Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac10g0875 ATGGCCCCTTTCAAGGACGTCCTCCCCGGTCACGGCTTCGTTTTCATCTTTGTTCCGACCACCGGAATCAACGGAACTACCGACGCTCAGAATTTGGGCTTTTTGAACTTCACGCTCAATGGGAACCCCAACAACCATGCGTTCGGAATCGAGTTCGATGTGTTTGCCAATGAAGAATTCAACGACCCCAACGACAATCATGTCGGAATCGACTTGAATTCCTTGACCTCTAACTTCACCGGAGATGCTGGGTTTTGGTCCGACGGCGGCTCGTTCAATAGGTTCAGGCTTAACAGCGGCGAAAATTACCAAGTCTGGATTGACTATTCCGATTTTCAGATGAACGTTACGATGGCTCCGGCGGGGATGGAAAGGCCACGGCGGCCGTTGATTAGTGTCTCTCTGAATCTCTCTGAAATTTTCTTGGACGAAATGTACGTGGGGTTCACGAGCGCCACAGGGCGGTTAATTCAAGGCCACAATATTTTAGCCTGGAGTTTTAGCAACTCCAATTTTTCATTGAGCGAGGGTTTAATTACCACTGGATTGCCCTCCTTCGTCCTCCCAAAAGACCCATTTACCAAATCGAAATGGTTCATCGCCGGAGTGACAGTCGGCGGATTCCTCGTCGTTTGTTTCGTCGCTGCGATTTTGGGGATTCTGATCGCCGACCACCGGAAGAGAGCGAGGGCGAGAGCGGAAATGGAGGATTGGGAATTGGAGTACTGGCCACATCGAATCACATATCAAGAAATCGAATCGGCGACGAAGGGGTTTGCAGAAGAAAACGTCATCGGAATCGGAGGGAACGGGAAAGTTCATAAAGGGGTTTTGGCCGGAGGAGGTTCAGAAGTTGCAGTGAAGCGAATTTCTCACGAGAACGACGGCATGCGAGAGTTCATAGCTGAAATTTCAAGCATAGGGAGATTGAAGCACAGAAATCTCGTCAGTTTGAGAGGTTGGTGTAAGAAAGAGAAGGGAAATTTCTTGCTGGTGTACGATTACATGGAAAATGGAAGTTTAGACAAATGGATATTCGATTGCGATGAGAGAAACATGATGAGCTGCGAGGATCGAATCAGAATATTGAAAAACGTAGCCTCAGGGGTGTTGTATCTACACGAGGGATGGGAATCGACGGTCCTTCATAGGGACATAAAAGCCAGCAATGTGTTGCTGGACAAGGACATGAATGGAAGGCTGGGAGATTTCGGGTTGGCTCGAGTCCACGGCCACGGTCAAGTGGCTAGCACGACGAGAGTCGTCGGCACGATGGGCTACATCGCACCCGAGTTGATACGGACCGGACGAGCTTCGGCTCAATCCGATGTGTTTGGTTTTGGAGTTCTGATTTTGGAAGTGATGTGTGGGAGGAGGCCAATAGAGGAAGGGAAGCCGCCGTTGGTGGATTGGGTTCGACGGTTGGTCGTTGAAGGGGAGTTGAATGCAGCGCTCGACGAGAGGGTGAGGAAGAAGGGCGGGTGGAGCGAGGGGGAAGTCGAGAGAGTGATGCATTTGGGGTTGTTGTGTGCGCATCCTGACCCGAACACTCGGCCGACGATGAGACAAGTTGTGAAAGTGTTGGAAGGGAAGATTGAGTTGGATGAGAGTGAGAGTGAGAGTATGAATGCTTATTTGCTTCAAAGATTGAAGTCACAAGAAATGTGGTCTGATTCTACGGTTGGTTTTGGGCATAAATTACATCCAACTTTTGAGGATTTTCTTCAATCTTCTTCAACTTCCCTCTCTTGGTCTACTTCCATTGTCACAGGCAGGTGA 1779 49.41 MAPFKDVLPGHGFVFIFVPTTGINGTTDAQNLGFLNFTLNGNPNNHAFGIEFDVFANEEFNDPNDNHVGIDLNSLTSNFTGDAGFWSDGGSFNRFRLNSGENYQVWIDYSDFQMNVTMAPAGMERPRRPLISVSLNLSEIFLDEMYVGFTSATGRLIQGHNILAWSFSNSNFSLSEGLITTGLPSFVLPKDPFTKSKWFIAGVTVGGFLVVCFVAAILGILIADHRKRARARAEMEDWELEYWPHRITYQEIESATKGFAEENVIGIGGNGKVHKGVLAGGGSEVAVKRISHENDGMREFIAEISSIGRLKHRNLVSLRGWCKKEKGNFLLVYDYMENGSLDKWIFDCDERNMMSCEDRIRILKNVASGVLYLHEGWESTVLHRDIKASNVLLDKDMNGRLGDFGLARVHGHGQVASTTRVVGTMGYIAPELIRTGRASAQSDVFGFGVLILEVMCGRRPIEEGKPPLVDWVRRLVVEGELNAALDERVRKKGGWSEGEVERVMHLGLLCAHPDPNTRPTMRQVVKVLEGKIELDESESESMNAYLLQRLKSQEMWSDSTVGFGHKLHPTFEDFLQSSSTSLSWSTSIVTGR 592
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 7011693 7013471 + Lag0024920.1 Lac10g0875 583406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac10g0875 592 Gene3D Phosphorylase Kinase; domain 1 221 335 - -
Lac10g0875 592 PANTHER - 9 535 IPR050528 GO:0005886(PANTHER)
Lac10g0875 592 FunFam L-type lectin-domain containing receptor kinase S.4 336 541 - -
Lac10g0875 592 Gene3D - 2 176 - -
Lac10g0875 592 Pfam Legume lectin domain 9 171 IPR001220 GO:0030246(InterPro)
Lac10g0875 592 FunFam Putative L-type lectin-domain containing receptor kinase VII.2 221 335 - -
Lac10g0875 592 ProSitePatterns Protein kinases ATP-binding region signature. 265 288 IPR017441 GO:0005524(InterPro)
Lac10g0875 592 ProSiteProfiles Protein kinase domain profile. 259 546 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac10g0875 592 SUPERFAMILY Protein kinase-like (PK-like) 237 529 IPR011009 -
Lac10g0875 592 CDD lectin_legume_LecRK_Arcelin_ConA 1 165 IPR001220 GO:0030246(InterPro)
Lac10g0875 592 CDD STKc_IRAK 265 530 - -
Lac10g0875 592 SUPERFAMILY Concanavalin A-like lectins/glucanases 45 324 IPR013320 -
Lac10g0875 592 Gene3D Transferase(Phosphotransferase) domain 1 336 552 - -
Lac10g0875 592 ProSitePatterns Serine/Threonine protein kinases active-site signature. 381 393 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Lac10g0875 592 SMART serkin_6 259 528 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac10g0875 592 Pfam Protein kinase domain 260 526 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac10g0875 Lac-Chr10:7011693 Lac3g0147 Lac-Chr3:1017958 4.80E-127 dispersed
Lac10g0875 Lac-Chr10:7011693 Lac12g0721 Lac-Chr12:7505932 3.00E-190 wgd
Lac10g0875 Lac-Chr10:7011693 Lac9g2257 Lac-Chr9:41932067 1.70E-55 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85665 PF00069 Pkinase 8.30E-47 CL0016 Lac PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac10g0875 - - - 0.0