Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac10g1317 ATGGCCGCAAAAGATTCAGAGCAAGTCTTGGATGTGCAGTCGGTCGTCGAAGCAGTAGTTACAGACCAAGACGCCGATGTTCCAAGTTATGAAGTAGAAAGCCTCTGCATGCGCTGCGGAGAAAACGGGACAACAAGATTTTTGTTGACTTTAATTCCGCACTTCAGAAAGATCTTGTTATCGGCCTTTGAATGTCCACATTGTGGTGAGAGGAATAATGAAGTCCAGTTTGCTGGTGAGATCCAGCCACGAGGCTGTTGCTACTCATTGGAGGTTCCTGCTGGCGACCAGAAGATGCTCAATCGACAAGTGGTGAAATCTGAATCTGCTATTATTAAGATCCCTGAATTGGACTTTGAGATTCCAGCAGAGGCTCAACGTGGAACTCTATCAACAGTGGAAGGTATATTGGTACGAGCTGTGGATGGATTGGAAGCCCTCCAAGAGGAACGTAGGAAGGTGGATCCTCAGACTGCTGAAGCAATAGACCAGTTTCTCCTAAAACTGAAAGCTTGTGCCGTAGGAGATTCATCTTTCTCCTTCATCTTGGATGATCCAGCTGGAAACAGCTTCATTGAGAACCCATTTGCACCATCCAAGGATCCATCATTAAGTATCAAGTTTTATGAGCGGACTCCAGAACAACAAGCATCGTTAGGTTATTATGTTGAATCATCACAATCAGAAGAAGCCGAGGGCGGAGCATCAACCAGTGGAGTTGATGCTTCTAATCAAGTTAGAGGAGAGGCACATGGATCGGTAGGAGCAGCAGCTGGGCACCGGGCAATAGCTCAGAGTAACAGTGCCGAGATCGCTGAGGCCTTGTTTCGTTACACTGCCCCAGAAGAAGTGATGACTTTCCCATCAACATGTGGAGCATGTGCAGCTAGGTGTGAGACTCGAATGTTTGTAACCGAAATTCCCTACTTCCAAGAAGTGATTGTCATGGCATCTACTTGTGATGCTTGTGGTTACCGTAGTTCTGAGTTGAAGCCTGGTGGGCGAATCCCGGAAAAAGGAAAGATAATTAGTCTTTGTGTGAAGGATGTTAGAGATCTCAGTCGAGATGTGATAAAGTCAGATACTGCAAGTGTGAGAGTCCCAGATCTTGACTTGGAGCTGACCAGTGGCACTCTTGGGGAATTGTTACAACGGTTGAAGGTTTAA 1167 46.36 MAAKDSEQVLDVQSVVEAVVTDQDADVPSYEVESLCMRCGENGTTRFLLTLIPHFRKILLSAFECPHCGERNNEVQFAGEIQPRGCCYSLEVPAGDQKMLNRQVVKSESAIIKIPELDFEIPAEAQRGTLSTVEGILVRAVDGLEALQEERRKVDPQTAEAIDQFLLKLKACAVGDSSFSFILDDPAGNSFIENPFAPSKDPSLSIKFYERTPEQQASLGYYVESSQSEEAEGGASTSGVDASNQVRGEAHGSVGAAAGHRAIAQSNSAEIAEALFRYTAPEEVMTFPSTCGACAARCETRMFVTEIPYFQEVIVMASTCDACGYRSSELKPGGRIPEKGKIISLCVKDVRDLSRDVIKSDTASVRVPDLDLELTSGTLGELLQRLKV 388
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 11855430 11861707 + Lag0025362.1 Lac10g1317 583848
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac10g1317 388 FunFam zinc finger protein ZPR1 80 221 - -
Lac10g1317 388 PANTHER ZINC FINGER PROTEIN ZPR1 6 381 IPR040141 GO:0005634(PANTHER)|GO:0005737(PANTHER)
Lac10g1317 388 SMART zpr1 34 194 IPR004457 GO:0008270(InterPro)
Lac10g1317 388 SMART zpr1 289 387 IPR004457 GO:0008270(InterPro)
Lac10g1317 388 Pfam ZPR1 jelly-roll domain 352 380 - -
Lac10g1317 388 Pfam ZPR1 jelly-roll domain 99 221 - -
Lac10g1317 388 NCBIfam ZPR1 zinc finger domain 36 219 IPR004457 GO:0008270(InterPro)
Lac10g1317 388 FunFam Zinc finger protein ZPR1 280 334 - -
Lac10g1317 388 Gene3D ZPR1, A/B domain 335 387 IPR042451 -
Lac10g1317 388 Gene3D ZPR1, A/B domain 80 221 IPR042451 -
Lac10g1317 388 Pfam ZPR1 zinc-finger domain 283 338 IPR004457 GO:0008270(InterPro)
Lac10g1317 388 Pfam ZPR1 zinc-finger domain 31 83 IPR004457 GO:0008270(InterPro)
Lac10g1317 388 FunFam Zinc finger protein ZPR1 24 79 - -
Lac10g1317 388 Gene3D ZPR1, zinc finger domain 279 334 IPR042452 -
Lac10g1317 388 Gene3D ZPR1, zinc finger domain 26 79 IPR042452 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac10g1317 K06874 - csv:101208000 681.789