Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac10g1155 ATGACTAATAGTGCTGGAATTCCCGATCCTTTTGGAAAAGTATACTGGAATTTCAATGCATTGGTTGGTCTTTTTTTCCCTGCTGTGACGGGAATAATGGCTGGTTCTAATAGGTCGGCTTCACTGAAGGATACTCAGCGTTCAATTCCTGTTGGAACATTAGCTGCAACTCTTGCAACAACTGCATTGTATGTGGTCTCTGTGCTGCTGTTTGGAGCACTGGCAACCAGACAGAGACTATTGACAGATAGGCTTCTTACTGCTACGGTTGCATGGCCTTTCCCAGCAATTATTTATGTTGGAATTATTTTATCAACCCTCGGAGCTGCTCTTCAGAGCCTGACAGGAGCCCCCCGCTTGCTAGCAGCTATAGCCAATGATGATATATTACCCATTCTGAACTATTTTAAAGTTGCTGATGGCGGTGAGCCATACTTTGCAACCCTGTTTACTGCAGTTCTCTGCATCGGATGTGTCATAATTGGGAATCTTGATCTTATCACACCAACCGTAACCATGTTTTTCCTATTGTGTTATGCTGGTGTGAACTTATCCTGCTTCCTTTTGGATCTACTAGATGCTCCCAGTTGGCGTCCACGATGGAGATTCCATCACTGGAGCCTCTCTCTTCTTGGAGCATCACTTTGTGTTGTGATAATGTTCTTGATCTCGTGGTCATTCACGATAGTGTCTCTAGCCCTTGCAAGCCTTATATATTATTATGTGTGCCTTAGAGGTAAGGCTGGGGACTGGGGTGATGGTTTCAAGAGTGCATATTTCCAACTTGCTCTCCGCAGTCTTCGTTCGCTTGGAGCGAGCCAAGTCCACCCAAAGAATTGGTATCCCATACCCTTGATATTTTGCCGACCATGGGGGAAGCTGCCAGAAAATGTACCCTGTCACCCTAAACTTGCAGACTTTGCAAACTGCATGAAGAAAAAAGGCCGTGGAATGTCCATATTTGTCTCCATACTTGATGGAGATTACCACGAACGGGTTGAAGATTCAAAAGCTGCCTGCAAGCAGCTTGCTACATATATTGATTACAAACGTTGCGAAGGAGTGGCAGAGATTGTTGTGGCTCCCACAATGTCTGAAGGTTTCAGGGGAATTGTTCAGACGATGGGTCTTGGAAATCTCAAGCCGAATATTATAGTCATGCGATACCCAGAAATATGGCGTCGTGAAAATCTAACTGAGATTCCGGCTACTTTTGTTGGAATAATAAATGACTGCATCGATGCTAACAAGGCAGTTGTCATTGTTAAGGGTCTGGATGAATGGCCTAATGAATTTCAGAGGCAGTATGGGACTATAGACTTGTATTGGATTGTGAGGGATGGAGGTCTTATGCTTCTCCTCTCTCAGCTTCTCCTTACAAAGGAGAGCTTTGAAAGCTGTAAGATTCAAGTGTTCTGCATTGCAGAGGAGGAAGCTGACGCCGAGGGCCTCAAAGCTGATGTCAAAAAGTTTTTGTATGATCTTCGGATGCAAGCTGAGGTGATCGTTATAACGGTAAAATCATGGGACACGCAAGGGGAGGGCGGGCAACAAGATGAATCATTGGAAGCGTTCAATGCTGCTCAAGGGAGGATTGCTAGTTATCTAGGTGAAATGAAGGCAGCTGCTGAGAGCAGAGGAACCACACTAATGGCTGATGGGAAGCCTGTGAGCGTGGATGAGAAGCAAGTTGAGAAGTTTCTACATACAACTCTCAAGTTGAACTCAACAATTCTGAGATACTCGAGAATGGCTGCAGTCGTGCTCGTGAGCCTCCCGCCACCTCCTGTCAACCATCCTGGATACTTCTATATGGAATACTTGGATTTGTTGGTTGAGAATGTACCTAGGCTCTTGATCGTAAGAGGATACCGCAGAGACGTCGTAACGCTGTACACGTAG 1902 45.37 MTNSAGIPDPFGKVYWNFNALVGLFFPAVTGIMAGSNRSASLKDTQRSIPVGTLAATLATTALYVVSVLLFGALATRQRLLTDRLLTATVAWPFPAIIYVGIILSTLGAALQSLTGAPRLLAAIANDDILPILNYFKVADGGEPYFATLFTAVLCIGCVIIGNLDLITPTVTMFFLLCYAGVNLSCFLLDLLDAPSWRPRWRFHHWSLSLLGASLCVVIMFLISWSFTIVSLALASLIYYYVCLRGKAGDWGDGFKSAYFQLALRSLRSLGASQVHPKNWYPIPLIFCRPWGKLPENVPCHPKLADFANCMKKKGRGMSIFVSILDGDYHERVEDSKAACKQLATYIDYKRCEGVAEIVVAPTMSEGFRGIVQTMGLGNLKPNIIVMRYPEIWRRENLTEIPATFVGIINDCIDANKAVVIVKGLDEWPNEFQRQYGTIDLYWIVRDGGLMLLLSQLLLTKESFESCKIQVFCIAEEEADAEGLKADVKKFLYDLRMQAEVIVITVKSWDTQGEGGQQDESLEAFNAAQGRIASYLGEMKAAAESRGTTLMADGKPVSVDEKQVEKFLHTTLKLNSTILRYSRMAAVVLVSLPPPPVNHPGYFYMEYLDLLVENVPRLLIVRGYRRDVVTLYT 633
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 9722076 9725863 + Lag0025200.1 Lac10g1155 583686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac10g1155 633 Pfam Amino acid permease 16 261 IPR004841 GO:0016020(InterPro)|GO:0055085(InterPro)
Lac10g1155 633 PANTHER SOLUTE CARRIER FAMILY 12, CATION COTRANSPORTERS 15 633 IPR004842 GO:0006811(InterPro)|GO:0006884(PANTHER)|GO:0015377(InterPro)|GO:0015379(PANTHER)|GO:0016020(InterPro)|GO:0055064(PANTHER)|GO:0055075(PANTHER)|GO:1902476(PANTHER)|GO:1990573(PANTHER)
Lac10g1155 633 Gene3D Amino acid/polyamine transporter I 2 250 - -
Lac10g1155 633 Pfam Solute carrier family 12 432 632 IPR018491 GO:0006811(InterPro)|GO:0016020(InterPro)|GO:0022857(InterPro)
Lac10g1155 633 Pfam Solute carrier family 12 302 423 IPR018491 GO:0006811(InterPro)|GO:0016020(InterPro)|GO:0022857(InterPro)
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac10g1155 K14427 - csv:101216218 1175.23