Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac10g0924 ATGCCTGCCCCTTCTTCTTCTTCCCCTCTCTCTTTCCTCTGTTTTCTCACTCTGCTTCTCATTTTCCACACACCATCTAAATGTGCTTCTGCTGCTGCTGCAGCACCTAAACAAGCCCCCGCCCGCCGCCACCGCCTGCTCTCCGTCGACTACTACGACAAAACATGCCCTCACCTCGAGCAACTTGTCTCCTCTATCACTACTCAACAGTTCAGAGACGCACCAGTCTCTGCTCCAGCAACACTACGCCTCTTCTTCCATGATTGCTTTGTAGAAGGCTGTGATGGGTCGATTCTGATATCGACGAAGCCTGGCAGCAAAGTGGCGGCGGAGAAGGATGCGGCGGACAACAAGGGGCTGAGAGCGGAAGGGTTTGAAAGCATCAAGAAGGCCAAGGCGTTGGTTGAGAGCAAGTGCCCCGGTGTTGTGTCTTGTGCTGACATCCTCGCAATTGCAGCCAGAGATTTTGTCCATCTGGCAGGAGGGCCGTATTACCCGGTGAAGAAGGGACGATGGGACGGGAAGATATCAATGGCGGCCAGAGTAGGCTCCAATCTACCGCGAGCAAATTCCACCGTCGATCAGCTTCTGAAACTCTTCAATTCCAAAGGACTATCCGCCGATGACCTCGTTGTCCTCTCCGGTGCGCATACGATCGGATTTGCGCACTGCGAGCATTTCACAAACCGTCTGTACGACTACAGAGGCACGAAGCAACCGGATCCGGCGATCGACGGGAGGCTGCTGAAGGAGCTTAAAATGTCGTGCCCTCGCTACGGCGGAAATACGGACATTGTGGCGCCGTTCGATGTAACGACGCCGTTTGTGTTCGATCATGCGTACTACGGGAATTTGGAAGGAAAATTGGGGCTATTGGCTACGGATCAAGCTCTGGTTTCGGATGCGAGAATGAAGACGTTGGTGCAGAGTTTGGCGAAGGATAAGCAGAAGTTTTTTCAAGCTTTCGCGGCGGCGATGGACAAAATGGGATCGATTGGTGTGAAGAGGGGACGAAGACATGGAGAGCGAAGGACGGATTGTAGCATTCATCAGAATTGA 1059 53.16 MPAPSSSSPLSFLCFLTLLLIFHTPSKCASAAAAAPKQAPARRHRLLSVDYYDKTCPHLEQLVSSITTQQFRDAPVSAPATLRLFFHDCFVEGCDGSILISTKPGSKVAAEKDAADNKGLRAEGFESIKKAKALVESKCPGVVSCADILAIAARDFVHLAGGPYYPVKKGRWDGKISMAARVGSNLPRANSTVDQLLKLFNSKGLSADDLVVLSGAHTIGFAHCEHFTNRLYDYRGTKQPDPAIDGRLLKELKMSCPRYGGNTDIVAPFDVTTPFVFDHAYYGNLEGKLGLLATDQALVSDARMKTLVQSLAKDKQKFFQAFAAAMDKMGSIGVKRGRRHGERRTDCSIHQN 352
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 7361218 7363451 - Lag0024969.1 Lac10g0924 583455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac10g0924 352 CDD secretory_peroxidase 47 348 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Lac10g0924 352 ProSiteProfiles Plant heme peroxidase family profile. 46 351 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac10g0924 352 ProSitePatterns Peroxidases active site signature. 78 89 IPR019794 GO:0004601(InterPro)
Lac10g0924 352 Gene3D Peroxidase, domain 2 187 329 - -
Lac10g0924 352 Pfam Peroxidase 65 314 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac10g0924 352 PRINTS Haem peroxidase superfamily signature 78 92 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac10g0924 352 PRINTS Haem peroxidase superfamily signature 209 224 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac10g0924 352 PRINTS Haem peroxidase superfamily signature 161 173 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac10g0924 352 PRINTS Haem peroxidase superfamily signature 143 160 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac10g0924 352 PRINTS Haem peroxidase superfamily signature 270 285 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac10g0924 352 FunFam Peroxidase 187 329 - -
Lac10g0924 352 SUPERFAMILY Heme-dependent peroxidases 47 349 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac10g0924 352 PANTHER - 41 349 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac10g0924 352 Gene3D - 50 349 - -
Lac10g0924 352 ProSitePatterns Peroxidases proximal heme-ligand signature. 209 219 IPR019793 -
Lac10g0924 352 FunFam Peroxidase 50 196 - -
Lac10g0924 352 PRINTS Plant peroxidase signature 123 136 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac10g0924 352 PRINTS Plant peroxidase signature 208 220 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac10g0924 352 PRINTS Plant peroxidase signature 268 283 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac10g0924 352 PRINTS Plant peroxidase signature 56 75 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac10g0924 352 PRINTS Plant peroxidase signature 161 176 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac10g0924 352 PRINTS Plant peroxidase signature 80 100 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac10g0924 352 PRINTS Plant peroxidase signature 324 337 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac10g0924 352 PRINTS Plant peroxidase signature 142 152 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac10g0924 352 PRINTS Plant peroxidase signature 284 301 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac10g0924 Lac-Chr10:7361218 Lac8g2981 Lac-Chr8:46682092 5.30E-73 dispersed
Lac10g0924 Lac-Chr10:7361218 Lac12g0764 Lac-Chr12:7993796 2.20E-50 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac10g0924 K00430 - csv:101216263 639.417