Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac10g0783 ATGAAACCCATCAGCAATACCATTCCGTTAATCCTTCTTCTTCTTTGCTTCGTTTTGAAAGTTTCCAGCAGCATAGATACGATCAGATCCACACAATTCCTCAAAGACCCCGAAACTCTATTGTCCAATCGTGGCTTCTTCGAATTGGGTTTCTTCAGCCCTCTCAATTCGACCAATCGGTTCGTCGGAATTTGGGATAAACGAGTTCCTGTACCAACTGTCTTCTGGGTAGCTAACAGAGACAAACCTCTCAACAACAAATCCGGGGTTTTCGCCGTTTCCCAGGACGGGAATCTCGTTGTACTAGACGAACAGAACAAAGTTCTTTGGAATTCAAATGTTTCAAACGCTGCAGCGAATTCCACCGCTCGGCTTCTAGATTCTGGAAACCTTGTTCTGCAAGACCCTGCTTCAGGAACCATCATATGGGAGAGTTTCAAAGACCCATCAGACAAATTCTTGCCAATGATGAAATTCATCACGAACACGATCACAAAGGAGAAAATAGAACTCGTGTCGTGGAAAAGCCCTTCGAATCCATCTTCAGGAAATTTCTCCTACGGAATCGACCCTCTGTCAGCGATCCCTGAAGTTGTAATTTGGAAAAACGGCCGCCCGTTTTGGAGGTCCGGTCCATGGGACGGCCAAGTTTTCATCGGAATACCCGGCATGAGCCCTGACTATCTTCAAGGAGGTAGTATCGTAATTGAAAACAGAACTTACACTCTCTCAGTCACCAATGCAAACGAAACTCAGTTATTCTTCCATTACTTGAACTCTAATTGGGCTTTGGAAGAGAATCAATGGGATACTGAGGAGCAGAAATGGGAGGTTGTGTGGTCAGCCCCCGAAACAGAGTGTGGTGTTTATGGCGCTTGTGGAGCATTTGGAGTCTGTGACTCTCAGAAAACCCCAATTTGCAGTTGTTTGAAGGGGTTTAGGCCAGAGAATGAAGAGGAATGGAACAGAGGAATTTGGAGAAGTGGGTGTGTGAGGAATTCGCCATTGGAGTGTGAGAGGAAGAATATCAGTGTTGAAATGGGAGAAGAGGATGGGTTTTTGAAGGTGGGAATGGTTAAAGTTCCAGATTCTGCAGCTTGGTTTGTTGCTTCGGAAGAAGGGTGCAGAGTTCTGTGCTTGGCGAATTGTTCTTGTTCTGCTTATGCATATAGAACAGGGATTGGTTGTATGATATGGAGAGGAGGTTTGATTGACATTGAAAAGTTCAAGAATGGTGGAGCGGACATTAATGTTCGTGTGGCATATTCAGACATAGTCGATGAAAGTGGAGGCACCAAAGATATGAAAGCAGTAATCATAGCTTGCGTGGTAACAGGAACCTTTATCCTTATATGCTGCATATATTGCTACTGCAAGTTTGGAACAGGGAAAAAGAGAAGTAAAAGCCAGATGAAGATTTGGTTTAACACTAGGGATATGAAGAATGATAAAATGGATCAAGTTAAGCTCCAGGAGCTGCCTCTTTTTGGTTTTGAGAAGCTGGCAACTGCAACTGACCACTTTCATTTCAAGAACAAGCTTGGTCAGGGTGGGTTTGGTCCAGTGTACAAGGGAAAATTGGTAGATGGACAAGAAATAGCAGTAAAGAGGCTTTCAAGGACATCAGGACAAGGGCTTGAAGAATTTACAAATGAAGTAATGGTGATTTCAAAACTACAACATAGAAATCTTGTGCAGCTTTTTGGGTGTTGTGTGGAGGGAGAAGAAAGGATGCTAGTATATGAGTACATGCCTAATGGAAGTTTGGATTCAATTGTTTTTGATTCAATCAAAGGAAAAATTTTGGATTGGCAAAAAAAATTCAACATTATTGAAGGGATTGCTCGAGGACTTCTATATCTTCATAGAGATTCAAGGTTAAAAATCATTCATAGAGATCTCAAAGCTAGTAACATTTTACTAGACAGAGATTTAAATCCCAAGATTTCAGATTTTGGTACCGCAAGAATTTTTAACAGCAACGAAGCTCAAGCCAATACCACAAGGGTTGTGGGCACTTACGGCTACATGTCTCCTGAATACGTGATGAAAGGTCAATTCTCAGAGAAATCTGATGTCTTTAGCTTTGGTGTGTTATTGCTTGAAATTATTAGTGGAAGGAAGAATACAAATTTGCATCATAATGAACATATCTCGAGCCTTTTGGAATTTGCATGGAAATTATGGATTGAAGATAATTTGGGTCCTTTGATTGATCAAACAATGACCGAATCACATTATCAAATAGAGATTTCAAGGTGCATTCATGTGGGACTTTTGTGTGTTCAAGAATTTGCAAATGATAGACCAAATATACCTATAGTTCTTTCGATGCTCCATAACGAGATCACAGATCTTCCAATTCCTAAACAACCTGGATTTAGTGGTAGACAAAATGAGATTCATATAAATACATTTATACAAAGTCATGTTGGAGCAACTTCTTCAGCAGAAATTATCACAGTTACTTCATTTGAAGGTCGATAA 2487 40.89 