTTGTTGTACTTGTGGTATTAATTATCAGCATCTTCATCTTTTTAAGAGCAAGAAAACAAAGGGTCTATGGAGTTGCAAGTTTAGAAGTGGATGAAACTGCAGATCTGGAAACTTTGGTATTTGATATCAGTACTATAAGAACTGCAACAGATAACTTCTCAGATGCAAATAACATTGGACAAGGTGGATTTGGAGCTGTTTACAAGGGAAGGCTTGTCAATGGACAAGATATAGCAGTGAAAAGGCTGTCTCAGAACTCAATGCAAGGAGAAAGTGAGTTCAAGAATGAAGTACTGTTAGTGGCTAGACTTCAACACCGGAATTTAGTTCGGTTTCTTGGTTTCTGTCTCCATGAAGACGAAAGGCTTTTGGTGTATGAGTTTGTGCACAACTCGAGTCTTGATAAGTTCATATTTGATCCATTAAAACGTCAAGATTTGGACTGGGAAACGCGCTACAAAATCATTGGAGGCATTGCTCGGGGCCTTGTTTATCTTCATGAAGATTCTCAAATTAAAGTCATTCATCGAGATCTCAAAGCTGCTAATGTTTTATTAGATGCAGAAATGAATCCAAAAATTTCGGATTTTGGCATGGCAAAGTTGTTTCAGCAAGATCAAACACAAGGAGCTACAAGTAGAATTGTTGGCACTCAAGGGTACATGGCTCCGGAATATGCAATGCATGGAAAGTTCTCAATCAAGTCAGATGTGTTCAGTTTTGGTGTGTTAGTCTTGGAGGTTGTGACCGGTCAGAAAAACAGCTCTTTCCAACACAAGGAGAATATAGACGATCTTATAAGCTATGTATGGAGAAACTGGAGGGCAGGAACAGCACTAAATGTTGTGGATCCCAATTTGAGAGGTGGCTCAAGTTGTGAAATGAAGAAATGCATCAACATTGGTTTGCTTTGTGCTCAAGAAAATTCAGCTGACAGACCAACTATGAACACAGTACTTCTCATGCTTAGTAGTGACTCAGTCACTCTCCCAATACTTTCTCCACCAGCTGACTTCATGAACAGGAGCCCCAAACCAGACATGTCTGCTTCACAAGGGAGGTGTAGTTCCCATGTGATAGAGATGGAATGA 2712 48.93 MFHSTLLFIIIFIVSPATAQPSFSCSNDNGNYTANSTYRANLRRLLSSVPTDKRLDKGFLNISYGKNADRVNAIALCRGDLKPEPCRRCLSDSVLELPQKCPNQMEATIWFEDCMFRYSDRRIYGVLEESPAFYLYNLEDAADLQGFSQVVQGLLAELTEEAGLGDSKLKFSAGNVSYEDGDYKYVYGMVQCTPDMSQPQCVDCLQAAAGAVLTWIPGKIGARILGPNCYIRYEISRFFDPTAVSRVSRSPPPPTPPSPPLLPPSLSPNITTNAEVKIAVDEAAARANSLALVFKLRCQRNLGDRDVGEVYVPVKELLNSADDGKGDLMQHLSYQVRKPSGNPQGVLNIAFKFGGNLPSGPVKPDTVQSYTPVSAYPAPPPSEPSSFAAIAHGAAYPPPPTPPPKPEAYPPPSNLYPVLPPKDMAPEIGYSAYPPPAGYSAYPPVPSYSSYAPAPPYSSYAPAPPSQPVYGRLRRKGFASSGEGDVEKWGGDFYGGGMVVVGSPAGRKRERRWGRGAAGRKRNESKRLKTAIIIVLPIVVVVVLVVLIISIFIFLRARKQRVYGVASLEVDETADLETLVFDISTIRTATDNFSDANNIGQGGFGAVYKGRLVNGQDIAVKRLSQNSMQGESEFKNEVLLVARLQHRNLVRFLGFCLHEDERLLVYEFVHNSSLDKFIFDPLKRQDLDWETRYKIIGGIARGLVYLHEDSQIKVIHRDLKAANVLLDAEMNPKISDFGMAKLFQQDQTQGATSRIVGTQGYMAPEYAMHGKFSIKSDVFSFGVLVLEVVTGQKNSSFQHKENIDDLISYVWRNWRAGTALNVVDPNLRGGSSCEMKKCINIGLLCAQENSADRPTMNTVLLMLSSDSVTLPILSPPADFMNRSPKPDMSASQGRCSSHVIEME 903
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 5833192 5838013 + Lag0024800.1 Lac10g0755 583286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac10g0755 903 ProSiteProfiles Protein kinase domain profile. 593 873 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac10g0755 903 FunFam Cysteine-rich receptor-like protein kinase 28 669 871 - -
Lac10g0755 903 ProSitePatterns Protein kinases ATP-binding region signature. 599 621 IPR017441 GO:0005524(InterPro)
