Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac10g0791 ATGAAACCCGGAATGCATCGGAGTTTCTCTTGTGATTTTCTTCTTCTTCTTCTTCTTTCATTTTCATGTTTCTGTTCAAGATTTTGCTTCGGCAGCAGCAGAGATACAATCACATCAACAAATTTCATTAAAGACCCTGCAACCATCATTTCTAATGCCAGCTCCTTCGAGTTGGGGTTCTTCACACCAGCTAACTCTACGAACCGATATGTCGGAATTTGGTTCCACAACCAAATATCTCCACAAACTGTTATATGGGTAGCCAACAGAGACAATCCTCTCAAAGATACTTCCGGGATCCTCACAGTCTCCAAAGATGGTAATCTTGTCGTCTTGGATGGAAACGACACTGTCGTTTGGTCTTCAAATGTTTCTTCTTCTGCAGCCAACATAAGCGCCCGAATTTTAGATTCAGGTAACCTTGTTTTGGAAGACACTGCTTCCAAGATGGTTATATGGGAGAGTTTCAAACACCCTTCTGATAAATTTTTGACTTCTATGAAATTAATGTCAAACGCAAAAACCAAAGAGAAAGTGGAGCTTACCTCATGGAACAACCCTTCTGATCCATCTAAGGGAAACTTCTCTGCGGGGCTGAATGTTCTTCACAATATTCCCGAAGCTGTTATTTGGAATGGACAGAACACGTATTGGCGATCTGGGCCATGGAATGGTCAGAGTTTTATCGGAATATACGACATGGTTTCTTTTTATCTCTCTGGATATAACCTCGTAATTGAAGGTCAAATTTACTATTTGTCGGTCACTTATAATGAGGCTGAACAATTTGGTTACTTATTTTTAAGCTCACAAGGGAATCTGCAAGAAACGTACTTGGATGTTGAGGAGAAGCGCTGGGTGGCTGGTTGGGTGGCTTTACAAACGCAGTGTGATTACTATGGTACTTGTGGGGCATTTGGGATCTGTAATGCAAAAGCAACACCTGTTTGCAGCTGTTTAAAAGGGTTTAAGCCGAAGCATGAAGATGAATGGAATCAAGGAAATTGGAGGGGTGGATGCGTGAGAAAGAAGCCCTTGCACTGTGAGAAGTTGAACAACACTGGCAGCACTGAGGAAGATGGATTTTTTAAAGTTGAAATGGTTAAAGTTCCATTTTTTGCAGAATGGGTTGATTCCTTTGCTTCAATAGATGATTGTAGAGTCAAGTGCTTGGAGAATTGTTCGTGCAGTGCTTATGCATATGACAGTGGTATTGGTTGTATGCTCTGGAGTGGAGATTTAATTGATATACAGAAGTTTGAGAGCGGTGCAACTGATCTGTACCTTCGAATGGCATTTGCAGACTTGGATCATACGAATGTAAGAGACAAAAAGGGAATTATTTTAGGCATTGTGCTACCAGTCATTTTTATCATCTTCATGGTTGTCACATATTTTTGGTGCAGATGGAAGACTCGCAAACAAGCAGAGAAAAACAGATCAACTCTGACTTCTAGCGAAAAGGAAACGATTTTAAAGTTGAGAAAGGAAGACTTGATTGAAGATGAAGTTAAATTGGAGGAGCTCCCTCTTTATGATTTTGAGAAGTTAGCAATTGCAACAGACAACTTTGATTTAAGCAACAAGTTAGGACAGGGTGGCTTTGGTCCAGTATATAAAGGAAAATTGTTAAATGGACAGGAAATAGCAGTGAAGAGGCTTTCAAGAGTCTCTCATCAAGGGTACGAAGAATTTATAAATGAAGTGAGGGTCATTTCAAAGCTACAACATAGGAATCTTGTGCAGCTTCTTGGTTGTTGCGTTGAAGGAGATGAGAAGATGTTAATATATGAATACATGCCAAATCTAAGTTTGGATGCATTAATCTTCGGCTCCCCCAAGCAAAAACTAATTTTGGATTGGCGGAAAAGATACAATATCATTGATGGAATAGCTCGAGGTCTCCTTTACCTCCATCGAGATTCGAGATTGAAAATCATTCATAGAGATTTAAAGGCAAGTAATATTCTATTAGACAAAGATTTGAATCCTAAAATCTCCGATTTTGGCATGGCAAGGATTTTTTGTGGTAATGAAGTTCAAGCAAACACTTTAAGAGTTGTTGGGACTTATGGGTATATGTCTCCTGAATATGCCATGCAAGGTCAATTTTCAGAAAAATCTGACGTGTTCAGCTTCGGAGTTCTATTGCTTGAAATTATAAGTGGGAAACGAAATACGGGGTTCTACCTCCACAAACACGCCTTAAGTTTATTGGAATTTGCCTGGAAGTTATGGGTGGAAGACAATCTTATTCCTTTGATTGAACCAACAATATACGAATTGTGCTACCAATTAGAGATTTCGAGATGCATCCATGTAGGGCTCTTATGCATTCAAGAATATATAGATGATCGGCCAAATGTCTCTACCATTATCTCAATGATCAATAGTGAAATTGTAGATCTTCCTTCTCCAAAGCAACCCGGCTTTCTTAGCCGACCACTAGAAAGTAATAACACAGCATCATCCGAACAAAATTTAGATAAGTATTCTCAAAATAATCTTACACTTACCACGATTATACCTCGATAG 2535 39.25 MKPGMHRSFSCDFLLLLLLSFSCFCSRFCFGSSRDTITSTNFIKDPATIISNASSFELGFFTPANSTNRYVGIWFHNQISPQTVIWVANRDNPLKDTSGILTVSKDGNLVVLDGNDTVVWSSNVSSSAANISARILDSGNLVLEDTASKMVIWESFKHPSDKFLTSMKLMSNAKTKEKVELTSWNNPSDPSKGNFSAGLNVLHNIPEAVIWNGQNTYWRSGPWNGQSFIGIYDMVSFYLSGYNLVIEGQIYYLSVTYNEAEQFGYLFLSSQGNLQETYLDVEEKRWVAGWVALQTQCDYYGTCGAFGICNAKATPVCSCLKGFKPKHEDEWNQGNWRGGCVRKKPLHCEKLNNTGSTEEDGFFKVEMVKVPFFAEWVDSFASIDDCRVKCLENCSCSAYAYDSGIGCMLWSGDLIDIQKFESGATDLYLRMAFADLDHTNVRDKKGIILGIVLPVIFIIFMVVTYFWCRWKTRKQAEKNRSTLTSSEKETILKLRKEDLIEDEVKLEELPLYDFEKLAIATDNFDLSNKLGQGGFGPVYKGKLLNGQEIAVKRLSRVSHQGYEEFINEVRVISKLQHRNLVQLLGCCVEGDEKMLIYEYMPNLSLDALIFGSPKQKLILDWRKRYNIIDGIARGLLYLHRDSRLKIIHRDLKASNILLDKDLNPKISDFGMARIFCGNEVQANTLRVVGTYGYMSPEYAMQGQFSEKSDVFSFGVLLLEIISGKRNTGFYLHKHALSLLEFAWKLWVEDNLIPLIEPTIYELCYQLEISRCIHVGLLCIQEYIDDRPNVSTIISMINSEIVDLPSPKQPGFLSRPLESNNTASSEQNLDKYSQNNLTLTTIIPR 844
