Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lac10g1618 | ATGAAGATCTCTAATCGCTTTATTTTCTTCTCATTCGTTTCGTTTTGTTTGTTAATATCACCTGCCATTGCTGCCAAAAAGTCGTATGTGGTGTTATTGGGATCGCATTCACATGGCTTAGAAATTTCAGAGGTTGATCTTCAAAGGGTGGTTGATTCCCATTACAAATTGCTTGGATCCTTCTTGGGGAGTTATGAGAGGGCAAAAGATGCGATATTTTACTCCTACAAGAAGCATATAAACGGGTTTGCAGCAATTCTGGAGGAGGAAGAGGCAACCGAGCTTGCAAAGCACCCAGAAGTAGCAGCAGTATTGCCAAACAGAGCAAAAAAATTACACACAACACATTCATGGGAGTTCATGCGTTTGGAGAAGAATGGTGTAATTCCTCCTTTGTCTCCTTGGCGGAAGGCTAAATTTGGAAAAGACGCTATTATCGCCAATCTCGACACCGGTGTATGGCCGGAGTCCAAGAGTTTCGGAGAACAAGGCATCGTTGGACCTGTCCCATCAAAGTGGAAAGGAGGTTGCACCGATAACTCCACTGATCGAGTGCCTTGCAACAGGAAATTAATCGGAGCGAAATACTTCAACGAGGGATTCATCGCGTATCTGAAATACGACAACTCCTCGGTCGATCTCTCATCCGTAATCAACTCCACTCGCGACTACGAAGGCCACGGTTCCCACACGCTGTCGACGGCCGCCGGAAGCTTCGTGCCCGGCGCCAGCGTGTTCGGCTCGGGTCTTGGAACCGCCAAAGGCGGCTCTCCGAAGGCCCGCGTCGCCGCCTATAAGGTCTGCTGGCCGGTCGAGGGCGGCGGGTGCTTCGACGCCGACATCACCGAGGCCTTCGACCACGCCATCCACGACGGTGTTGACGTGCTTTCCCTCTCGCTCGGCGGCGAGGCGGCCGATTACTTCGACGATTCCATCGCCATCGCCGCCTTTCATGCCGTGAAGAAGGGGATCCCCGTCGTGTGCTCGGCTGGTAACTCCGGGCCTGAGGCGGAGACTGCCTCGAATACTGCTCCTTGGATTTTGACTGTTGGTGCGAGTACTTTGGACCGCGAGTTTCAGGCTCCTGTTGAGCTCAAAAATGGTCACCGCTATATGGGTTCGAGCCTTTCGAAAGCATTGGCAGAAGACCAGCTATACCCATTGATAACAGGAGCTCAGGCGAAAGCGAAGAATGCGAGCGTGGAGGACGCGACGCTGTGCATGGCGAATAGTTTGGATCATTCAAAAGTAAAAGGAAAGATCTTGGCTTGCTTGAGAGGAGAAACTGCAAGAGTGGACAAAGGAGAACAGGCGGTCCTTGCCGGAGCTGTGGGAATGATTCTATGCAACGACGAGCTCAGTGGGTTTGAAACCATCGCGGATCCCCACGTTCTTCCTGCTTCACATATCAATTACAATGACGGCCAAGCTGTTCTCTCTTACATCAATTCCACTCCAAATCCGATGGGTTATTTGATCCCGCCGTCGGCCAAACTTAATACAAGACCTGCTCCGACTATGGCGGCCTTCTCGTCCCGAGGGCCTAACGTTATTTCTCCTGAGATTATCAAGCCCGATGTGACCGCACCCGGCGTGAACGTAATCGCGGCATTCACAAGAGCCGTAAGCCCAACAGGTGAGCCCTTCGACAACAGAAGCGTTCCATTCATAACCATGTCAGGCACCTCCATGTCCTGCCCCCACGTCTCGGGCCTCGTCGGCCTCCTCAGAACTCTCTACCCTGACTGGAGCCCCTCCGCCATCAAATCCGCCATCATGACCTCTGCCAGAGTCCGTGACAACACAATGAAGCCCATGCTTGACGGCGGCTCCTCCGACCTCGGCCCGGCCACCCCTTTCTCCTACGGCTCCGGCCACATCCGCCCCATCGGAGCAGCCGATCCCGGCCTAGTCTACGACCTCTCCCCCAACGACTACTTGGAATTCCTCTGCGCTAGTGGCTATAATGAAAAAGCCATTCAGATATTCTCGGATGGCCCCTTTAAATGCCCCGCTTCGGCCAGCATTTTGGACTTCAATTACCCTTCCATTGCGGTCCAGAATTTGACTGGCAGCGTTACGGTCACGAGGAAATTGAAAAACGTTGGGTCTCCTGGGGTTTATAAAGCTCGAGTCCGCCAACCCGAAGGGGTTAAGGTTCTGGTTGAGCCGAGTGTTTTGAAGTTTGAGAAAGTTGGAGAGGAGAAGAGCTTCAAACTGACGATGATCGGACCTGTGCCGAAGAATCGCGTGGTGGATGGGACGCTGATTTGGACTGACAAGAATCACTTTGTTCGGAGTCCCATTGTTGTTTCTTCTGGCTTGTTCTGA | 2331 | 52.6 | MKISNRFIFFSFVSFCLLISPAIAAKKSYVVLLGSHSHGLEISEVDLQRVVDSHYKLLGSFLGSYERAKDAIFYSYKKHINGFAAILEEEEATELAKHPEVAAVLPNRAKKLHTTHSWEFMRLEKNGVIPPLSPWRKAKFGKDAIIANLDTGVWPESKSFGEQGIVGPVPSKWKGGCTDNSTDRVPCNRKLIGAKYFNEGFIAYLKYDNSSVDLSSVINSTRDYEGHGSHTLSTAAGSFVPGASVFGSGLGTAKGGSPKARVAAYKVCWPVEGGGCFDADITEAFDHAIHDGVDVLSLSLGGEAADYFDDSIAIAAFHAVKKGIPVVCSAGNSGPEAETASNTAPWILTVGASTLDREFQAPVELKNGHRYMGSSLSKALAEDQLYPLITGAQAKAKNASVEDATLCMANSLDHSKVKGKILACLRGETARVDKGEQAVLAGAVGMILCNDELSGFETIADPHVLPASHINYNDGQAVLSYINSTPNPMGYLIPPSAKLNTRPAPTMAAFSSRGPNVISPEIIKPDVTAPGVNVIAAFTRAVSPTGEPFDNRSVPFITMSGTSMSCPHVSGLVGLLRTLYPDWSPSAIKSAIMTSARVRDNTMKPMLDGGSSDLGPATPFSYGSGHIRPIGAADPGLVYDLSPNDYLEFLCASGYNEKAIQIFSDGPFKCPASASILDFNYPSIAVQNLTGSVTVTRKLKNVGSPGVYKARVRQPEGVKVLVEPSVLKFEKVGEEKSFKLTMIGPVPKNRVVDGTLIWTDKNHFVRSPIVVSSGLF | 776 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 17263305 | 17267641 | + | