Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac10g1390 ATGGAAGCTTCACACGAGCATGTTCTTGAAAAGAGTTTAAAGAGGTACAGAAAGGTCCATAGCTTCAAGCACATAATGAATGGGTTTGCAGTGCAGACAAGTGCATCAGAGGCGAGAAAGCTGAGAGAAGCTGAAGGGGTGAAATTGGTAGAGAGAGACAGAGGAGTGAGAAAGATGACAACTTACACCCCTGAGTTTCTAGGGATGAATATTATGCCCTACAAATCAAGGGTAGTATGGAAGAAGAAGAAGACACACAAATTATTAGATAATGGTGGTGAAGGGATTGTGATTGGGATTGTGGATTCTGGTATTGACCCAACACACCCAAGCTTTGCTGCTTTTGATGATGAGTTGCAGTTTTGTGGGGTTTGTGAAAAGGGTCCTTTTTTTCCTTCAACTTCTTGCAATGGGAAGATAGTGAGTGGTAGGTTTTTCTCAGCTGGGGCTCAGGCTGTTGCAAAGCTTAATTCTTCTATTGACTTTCTCTCCCCTTTTGATGCTGAAGGCCATGGAAGGTGCATTTTCTTACTCAAATAA 540 42.41 MEASHEHVLEKSLKRYRKVHSFKHIMNGFAVQTSASEARKLREAEGVKLVERDRGVRKMTTYTPEFLGMNIMPYKSRVVWKKKKTHKLLDNGGEGIVIGIVDSGIDPTHPSFAAFDDELQFCGVCEKGPFFPSTSCNGKIVSGRFFSAGAQAVAKLNSSIDFLSPFDAEGHGRCIFLLK 179
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 12967072 12967611 - Lag0025435.1 Lac10g1390 583921
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac10g1390 179 SUPERFAMILY Subtilisin-like 10 174 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Lac10g1390 179 Pfam Peptidase inhibitor I9 5 57 IPR010259 -
Lac10g1390 179 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 98 109 IPR023827 -
Lac10g1390 179 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 1 57 IPR037045 -
Lac10g1390 179 Gene3D Peptidase S8/S53 domain 60 175 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Lac10g1390 179 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 8 173 IPR045051 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac10g1390 Lac-Chr10:12967072 Lac1g3629 Lac-Chr1:55385447 6.20E-30 dispersed
Lac10g1390 Lac-Chr10:12967072 Lac6g2273 Lac-Chr6:39899532 3.30E-31 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac10g1390 - - - 0.0