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 6215732 6219009 + Lag0024836.1 Lac10g0791 583322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac10g0791 844 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 22 810 - -
Lac10g0791 844 Gene3D Phosphorylase Kinase; domain 1 483 599 - -
Lac10g0791 844 SUPERFAMILY alpha-D-mannose-specific plant lectins 83 225 IPR036426 -
Lac10g0791 844 Gene3D Transferase(Phosphotransferase) domain 1 600 803 - -
Lac10g0791 844 ProSiteProfiles PAN/Apple domain profile. 348 432 IPR003609 -
Lac10g0791 844 ProSitePatterns Serine/Threonine protein kinases active-site signature. 646 658 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Lac10g0791 844 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 600 804 - -
Lac10g0791 844 ProSiteProfiles Protein kinase domain profile. 524 801 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac10g0791 844 Pfam D-mannose binding lectin 83 184 IPR001480 -
Lac10g0791 844 SUPERFAMILY Protein kinase-like (PK-like) 507 795 IPR011009 -
Lac10g0791 844 CDD B_lectin 40 159 IPR001480 -
Lac10g0791 844 ProSiteProfiles Bulb-type lectin domain profile. 34 156 IPR001480 -
Lac10g0791 844 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 23 - -
Lac10g0791 844 SMART ntp_6 357 431 IPR003609 -
Lac10g0791 844 FunFam receptor-like serine/threonine-protein kinase SD1-8 496 599 - -
Lac10g0791 844 CDD STKc_IRAK 530 797 - -
Lac10g0791 844 Pfam Protein tyrosine and serine/threonine kinase 526 726 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Lac10g0791 844 SMART serkin_6 524 801 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac10g0791 844 CDD PAN_AP_plant 345 432 - -
Lac10g0791 844 Pfam S-locus glycoprotein domain 218 326 IPR000858 GO:0048544(InterPro)
Lac10g0791 844 PIRSF SRK 6 844 IPR024171 GO:0004674(InterPro)
Lac10g0791 844 SMART blect_4 40 159 IPR001480 -
Lac10g0791 844 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 30 156 - -
Lac10g0791 844 SUPERFAMILY Hairpin loop containing domain-like 362 419 - -
Lac10g0791 844 Pfam PAN-like domain 357 417 IPR003609 -
Lac10g0791 844 Gene3D - 30 157 IPR036426 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac10g0783 Lac-Chr10:6163475 Lac10g0791 Lac-Chr10:6215732 9.20E-286 dispersed
Lac10g0788 Lac-Chr10:6186605 Lac10g0791 Lac-Chr10:6215732 0.00E+00 dispersed
Lac10g0789 Lac-Chr10:6199343 Lac10g0791 Lac-Chr10:6215732 2.0e-312 dispersed
Lac10g0791 Lac-Chr10:6215732 Lac10g0793 Lac-Chr10:6237608 0.00E+00 dispersed
Lac10g0790 Lac-Chr10:6207560 Lac10g0791 Lac-Chr10:6215732 0.00E+00 tandem
Lac10g0791 Lac-Chr10:6215732 Lac10g0792 Lac-Chr10:6222306 0.00E+00 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85661 PF07714 PK_Tyr_Ser-Thr 9.60E-46 CL0016 Lac PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac10g0791 - - - 0.0