Lac10g0755 903 Pfam Protein tyrosine and serine/threonine kinase 597 859 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Lac10g0755 903 SUPERFAMILY Protein kinase-like (PK-like) 576 863 IPR011009 -
Lac10g0755 903 MobiDBLite consensus disorder prediction 247 266 - -
Lac10g0755 903 Gene3D Transferase(Phosphotransferase) domain 1 669 869 - -
Lac10g0755 903 ProSiteProfiles Gnk2-homologous domain profile. 129 238 IPR002902 -
Lac10g0755 903 SMART serkin_6 593 863 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac10g0755 903 MobiDBLite consensus disorder prediction 387 407 - -
Lac10g0755 903 ProSiteProfiles Gnk2-homologous domain profile. 20 123 IPR002902 -
Lac10g0755 903 FunFam Cysteine-rich receptor-like protein kinase 10 131 238 - -
Lac10g0755 903 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 19 123 - -
Lac10g0755 903 CDD STKc_IRAK 599 863 - -
Lac10g0755 903 Pfam Salt stress response/antifungal 145 234 IPR002902 -
Lac10g0755 903 Pfam Salt stress response/antifungal 25 120 IPR002902 -
Lac10g0755 903 Gene3D Phosphorylase Kinase; domain 1 557 668 - -
Lac10g0755 903 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 182 877 - GO:0004674(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)
Lac10g0755 903 FunFam Cysteine-rich receptor-like protein kinase 10 556 668 - -
Lac10g0755 903 Gene3D - 20 122 IPR038408 -
Lac10g0755 903 Gene3D - 132 238 IPR038408 -
Lac10g0755 903 MobiDBLite consensus disorder prediction 244 267 - -
Lac10g0755 903 MobiDBLite consensus disorder prediction 880 903 - -
Lac10g0755 903 ProSitePatterns Serine/Threonine protein kinases active-site signature. 714 726 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac10g0755 Lac-Chr10:5833192 Lac1g3246 Lac-Chr1:52355551 3.30E-143 dispersed
Lac6g2595 Lac-Chr6:43651439 Lac10g0755 Lac-Chr10:5833192 3.00E-10 dispersed
Lac7g0872 Lac-Chr7:7157079 Lac10g0755 Lac-Chr10:5833192 1.70E-65 dispersed
Lac10g0754 Lac-Chr10:5828947 Lac10g0755 Lac-Chr10:5833192 8.70E-135 tandem
Lac11g1390 Lac-Chr11:22818510 Lac10g0755 Lac-Chr10:5833192 3.70E-87 transposed
Lac1g2193 Lac-Chr1:43375153 Lac10g0755 Lac-Chr10:5833192 1.50E-102 transposed
Lac10g0258 Lac-Chr10:1975291 Lac10g0755 Lac-Chr10:5833192 2.90E-32 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85651 PF00069 Pkinase 1.80E-47 CL0016 Lac PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac10g0755 - - - 0.0