Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac10g0788 ATGAAACTCCAAACGAATTGGAGCTTTTCAGGCAGTCGTCGTCTTCTTCTTCTTCTTCTTCTTCTTTCATTTACATCCTTCTCTTCAAGGTTTGCATTTGGCAGCGATACGATCACATCAACAGATTTCATCAAATACCCTGCAACTATAATTTCCAAAGCCAGTTCCTTTGAGTTGGGGTTCTTCTCTCCTGTTAATTCAACAAGCCAATATGTCGGAATTTGGTACAAGCAAGTTTCCCTACAAACTGTAGTATGGGTTGCCAACAAAGACTGCCCTCTCAACAATAATAATTCTGGGATTTTCACTATTTCCAAGGATGGAAATCTTGTTGTCTTAGATGGAAATGACAATAACAACATTCTTTGGTCTTCAAATGTTTCTTCTTCTTCTTCTACAACCAATACGAGTGCCCGAATTTTAGATTCGGGCAACCTTGTTTTGGAAGATCGAGCTTCCGGATTGGTTTTATGGGAGAGTTTCAAACACCCTTCCCATTTATTCTTGCCTTCCATGAAACTTATCACAAACACAAGAACAAAGGAGAAGCTCGAGTTTACTTCATGGAAAAGCTCTTCCGATCCATCTACAGGTAACTTTTCTTTAGCACTGGATGTTCTGAGTATTCCTGAAGCTGTCATTTCGAATGGCGGTAACCCATATTGGAGATCTGGTCCATGGAATGGTCAGACTTTCATTGGAGTACCCGAAATGATTTCCGTTTATCTCATTGGATTCAATCTTGCAATTGAAGACCAAACTTATTATTTCTCTATTGCTTATAACAACGACGATGAATTACTTTATACAATGCTATTAAGCCCACAAGGGAATCTAGAGCAAGAGTATTGGGATATTTCGCAACAACGTTGGGTGGTGACTTGGTCGGCTCTTAAAACGCCGTGCGATTACTATGGTGCTTGTGGGGCGTTCGGGATGTGTAATGCAAATTCATCCCCAATTTGCAAATGCTTAAAAGGGTTTAAACCAAAGAATGAAGAGGAGTGGAATCGAGGGAATTGGAGTGATGGATGTGTGAGAAATACGCCATTGTATTGTGACAAGTCCAAGTCCAACAACGCCGCCAGTGCTAAGGAAAAAGATGGATTTTTTAAAATGGAATTGGTTAAAGTTCCATTTTTGGCAGAGTGGTCGAACTCCTCTACATCGGCGGATGATTGCGAACACGAGTGCTTGGAGAGTTGCTTGTGTAGTGCTTATGCATATGAAAATGGTATTGGTTGCGTGCTATGGAGGAGGGACTTAATTGATATACAAAAGTTTGAGAGCATTGGAGCCAATGTTTATCTTCGACTGGCATATGCAGACTTAGACACAAGAATTATTATAGCCATAGTGCTACCAGCAACGCTTATCATCTTCATTGTTGCCATATGCTTCTGGTGCAGATCAAAGGCTCACAAAAAAGAGGAGTATAGCCAAAAAGGAAAAGGTTTGAAGTTAAGAAGGGATAACATGATTGGGGACAAAATTAAATTTGAAGAACTACCTCTTTATGATTTTAAGAAGCTGGCAATCGCAACAAATAATTTTGATTCACGAAACAAACTTGGACAAGGTGGCTTTGGTCCCGTATATAAGGGAGGATTGTTAGATGGACAAGAAATAGCAATAAAGAGGCTTTCAAGAGCTTCTAATCAAGGGTATGAAGAATTTATAAATGAAGTGGTCGTGATTTCGAAGCTCCAACATAGAAATCTTGTGCAGCTTCTTGGTTGCTGCATTGAAAGAGAAGAGAAGATGCTAATATACGAGTATATGCCCAACCTAAGCTTGGATATATTCATCTTTGACTCTATCAAACAGAAACTGTTGGATTGGAGAAAAAGATTTAATATTATTGATGGAATTGCTCGAGGTCTCCTTTACCTTCATAGAGATTCAAGATTGAGAATCATCCATAGAGATTTGAAGGCGAACAATATTCTATTAGACAAAGATATGAATCCTAAAATCTCAGACTTTGGTATGGCAAGAATTTTTGGTGGTAATGAAGTGCAAGCCAATACTTTAAGGGTTGTTGGAACTTATGGATATATGTCACCTGAATATGCAATGCAAGGTCAATTTTCAGAGAAATCAGATGTCTTTAGTTTTGGAGTTTTATTACTTGAGATTATAAGTGGGAGAAGAAACACGGGATTCCATCACCATGAACATGCTTTAAGCTTATTGGAATTTGCATGGAAGTTGTGGATGGAAGACAATCTTATTGCCTTGATTGATGAAACAATGTATGAATTGTGTTATCAATCAGATATTTTCAGGTGCATCCAGGTGGGACTCTTATGTGTTGAAGAATCTATAAATGATAGGCCAAATGTTCATACCATCATTTCAATGCTCAATAGTGAAATTGTAGAACTTCCTATTCCAAAGCAACCTAGCTTTATTGTATTACTTGAATCGAGTATTCAGCGAGCGAGAGCCATGAAACCGGAAAAGTCATGGAGCTTTTCAGGTCGTCTTCTTCTCGTTCTTGTTTCATTTACATACTTGTATTCAACAAGATTTTGCTTCGGCAGCGATACGATCACATCAACAAATTTCATCAAAGACCCAGCAACCATAATTTCCAATGCCAGTTCCTTCGAGTTGGGGTTCTTCACACCTGCTAATTCCACAAGCCGATACGTTGGAATTTGGTTCGAGCAAGTGCCCTTGAAAACTCTAGTGTGGGTTGCCAACAAAGACAGACCTCTCAACAACACTCGTGGGATTTTCACTATTTCCGCCAATGATGGGAATCTTGTGGTTTTAGATGGAAACAACAATAACATCACTCTTTGGTCTTCAAATGTTTCTTCTTCTTCTTCTTCAACCAACAGAAGAGCCTATATTTTAGATTCGGGCAACCTTGTGTTGGAAGACACTGCTTCCGGTAGGATTATATGGGAGAGTTTCAAACATCCTTCTGACAAGTTATGGACTTCCTTGAAACTGATAACAAATTTAAGAACCAAAGAGAAAGTGGGGCTTACCTCATGGAACAACCCTTCTGATCCATCTACGGGTAACTTTTCCTTAACGTTGGAAGTTCAGGATATTCCTGAAGTTATGGTATGGAATGACCTTAACCCACATTGGAGGTCTGGTCCTTGGAATGGTCAAACTTTTATCGGCATACGTCAAAGATTTTCCAGTTTTCTCTTTGGATCTAACTTTGTAATTGAAGACCAAACTTACTCTCTCTCTCTCACTTTTTATAATAATTATGACGTCCAACAACAAGTTTCTTACCTAGCTTTAACCTCACAAGGGAATGTGGAGCGAAGGGATTGGGATTCTGCAGGAGAGCAATGGAAGTTTATATGGTCGCCTGTGCAAACGCAGTGTGATTCCTATGGTGTTTGTGGAAGCTTTGGGATTTGTGATGTGGAGGCGTCTCCAATTTGCAGATGTATAAAAGGGTTTAAGCCAAAGCAGGAAGAGGAGTGGAATCGAGGAATATGGAGTGGTGGGTGTGTGAGAAATACGCCATTGAAGTGTGAGAATCCGAGCAATAATAATAACGCCAGCATTCAGGATGAAGATGGGTTTTTAAAAATGGAAATGGTTAAAGTGCCAGCTTTTGCAAAGAGGTTCGATTCCTCTACTTCAGCAGATGATTGCAGACGTGAGTGCTTGAAGAATTGCTCGTCGTGTACTGCTTATGCATTTGAACAGGGTATTGGCTGCATGCTATGGAGTAGAGACTTGGTTGATATACAAAAGTTCATCAGCGGTGGAGCTAATATTTATCTTCCAATCGCATATGCAGACTTAGATCATTCAAATGAATCTACAAAAGACAAGAAAGGAGTTATTATAGCCATAGTGCTACCCGTAACGCTAATTACCATCTTCATCATTGCTATATCCTTCTGGCGAAAATGGAAGACCAGTAAGAAAGACAAGAGAAATATGACTTTTAGCAGAAAGAACATTTTGAAATTGAAAAGGAATGATATGATTGGAGATGAGATTGAATTGGAGGAGCTACCTCTGTATGATTTTGAGGAGGTAGCAATGGCAACAAACAACTTTGATTTAAGCAACAAGCTTGGCCAGGGGGGCTTTGGTCTAGTATACAAGGGAAAACTGTTAAATGGACAAGACATTGCAGTAAAGAGGCTTTCAAAAGCCTCTCACCAAGGGTATGAAGAATTTATAAATGAAGTCAAGGTGATTACAAAACTACAACATCGGAATCTTGTACGGCTTTTTGGATGTAGCATTGAAGGAGAAGAGAAGATGCTCATATATGAATATATGCCCAACTCAAGTTTGGATTCATTAATCTTTGATTCCTCCAAGCAAAAACATCTAGATTGGAGGAAAAGATTTAATATCATTGATGGAATTGCTCGAGGTCTCCTTTACCTTCACCGAGATTCAAGATTGAGAATCATTCATAGAGATCTAAAGGCGAGTAATATTCTTTTAGACAAAGATTTGAATCCTAAAATTTCGGACTTTGGTATGGCAAGAATTTTTTATGGTGATGAAGTTCAAGCAAATACTTTAAGGATTGTTGGAACTTAG 4545 38.99 MKLQTNWSFSGSRRLLLLLLLLSFTSFSSRFAFGSDTITSTDFIKYPATIISKASSFELGFFSPVNSTSQYVGIWYKQVSLQTVVWVANKDCPLNNNNSGIFTISKDGNLVVLDGNDNNNILWSSNVSSSSSTTNTSARILDSGNLVLEDRASGLVLWESFKHPSHLFLPSMKLITNTRTKEKLEFTSWKSSSDPSTGNFSLALDVLSIPEAVISNGGNPYWRSGPWNGQTFIGVPEMISVYLIGFNLAIEDQTYYFSIAYNNDDELLYTMLLSPQGNLEQEYWDISQQRWVVTWSALKTPCDYYGACGAFGMCNANSSPICKCLKGFKPKNEEEWNRGNWSDGCVRNTPLYCDKSKSNNAASAKEKDGFFKMELVKVPFLAEWSNSSTSADDCEHECLESCLCSAYAYENGIGCVLWRRDLIDIQKFESIGANVYLRLAYADLDTRIIIAIVLPATLIIFIVAICFWCRSKAHKKEEYSQKGKGLKLRRDNMIGDKIKFEELPLYDFKKLAIATNNFDSRNKLGQGGFGPVYKGGLLDGQEIAIKRLSRASNQGYEEFINEVVVISKLQHRNLVQLLGCCIEREEKMLIYEYMPNLSLDIFIFDSIKQKLLDWRKRFNIIDGIARGLLYLHRDSRLRIIHRDLKANNILLDKDMNPKISDFGMARIFGGNEVQANTLRVVGTYGYMSPEYAMQGQFSEKSDVFSFGVLLLEIISGRRNTGFHHHEHALSLLEFAWKLWMEDNLIALIDETMYELCYQSDIFRCIQVGLLCVEESINDRPNVHTIISMLNSEIVELPIPKQPSFIVLLESSIQRARAMKPEKSWSFSGRLLLVLVSFTYLYSTRFCFGSDTITSTNFIKDPATIISNASSFELGFFTPANSTSRYVGIWFEQVPLKTLVWVANKDRPLNNTRGIFTISANDGNLVVLDGNNNNITLWSSNVSSSSSSTNRRAYILDSGNLVLEDTASGRIIWESFKHPSDKLWTSLKLITNLRTKEKVGLTSWNNPSDPSTGNFSLTLEVQDIPEVMVWNDLNPHWRSGPWNGQTFIGIRQRFSSFLFGSNFVIEDQTYSLSLTFYNNYDVQQQVSYLALTSQGNVERRDWDSAGEQWKFIWSPVQTQCDSYGVCGSFGICDVEASPICRCIKGFKPKQEEEWNRGIWSGGCVRNTPLKCENPSNNNNASIQDEDGFLKMEMVKVPAFAKRFDSSTSADDCRRECLKNCSSCTAYAFEQGIGCMLWSRDLVDIQKFISGGANIYLPIAYADLDHSNESTKDKKGVIIAIVLPVTLITIFIIAISFWRKWKTSKKDKRNMTFSRKNILKLKRNDMIGDEIELEELPLYDFEEVAMATNNFDLSNKLGQGGFGLVYKGKLLNGQDIAVKRLSKASHQGYEEFINEVKVITKLQHRNLVRLFGCSIEGEEKMLIYEYMPNSSLDSLIFDSSKQKHLDWRKRFNIIDGIARGLLYLHRDSRLRIIHRDLKASNILLDKDLNPKISDFGMARIFYGDEVQANTLRIVGT 1514
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 6186605 6194827 + Lag0024833.1 Lac10g0788 583319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac10g0788 1514 CDD PAN_AP_plant 349 440 - -
Lac10g0788 1514 CDD PAN_AP_plant 1166 1255 - -
Lac10g0788 1514 ProSiteProfiles Protein kinase domain profile. 1349 1514 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac10g0788 1514 Pfam Protein tyrosine and serine/threonine kinase 521 784 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Lac10g0788 1514 Pfam Protein tyrosine and serine/threonine kinase 1351 1504 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Lac10g0788 1514 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 486 593 - -
Lac10g0788 1514 Pfam D-mannose binding lectin 83 190 IPR001480 -
Lac10g0788 1514 Pfam D-mannose binding lectin 897 1003 IPR001480 -
Lac10g0788 1514 ProSiteProfiles PAN/Apple domain profile. 353 440 IPR003609 -
Lac10g0788 1514 ProSitePatterns Serine/Threonine protein kinases active-site signature. 639 651 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Lac10g0788 1514 ProSiteProfiles Protein kinase domain profile. 518 794 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac10g0788 1514 ProSitePatterns Protein kinases ATP-binding region signature. 1355 1377 IPR017441 GO:0005524(InterPro)
Lac10g0788 1514 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 845 975 - -
Lac10g0788 1514 ProSiteProfiles PAN/Apple domain profile. 1170 1258 IPR003609 -