MKPISNTIPLILLLLCFVLKVSSSIDTIRSTQFLKDPETLLSNRGFFELGFFSPLNSTNRFVGIWDKRVPVPTVFWVANRDKPLNNKSGVFAVSQDGNLVVLDEQNKVLWNSNVSNAAANSTARLLDSGNLVLQDPASGTIIWESFKDPSDKFLPMMKFITNTITKEKIELVSWKSPSNPSSGNFSYGIDPLSAIPEVVIWKNGRPFWRSGPWDGQVFIGIPGMSPDYLQGGSIVIENRTYTLSVTNANETQLFFHYLNSNWALEENQWDTEEQKWEVVWSAPETECGVYGACGAFGVCDSQKTPICSCLKGFRPENEEEWNRGIWRSGCVRNSPLECERKNISVEMGEEDGFLKVGMVKVPDSAAWFVASEEGCRVLCLANCSCSAYAYRTGIGCMIWRGGLIDIEKFKNGGADINVRVAYSDIVDESGGTKDMKAVIIACVVTGTFILICCIYCYCKFGTGKKRSKSQMKIWFNTRDMKNDKMDQVKLQELPLFGFEKLATATDHFHFKNKLGQGGFGPVYKGKLVDGQEIAVKRLSRTSGQGLEEFTNEVMVISKLQHRNLVQLFGCCVEGEERMLVYEYMPNGSLDSIVFDSIKGKILDWQKKFNIIEGIARGLLYLHRDSRLKIIHRDLKASNILLDRDLNPKISDFGTARIFNSNEAQANTTRVVGTYGYMSPEYVMKGQFSEKSDVFSFGVLLLEIISGRKNTNLHHNEHISSLLEFAWKLWIEDNLGPLIDQTMTESHYQIEISRCIHVGLLCVQEFANDRPNIPIVLSMLHNEITDLPIPKQPGFSGRQNEIHINTFIQSHVGATSSAEIITVTSFEGR 828
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 6163475 6166401 + Lag0024828.1 Lac10g0783 583314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac10g0783 828 Pfam D-mannose binding lectin 73 175 IPR001480 -
Lac10g0783 828 CDD B_lectin 31 149 IPR001480 -
Lac10g0783 828 ProSiteProfiles PAN/Apple domain profile. 338 421 IPR003609 -
Lac10g0783 828 SUPERFAMILY Protein kinase-like (PK-like) 486 779 IPR011009 -
Lac10g0783 828 SUPERFAMILY alpha-D-mannose-specific plant lectins 74 180 IPR036426 -
Lac10g0783 828 Gene3D - 20 146 IPR036426 -
Lac10g0783 828 PIRSF SRK 2 828 IPR024171 GO:0004674(InterPro)
Lac10g0783 828 Pfam S-locus glycoprotein domain 208 316 IPR000858 GO:0048544(InterPro)
Lac10g0783 828 SMART blect_4 31 149 IPR001480 -
Lac10g0783 828 Gene3D Transferase(Phosphotransferase) domain 1 584 786 - -
Lac10g0783 828 Pfam PAN-like domain 349 406 IPR003609 -
Lac10g0783 828 Pfam Protein tyrosine and serine/threonine kinase 509 745 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Lac10g0783 828 CDD PAN_AP_plant 335 421 - -
Lac10g0783 828 ProSiteProfiles Bulb-type lectin domain profile. 25 146 IPR001480 -
Lac10g0783 828 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 16 794 - -
Lac10g0783 828 ProSiteProfiles Protein kinase domain profile. 508 783 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac10g0783 828 CDD STKc_IRAK 514 779 - -
Lac10g0783 828 SMART serkin_6 508 783 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac10g0783 828 SMART ntp_6 348 420 IPR003609 -
Lac10g0783 828 Gene3D Phosphorylase Kinase; domain 1 481 583 - -
Lac10g0783 828 ProSitePatterns Serine/Threonine protein kinases active-site signature. 629 641 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Lac10g0783 828 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 21 146 - -
Lac10g0783 828 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 584 787 - -
Lac10g0783 828 FunFam receptor-like serine/threonine-protein kinase SD1-8 479 583 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac10g0781 Lac-Chr10:6152636 Lac10g0783 Lac-Chr10:6163475 0.00E+00 dispersed
Lac10g0783 Lac-Chr10:6163475 Lac10g0791 Lac-Chr10:6215732 9.20E-286 dispersed
Lac10g0783 Lac-Chr10:6163475 Lac10g0784 Lac-Chr10:6170813 3.80E-271 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85655 PF07714 PK_Tyr_Ser-Thr 1.00E-49 CL0016 Lac PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac10g0783 - - - 0.0