Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac10g1389 ATGCAGGAATCCTGCCATGTAGCATCCATAGCTGCTGGGAATGCAAGAGTTCCAGTTATTGTGAATGGTTTCTTCTATGGATTAGCCAGTGGGATGGCGCCACGTGCAAGAATTGCTGTTTACAAGGCAGTGTATCCAACAGTGGCTACTCTAACAGATGTAGTTTCAGCAATAGATCAAGCTGTTGCGGATAAAGTTGATATATTGGCATTATCAGTTGGACCAAATGAACCACCAGAAGCAGGATTTACCTTCCTAAGCATATATGACATTGCCATTCTATCTGCCACACGAGCTGGAATCCTTGTGGTTCAGGCAGCCGGAAATAACGGCCCGACCCGAGCAACCGTCGTCTCGTACAGCCCTTGGGCGGTTGGCGTGGCAGCTTCCGGCACCGACAGAGTTTATCCAGCCTCACTTATCCTTGGCAATGGCCAAAAAGTTGGAGGGCTAGGACTGTCTGGACCCACTTTGGGGAGTGAGTTTTTCCTACACAAGCTGGTATTAGCCAAGGATGCAATGAAAGATCCCAACATACCAAATTACAGTGAAGAGTGCCAATATCCTGAAGCTTTTGACCCAAATGTTGTCCAAAACAGCATAATCATCTGCTCTTTCTCTCAAGGATTTCTCAATGGAACCTCCTCTCTCACAGCCATCATTCACACTGCAACAACACTCAGATTCATGGGTTTTGTTCTCATTGCAAATCCCAACTATGGTGATTTCATAGCAGAGCCAATCCCTTTCAGAGTTCCAGGCATTCTCATCCCGAACGTATCGGATTCTAAGGTGATACTGAAGTACTATGAAGAAAATACATGCAAGGATAGAAGAGGAAGAGTTACCAAATTTGAAGGCAAAGCAGCCATAGGAGAAGGAAGGGTTGCTTCATTTGGAGGCCAAGCACCAACAGTTAGCAGATTCTCATCAAGAGGACCAGATTACATGAACAGTAATAGGACTGCAGCTGATGTGCTAAAGCCAGATATTCTTGCCCCAGGTCACCAAATTTGGGCTGCTTGGAGCCCCCTCAGTGCCTCAGAGCCACTTTTAAAGGGATACCAATTTGCACTGTTGTCTGGAACAAGTATGGCAGCACCTCATATTGTGGGAATAGCAGCACTTATCAAGCAAAAGAATCCTTCTTGGACTCCTTCCATGATAGCTTCAGCAATGTCCACAACTGCTACAAAGTATGATAGGAATGGAGACCTTATTCAGGCAGAGGGATTCAACCTTCATAGTTTATATCCTTCTACTCCCTTTGATTTGGGTGCTGGCCTCGTCTCACCGACCAATGCTTTGGACCCGGGACTGGTCTTCCCAGCAGAACATGAAGACTACATAAATTTCTTGTGCTCATTACCTGGGGCTGATCCTGCTGTCATCAAAAGCAGCACAGGAGGACAGTGCAATGGCTCTCTCCCACAGCAACACCCTGCAGATCTGAACCTTCCTTCAGTCACAATATCATCACTGGTTGGGCATCAGGTGGTGCAGAGAAGAGTGAAGAATGTAGGAGGCAAAGTGGAGACATATGTGTGGTCAGTGATCCCACCAAATGGGACAACAGTCAACATCAATCCACCATGGTTCACCATAGCACCAGAAGGGGTCCAAAACTTGGAAATACAGATCAATGTCACACACAAAATGAATCACTTTAGCTTTGGGGAGATTGTTTTCACAGGAAGTTTAAACCATATTGCTAGGATCCCTTTGTCAGTTTTGGCTGTTTCTGTATCCTAA 1752 45.89 MQESCHVASIAAGNARVPVIVNGFFYGLASGMAPRARIAVYKAVYPTVATLTDVVSAIDQAVADKVDILALSVGPNEPPEAGFTFLSIYDIAILSATRAGILVVQAAGNNGPTRATVVSYSPWAVGVAASGTDRVYPASLILGNGQKVGGLGLSGPTLGSEFFLHKLVLAKDAMKDPNIPNYSEECQYPEAFDPNVVQNSIIICSFSQGFLNGTSSLTAIIHTATTLRFMGFVLIANPNYGDFIAEPIPFRVPGILIPNVSDSKVILKYYEENTCKDRRGRVTKFEGKAAIGEGRVASFGGQAPTVSRFSSRGPDYMNSNRTAADVLKPDILAPGHQIWAAWSPLSASEPLLKGYQFALLSGTSMAAPHIVGIAALIKQKNPSWTPSMIASAMSTTATKYDRNGDLIQAEGFNLHSLYPSTPFDLGAGLVSPTNALDPGLVFPAEHEDYINFLCSLPGADPAVIKSSTGGQCNGSLPQQHPADLNLPSVTISSLVGHQVVQRRVKNVGGKVETYVWSVIPPNGTTVNINPPWFTIAPEGVQNLEIQINVTHKMNHFSFGEIVFTGSLNHIARIPLSVLAVSVS 583
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 12939452 12946091 - Lag0025434.1 Lac10g1389 583920
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac10g1389 583 SUPERFAMILY Subtilisin-like 5 440 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Lac10g1389 583 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 5 536 IPR045051 -
Lac10g1389 583 ProSitePatterns Serine proteases, subtilase family, serine active site. 362 372 IPR023828 -
Lac10g1389 583 Gene3D - 133 299 - -
Lac10g1389 583 Gene3D Peptidase S8/S53 domain 6 449 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Lac10g1389 583 Pfam Subtilase family 6 404 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Lac10g1389 583 CDD PA_subtilisin_like 139 274 - -
Lac10g1389 583 Gene3D - 453 580 - -
Lac10g1389 583 Pfam Fibronectin type-III domain 483 577 IPR041469 -
Lac10g1389 583 ProSiteProfiles Serine proteases, subtilase domain profile. 1 436 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac10g1389 Lac-Chr10:12939452 Lac6g2273 Lac-Chr6:39899532 1.20E-127 dispersed
Lac10g1389 Lac-Chr10:12939452 Lac13g1478 Lac-Chr13:14820927 1.30E-52 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac10g1389 - - - 0.0