Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac10g1308 ATGGCATCCTCCTCCACTTCACTTCTCAAGTTCCTCTCCATCTTCTTTTTTCTCATCTGTTTCTTCACAACCCAAGCCGTTTCACAATCTGATGAATGCCAAATAACAACCAACGAATGCACCAACAAAGACAAGGCCTTGCGTCTTAAAATCATTGCCATTTTCTCCATCCTCATTGCGAGTGTCATCGGCGTCTGCTCGCCGCTCGTCACTCGGTCGATCCCGTCGTTGCACCCCGATCGGAACATGTTCATCATCCTCAAAGCCTTCGCCGCTGGCATCATTCTCGCCACCGGTTTCATGCACGTTTTGCCCGATTCTTTCGAGATGCTTTGGTCGAATTGTCTGAAGGAGAATCCGTGGCATAAGTTTCCCTTTTCGGGTTTCGTCGCAATGATGTCCGCGATCGTCACCCTCATGGTGGATTCCATGGCTACTAGTTTGTATACCAAGAAACACACCGAAGTTATGCCTGAGAATTCTCAAGGAGGAGGAGGAGATCTTGAGCTGCCTGTGGTCAGTGGTGGCCATTTTCATGGCCACCATCATCAAGACACAAAAGAAATTAATCCTGGTTCTCAACTATTGCGCTATCGTGTTATTGCCATGGTTTTGGAATTGGGAATTGTGGTTCATTCTGTAGTGATTGGACTTTCACTTGGAGCAACAAATGATACATGCACAATCAAAGGTCTAGTGGCAGCTCTTTGTTTCCATCAAATGTTTGAAGGGATGGGTCTTGGTGGCTGTATTCTTCAGGCTGAATACAAGTGGATGAAGAAGGCAATAATGGCATTCTTCTTCTCAGTGACAACCCCATTTGGGATAGCCCTAGGAATAGGGTTGTCAAGGACATACAAAGAAAACAGTCCAAGTGCCCTAATCACTGTGGGGTTGCTGAATGCTTCTTCAGCTGGCCTTCTCATCTACATGGCTTTGGTGGATCTTCTTTCTGCTGACTTTATGGGGCCAAAGTTGCAAGGCAGCATCAAACTCCAAGTCAAATCCTACATTGCTGTGATCTTGGGAGCTGGTGGCATGTCCTTAATGGCAAAGTGGGCTTGA 1065 46.67 MASSSTSLLKFLSIFFFLICFFTTQAVSQSDECQITTNECTNKDKALRLKIIAIFSILIASVIGVCSPLVTRSIPSLHPDRNMFIILKAFAAGIILATGFMHVLPDSFEMLWSNCLKENPWHKFPFSGFVAMMSAIVTLMVDSMATSLYTKKHTEVMPENSQGGGGDLELPVVSGGHFHGHHHQDTKEINPGSQLLRYRVIAMVLELGIVVHSVVIGLSLGATNDTCTIKGLVAALCFHQMFEGMGLGGCILQAEYKWMKKAIMAFFFSVTTPFGIALGIGLSRTYKENSPSALITVGLLNASSAGLLIYMALVDLLSADFMGPKLQGSIKLQVKSYIAVILGAGGMSLMAKWA 354
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 11712642 11715064 - Lag0025353.1 Lac10g1308 583839
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac10g1308 354 NCBIfam ZIP zinc/iron transport family 36 354 IPR004698 GO:0005385(InterPro)|GO:0016020(InterPro)|GO:0071577(InterPro)
Lac10g1308 354 PANTHER ZINC/IRON TRANSPORTER 43 353 - GO:0005385(PANTHER)|GO:0005886(PANTHER)|GO:0016020(PANTHER)|GO:0071577(PANTHER)
Lac10g1308 354 Pfam ZIP Zinc transporter 48 351 IPR003689 GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro)|GO:0055085(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac10g1308 Lac-Chr10:11712642 Lac1g3344 Lac-Chr1:53117715 5.80E-104 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac10g1308 K14709 - csv:101221552 617.076