Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac10g0781 ATGAAACCCATCAGCTACACCATTCCGTTAATCCTTCTTCTTCTTTGCTTCGTTTTGATAGTTTCCAGCAGCGTAGATACGATCACATCCACACAATTCCTCAAAGACCCCGAAACTCTATTGTCCAATCGTGGCTTCTTCGAATTGGGTTTCTTCAGCCCTCTCAATTCGACCAACCGGTTCGGCGGAATTTGGGATAAACGAGTTCCTGTACGAACTGTCTTCTGGGTAGCTAACAGAGACAAACCTCTCAACAACAAATCCGGGGTTTTCGCCGTTTCCCAGGACGGGAATCTCGTTGTACTAGACGAACAGAACAGAGTTCTTTGGAGTTCGAATGCTTCAAACGCTGCAGTGAATTCCACTGCTCGACTTCTAGATTCTGGAAACCTTGTTCTGCTAGACCCTGCTTCAGGAACCATCATATGGGAGAGTTTCAAAGACCCATCAGACAAATTGCTGCCGATGATGAAATTCATCACGAACACAATCACAAACGAGAAAGTTGAAATCGTGTCATGGAAAAGCGCCTCAGATCCATCTTTGGGAAATTTCTCCTTTGGAATCGACCCTCTGACGATCCCAGAAGTTGTAATTTGGAAAAACGGCCGCCCGTATTGGAGGTCCGGTCCATGGGACGGCCAAGTTTTCACCGGAATACCCGGCATGAACACTGACTATCTTTATGGAGGTAATCTCGTAATCGAAAACAGAACTTACTCTCTCTCGATTGCCAATGCAAATGAAGCTCAGTTATTCTTCTATTACTTAAGCCCCAATGGTACTTTGGAAGAGAATCAATGGGATATTGAGGATCAGAAATGGGAGGTTTCGTGGTCAGCTCCCGAAACAGAGTGTGGTGTTTATGGCGCTTGTGGGGCATTTGGAGTCTGCGATTCTCAAAAAACCCCAATTTGCAGTTGTTTAAAGGGTTTTAGGCCAGAGAAGGAAGAGGAATGGAACAGAGGAAATTGGGGAAGTGGGTGTGTGAGGAATTCGCCATTGGAGTGTGAGAGGAAGAATATCAGTGTTGAAATGGGAAAAGAGGATGGGTTTTTGAAGGTGGGAATGGTTAAAGTTCCAGATTCTGCAGCTTGGTTTGTTGCTTCGGAAGAAGAGTGCAGAGCTCTGTGCTTGGCGAATTGTTCTTGTTCTGCTTATGCATATAGAACAGGGATTGGTTGTATGATATGGAGAGGAGGCTTGATTGACATTCAAAAGTTCAAGAATGGTGGAGTGGACATGAATGTTCGTGTGGCATATTCAGACATAATCGATGAAAGTGGAGCCACCAAAGATATGAAAGCAGTAATCATAGCTTCTGTGGTAACAGGAACTTTTATCCTTATATGCTGCATATATTGCTACTGGAAACATAAAAGTAAAAGCCAGATCAAGTTTTTGTTCAACACTGGTGCTATGAAGCATGAAAAAATGGATCAAGTTAAGCTCCAGGATCTGCCTCTTTTTGGTTTTGAGAAGCTGGCAACTGCAACTAACCATTTTCATTTCAATAACAAGCTTGGTCAGGGTGGGTTTGGGCCAGTGTACAAGGGAAAATTGGTAGATGGACAAGAAATAGCAGTAAAGAGGCTTTCGAAGACGTCAGGACAAGGACTCGAAGAGTTTACGAATGAAGTAATGGTGATTTCGAAACTACAACATAGAAATCTTGTCCAGCTATTTGGGTGTTGTGTGGAGGGAGAGGAAAGGATGCTGGTATATGAGTGCATGCCCAATGGAAGTTTGGATTCAATTATTTTTGATTCAACCAAAGGAAAAATTCTAGATTGGAGAAAAAGATTCAACATCATTGAAGGAATTGTTCGAGGACTCCTATATCTTCATAGAGATTCAAGGTTAAAGATCATTCATAGAGATCTCAAAGCTAGTAACATTTTACTAGATAAAGATTTAAATCCCAAAATTTCAGATTTTGGTACCGCTAGAATTTTTTACGGCAATGAAGCTCAAGCCAATACCAAAAGGGTCGTGGGAACTTATGGCTACATGTCTCCAGAATACGTGATGAATGGTCAATTCTCAGAGAAGTCTGATGTCTTTAGCTTTGGCGTTTTGTTGCTTGAAATTATTAGTGGAAGAAGAAATACAAGTTTTTATAACAGTGAACATGCCTTGAGCCTTCTGGGGTTTGCATGGAAATTATGGATCGAGAACAATTTAGTTGCTTTGATTGATCAAACAATGTTTGAATCACATTATCAAATAGAGATTTCAAGGTGCATTCATGTGGGACTGTTGTGTGTTCAAGAATTTGCATATGATAGACCAAATATACCGACAATTCTTTCTATGCTCCACAATGAGATCACAGATCTTCCAATGCCAAAGCAACCTGGATTTAGTAGCACGCAAATTGAGATTCGTACAGAAGCATTCGAACAAAACATTGGTGGAACTTGTTCAGCAAACATGATCACAATTACCTCATTTGAAGAGACAACCCAGTTACACTCCTCTGCCACTTTAAAATTCAATGGAGATGGAAACTTGGTTGTCGTCGATCAAAAGGGTGGAGCTTTTTGGTCTTCAAATTCGACAAGATCAGTTGAAAACCCTGAAGCTCAACTGCTGGATACTGGAAATTTCGTGTTAAGAGATTCAAATTCAAGGTCTGAAAACTATGAGTGGCAGAGTTTTGATTATCCCTCTGATACTCTGTTACCAGGTATGAAACTCGGGTGGGACTCCAAAACGGGTCTGAACCGAAAGTTGACATCGTGGAAAAGTTCAAGCGAGGCATCGTCAGGAGAATTCAGTTTTAGCCTCAACACAAATGGGCTTCCCCAATTCTTCGTTCGTAAAGGAAACAAGACGTTGTTTAGAGGCTGGCCTTGGTACGACCAAGAATTCGGCGAGGGTTATGGTAATGGCTTCGATTACAATCTCGTCTTTGATGCTTCGAATGAGATATCCTTTTCGTATAACGATTCAGCCAACAGCCGTACGAGAATCGTGATGGATTCAAGTGGGCCAGTTTATCGGTACGTGTGGAGCGACGTGGGAGAAGAATGGCAGAAAGCGTTCACGTTTGATGAAGCTGGTTGCAACAACTACGACTTGTGTGGGAATTTCGGTATTTGTAGTTCTGTAGTAACAACAAGTTGCAGCTGTTTAGTTGGGTTTGAACAAAAATCAGCTCAGAACTTTTCAGATGGGTGCGTGAGAAAGGATCCAGAGATCTGCAGAGCTGGAGATGGATTTAAAATGATAGGTAAAGTGAAATGGCCTGATTCTACAGGGGATTTGGTGAAAATGAAACTTGGTATTCAAGATTGTGCGGCAGAATGCTTGAAGGACTGCTCTTGCTTAGCCTATGGAACATTGAAAATTCCTAAAATCGGGGCTGGCTGTGTCAATTGGTTTAACGAATTGATTGATGTTAGACATATTCATGATGTTGGGTTTGGAGATTATCTCTACGTGAGAGTTGCCGCTTCAGAACTGGAGTCGGCTGATGAGAAGCCTAGTCTTGCTGTGGTTGTGGTTGTGCCAATCTTGTCAGTTATGGTTATTTTGGCTTTAATTGGGGGCTGGTTTATAATTAGGAGAAGAGCCAGAGGTAATAATGAAGTTGTGGTGATAGAGCCTCCAATTCAAGAAAATGATCTTGAGATGCCTATCAATATTATTGAAGCTGCTACGAAAAATTTCTCTATTTCTAATAAGATAGGAGAGGGTGGTTTTGGGCCAGTTTACAAGGGCAAGCTTCCAAGTGGGCAAGAAATTGCTGTAAAAAAACTAGCCGAAAGATCAGGTCAAGGGTTGCAGGAGTTCAAAAATGAGGTCCTTTTCATTTCTCAACTTCAACATCGAAATCTTGTCAAGCTTCTTGGTTTCTGCATCCACAATGAAGAAATTTTACTTATCTACGAATACTTGCCAAACAAAAGTTTGGATTGCTTCCTTTTCGATGATCAAAAACGTTCTTCACTCAATTGGCGAAAGAGAATTGATATCATAATTGGCATAGCTCGAGGGCTTCTATATCTCCATCGAGATTCAAGACTTAGAATAATACACAGAGATCTTAAAGCAGCTAATATTTTGTTGGATGGTAAAATGGAGCCAAAAATTTCAGACTTTGGCATGGCACGCATATTTGGCGAAGATCAAACAGAAACAAAAACAAGGAGAGTTGTTGGAACTTATGGCTACATGTCTCCAGAATATGCAATAGATGGTTACTTTTCAGTAAAGTCTGATGTTTTCAGCTTTGGAGTCATGGTTTTAGAAATAGTTAGTGGCAAGAAGAACAAAGGCTTTTTTCATCCCGAGCATCAACTAAATCTTCTTGGACATGCATGGAAACTTTGGAATGAAGGAAGGGCATTGGAATTAATAGATGTAATGTTGGAAGATCAATTCCATGAACATGAAGCTTTAAGATATATAAATATTGGGTTGTTATGTGTGCAAAGACGTCCAGAAGAAAGACCGATTATGTCATCTGTGCTTTCAATGTTGGAGAATAAAAACATGTCGTTAATACTTCCCGAACGACCTGGATTCTATGAGGAAAGATTTATAGTAGCTGATGTTGATTCGTCATTAGGTGATCAACTAACTTCCTCATCTAATAATGTTACTGTTACATTGCTAGATGGTCGTTAG 4635 40.86 MKPISYTIPLILLLLCFVLIVSSSVDTITSTQFLKDPETLLSNRGFFELGFFSPLNSTNRFGGIWDKRVPVRTVFWVANRDKPLNNKSGVFAVSQDGNLVVLDEQNRVLWSSNASNAAVNSTARLLDSGNLVLLDPASGTIIWESFKDPSDKLLPMMKFITNTITNEKVEIVSWKSASDPSLGNFSFGIDPLTIPEVVIWKNGRPYWRSGPWDGQVFTGIPGMNTDYLYGGNLVIENRTYSLSIANANEAQLFFYYLSPNGTLEENQWDIEDQKWEVSWSAPETECGVYGACGAFGVCDSQKTPICSCLKGFRPEKEEEWNRGNWGSGCVRNSPLECERKNISVEMGKEDGFLKVGMVKVPDSAAWFVASEEECRALCLANCSCSAYAYRTGIGCMIWRGGLIDIQKFKNGGVDMNVRVAYSDIIDESGATKDMKAVIIASVVTGTFILICCIYCYWKHKSKSQIKFLFNTGAMKHEKMDQVKLQDLPLFGFEKLATATNHFHFNNKLGQGGFGPVYKGKLVDGQEIAVKRLSKTSGQGLEEFTNEVMVISKLQHRNLVQLFGCCVEGEERMLVYECMPNGSLDSIIFDSTKGKILDWRKRFNIIEGIVRGLLYLHRDSRLKIIHRDLKASNILLDKDLNPKISDFGTARIFYGNEAQANTKRVVGTYGYMSPEYVMNGQFSEKSDVFSFGVLLLEIISGRRNTSFYNSEHALSLLGFAWKLWIENNLVALIDQTMFESHYQIEISRCIHVGLLCVQEFAYDRPNIPTILSMLHNEITDLPMPKQPGFSSTQIEIRTEAFEQNIGGTCSANMITITSFEETTQLHSSATLKFNGDGNLVVVDQKGGAFWSSNSTRSVENPEAQLLDTGNFVLRDSNSRSENYEWQSFDYPSDTLLPGMKLGWDSKTGLNRKLTSWKSSSEASSGEFSFSLNTNGLPQFFVRKGNKTLFRGWPWYDQEFGEGYGNGFDYNLVFDASNEISFSYNDSANSRTRIVMDSSGPVYRYVWSDVGEEWQKAFTFDEAGCNNYDLCGNFGICSSVVTTSCSCLVGFEQKSAQNFSDGCVRKDPEICRAGDGFKMIGKVKWPDSTGDLVKMKLGIQDCAAECLKDCSCLAYGTLKIPKIGAGCVNWFNELIDVRHIHDVGFGDYLYVRVAASELESADEKPSLAVVVVVPILSVMVILALIGGWFIIRRRARGNNEVVVIEPPIQENDLEMPINIIEAATKNFSISNKIGEGGFGPVYKGKLPSGQEIAVKKLAERSGQGLQEFKNEVLFISQLQHRNLVKLLGFCIHNEEILLIYEYLPNKSLDCFLFDDQKRSSLNWRKRIDIIIGIARGLLYLHRDSRLRIIHRDLKAANILLDGKMEPKISDFGMARIFGEDQTETKTRRVVGTYGYMSPEYAIDGYFSVKSDVFSFGVMVLEIVSGKKNKGFFHPEHQLNLLGHAWKLWNEGRALELIDVMLEDQFHEHEALRYINIGLLCVQRRPEERPIMSSVLSMLENKNMSLILPERPGFYEERFIVADVDSSLGDQLTSSSNNVTVTLLDGR 1544
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 6152636 6159898 - Lag0024826.1 Lac10g0781 583312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac10g0781 1544 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 1190 1300 - -
Lac10g0781 1544 Gene3D - 806 887 IPR036426 -
Lac10g0781 1544 Gene3D - 19 146 IPR036426 -
Lac10g0781 1544 CDD STKc_IRAK 1231 1498 - -
Lac10g0781 1544 CDD B_lectin 31 149 IPR001480 -
Lac10g0781 1544 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 1301 1504 - -
Lac10g0781 1544 Pfam Protein tyrosine and serine/threonine kinase 1227 1495 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Lac10g0781 1544 SUPERFAMILY alpha-D-mannose-specific plant lectins 824 919 IPR036426 -
Lac10g0781 1544 ProSiteProfiles Bulb-type lectin domain profile. 763 885 IPR001480 -
Lac10g0781 1544 SMART ntp_6 1070 1151 IPR003609 -
Lac10g0781 1544 SMART ntp_6 347 419 IPR003609 -
Lac10g0781 1544 Pfam D-mannose binding lectin 825 916 IPR001480 -
Lac10g0781 1544 Pfam D-mannose binding lectin 73 175 IPR001480 -
Lac10g0781 1544 CDD STKc_IRAK 508 773 - -
Lac10g0781 1544 CDD PAN_AP_plant 1070 1152 - -
Lac10g0781 1544 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 578 781 - -
Lac10g0781 1544 SUPERFAMILY Protein kinase-like (PK-like) 1212 1518 IPR011009 -
Lac10g0781 1544 SMART blect_4 784 890 IPR001480 -
Lac10g0781 1544 SMART blect_4 31 149 IPR001480 -
Lac10g0781 1544 CDD PAN_AP_plant 334 420 - -
Lac10g0781 1544 Gene3D Phosphorylase Kinase; domain 1 1188 1300 - -
Lac10g0781 1544 SUPERFAMILY Protein kinase-like (PK-like) 488 794 IPR011009 -
Lac10g0781 1544 SUPERFAMILY alpha-D-mannose-specific plant lectins 69 213 IPR036426 -
Lac10g0781 1544 Gene3D Transferase(Phosphotransferase) domain 1 578 782 - -
Lac10g0781 1544 Gene3D Transferase(Phosphotransferase) domain 1 1301 1504 - -
Lac10g0781 1544 CDD B_lectin 825 890 IPR001480 -
Lac10g0781 1544 Gene3D Phosphorylase Kinase; domain 1 475 577 - -
Lac10g0781 1544 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 16 787 - -
Lac10g0781 1544 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1346 1358 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Lac10g0781 1544 ProSiteProfiles Protein kinase domain profile. 1225 1504 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac10g0781 1544 Pfam PAN-like domain 1069 1135 IPR003609 -
Lac10g0781 1544 Pfam PAN-like domain 348 405 IPR003609 -
Lac10g0781 1544 FunFam receptor-like serine/threonine-protein kinase SD1-8 474 577 - -
Lac10g0781 1544 ProSiteProfiles PAN/Apple domain profile. 337 420 IPR003609 -
Lac10g0781 1544 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 21 146 - -
Lac10g0781 1544 ProSitePatterns Serine/Threonine protein kinases active-site signature. 623 635 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Lac10g0781 1544 ProSiteProfiles Bulb-type lectin domain profile. 25 146 IPR001480 -
Lac10g0781 1544 SMART serkin_6 1225 1469 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac10g0781 1544 SMART serkin_6 502 777 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac10g0781 1544 ProSiteProfiles Protein kinase domain profile. 502 777 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac10g0781 1544 Pfam S-locus glycoprotein domain 207 315 IPR000858 GO:0048544(InterPro)
Lac10g0781 1544 Pfam S-locus glycoprotein domain 965 1052 IPR000858 GO:0048544(InterPro)
Lac10g0781 1544 Pfam Protein kinase domain 502 705 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac10g0781 1544 ProSiteProfiles PAN/Apple domain profile. 1069 1151 IPR003609 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac10g0781 Lac-Chr10:6152636 Lac10g0783 Lac-Chr10:6163475 0.00E+00 dispersed
Lac10g0780 Lac-Chr10:6143020 Lac10g0781 Lac-Chr10:6152636 2.10E-242 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85654 PF07714 PK_Tyr_Ser-Thr 8.50E-48 CL0016 Lac PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac10g0781 - - - 0.0