Lac10g0788 1514 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1470 1482 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Lac10g0788 1514 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 24 803 - -
Lac10g0788 1514 Pfam PAN-like domain 365 425 IPR003609 -
Lac10g0788 1514 Pfam PAN-like domain 1183 1243 IPR003609 -
Lac10g0788 1514 SMART serkin_6 518 794 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac10g0788 1514 SMART blect_4 855 978 IPR001480 -
Lac10g0788 1514 SMART blect_4 41 164 IPR001480 -
Lac10g0788 1514 SUPERFAMILY alpha-D-mannose-specific plant lectins 897 1043 IPR036426 -
Lac10g0788 1514 Gene3D Phosphorylase Kinase; domain 1 1326 1424 - -
Lac10g0788 1514 SMART ntp_6 365 439 IPR003609 -
Lac10g0788 1514 SMART ntp_6 1182 1257 IPR003609 -
Lac10g0788 1514 SUPERFAMILY Protein kinase-like (PK-like) 503 815 IPR011009 -
Lac10g0788 1514 CDD B_lectin 855 978 IPR001480 -
Lac10g0788 1514 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 1313 1424 - -
Lac10g0788 1514 ProSiteProfiles Bulb-type lectin domain profile. 35 161 IPR001480 -
Lac10g0788 1514 Pfam S-locus glycoprotein domain 222 332 IPR000858 GO:0048544(InterPro)
Lac10g0788 1514 Pfam S-locus glycoprotein domain 1036 1148 IPR000858 GO:0048544(InterPro)
Lac10g0788 1514 SUPERFAMILY alpha-D-mannose-specific plant lectins 70 228 IPR036426 -
Lac10g0788 1514 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 31 161 - -
Lac10g0788 1514 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 1425 1514 - -
Lac10g0788 1514 CDD B_lectin 49 164 IPR001480 -
Lac10g0788 1514 ProSiteProfiles Bulb-type lectin domain profile. 849 975 IPR001480 -
Lac10g0788 1514 Gene3D Phosphorylase Kinase; domain 1 481 593 - -
Lac10g0788 1514 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 594 797 - -
Lac10g0788 1514 Gene3D - 846 976 IPR036426 -
Lac10g0788 1514 Gene3D - 31 162 IPR036426 -
Lac10g0788 1514 SUPERFAMILY Protein kinase-like (PK-like) 1329 1514 IPR011009 -
Lac10g0788 1514 CDD STKc_IRAK 524 790 - -
Lac10g0788 1514 Gene3D Transferase(Phosphotransferase) domain 1 1425 1514 - -
Lac10g0788 1514 Gene3D Transferase(Phosphotransferase) domain 1 594 796 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac10g0788 Lac-Chr10:6186605 Lac10g0791 Lac-Chr10:6215732 0.00E+00 dispersed
Lac13g0788 Lac-Chr13:6245142 Lac10g0788 Lac-Chr10:6186605 1.40E-26 dispersed
Lac10g0787 Lac-Chr10:6183757 Lac10g0788 Lac-Chr10:6186605 4.80E-124 tandem
Lac10g0788 Lac-Chr10:6186605 Lac10g0789 Lac-Chr10:6199343 7.30E-289 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85658 PF07714 PK_Tyr_Ser-Thr 4.30E-46 CL0016 Lac PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac10g0788 - - - 0.0