Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac10g0787 ATGCAATCGGTGGATTTGGAGATGAAAAGGGAGAAGAAAAGGGAGTGGGAGGCCGCTGTTGAAAGGATGAAGAAGGCGGCGACGGCGGCAATGAAGGGAGGGGGAAGGGGAATCGACGGTGATGTAAAAGACAAGAAAGGAATCGTAATAGCCGTGGTGGTATTGGGAATGTTTATCTTCATCATTGCCATATACTTCGGGTGGTGGAGATGGAAGACTCACAAACGTGCAAAGATAGTGAGGAGCAAGAATATGTCATTATTCAACGAAATAAGGGGACATTTTTTGAACTTGACGATGGGTCAAAGATTTGGTGACAATCTGAACCAAGAGTTATCAACTTATGACTTCGACAAGCTAGAAATTGCGACAAACCATTTTCATTTAGATAACAAGCTTGGAGAAGGTGGATTCGGTCCAGTGTATAAGGGGAGATGGGTGGATGGACAAGAAATAGCTGTGAAAAGACTTTCAAGAGTCTCTCATCAAGGGCTCGAAGAATTTTTAAATGAAGTGACAGTCATTTCAAAACTCCAACATCGAAATCTTGTTCGACTTTTCGGTTGCTGTGTTGAAGGTGAAGAAAAGATGTTGCACTCATCAAAAGTAAGTGTTGTTCATGTAAATTCCTCTAAACAAAAGCTCTTAGATTGGAGAAAAAGGTTCAACATCATAATGGGAATTGCACGAGGTCTGCTTTACCTTCACAAAGATTCTAGATGGAAGATTATCCATAGAGATCTAAAAGCAAGCAATATTCTATTGGACGGAAATTTGAATCCCAAAATTTCAGATTTTGGTATGGCACGAATTTTTCACAATAATGAAGATCAAGCAAATACTATAAGAGTCGTTGGAACTTATGGCTACATGTCTCCGGAATATGCAATGCAAGGTCGATTCTCAGAGAAATCAGACGTATTTAGTTTTGGAGTTCTGTTGCTTGAAATTATTAGTGGGAGAAAAAATACAAGCTTTTGCCAGGATGAAGATGTCTCAAGCCTATTAGGACTGGCTTGGAAATTATGGAAGGAAGAGAATTTAATTTGTTTGATGGATGAAGCAATATATGGCTCGTGCCATCACACAGAGATGCAGAGATGCATCCATATAGGACTCTTGTGCGTTCAAGAAGTCGTAAAGCATAGGCCAGATATGTCGACCATTCTTTCAATGCTTAATAGTGAAATCATAGATCTTTATCCTCCGAAACAGCCTGGGTTTACAAACATTATTCAATTTGAGGGTCATACAAATTTATCTCAGCATAGTTGGGATAAGCGTTCTGTAAATATGGTTACAGTTACCAAGATTGAGGGACGATAG 1326 39.59 MQSVDLEMKREKKREWEAAVERMKKAATAAMKGGGRGIDGDVKDKKGIVIAVVVLGMFIFIIAIYFGWWRWKTHKRAKIVRSKNMSLFNEIRGHFLNLTMGQRFGDNLNQELSTYDFDKLEIATNHFHLDNKLGEGGFGPVYKGRWVDGQEIAVKRLSRVSHQGLEEFLNEVTVISKLQHRNLVRLFGCCVEGEEKMLHSSKVSVVHVNSSKQKLLDWRKRFNIIMGIARGLLYLHKDSRWKIIHRDLKASNILLDGNLNPKISDFGMARIFHNNEDQANTIRVVGTYGYMSPEYAMQGRFSEKSDVFSFGVLLLEIISGRKNTSFCQDEDVSSLLGLAWKLWKEENLICLMDEAIYGSCHHTEMQRCIHIGLLCVQEVVKHRPDMSTILSMLNSEIIDLYPPKQPGFTNIIQFEGHTNLSQHSWDKRSVNMVTVTKIEGR 441
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 6183757 6186273 + Lag0024832.1 Lac10g0787 583318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac10g0787 441 SUPERFAMILY Protein kinase-like (PK-like) 113 424 IPR011009 -
Lac10g0787 441 Coils Coil 6 26 - -
Lac10g0787 441 Pfam Protein tyrosine and serine/threonine kinase 128 392 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Lac10g0787 441 Gene3D Transferase(Phosphotransferase) domain 1 201 399 - -
Lac10g0787 441 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 198 401 - -
Lac10g0787 441 ProSitePatterns Serine/Threonine protein kinases active-site signature. 243 255 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Lac10g0787 441 SMART serkin_6 127 398 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac10g0787 441 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 32 408 - GO:0004674(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)
Lac10g0787 441 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 100 200 - -
Lac10g0787 441 Gene3D Phosphorylase Kinase; domain 1 102 199 - -
Lac10g0787 441 ProSiteProfiles Protein kinase domain profile. 127 420 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac10g0787 Lac-Chr10:6183757 Lac10g0793 Lac-Chr10:6237608 6.10E-135 dispersed
Lac10g0787 Lac-Chr10:6183757 Lac10g0788 Lac-Chr10:6186605 4.80E-124 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85657 PF07714 PK_Tyr_Ser-Thr 2.00E-44 CL0016 Lac PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac10g0787 - - - 0.0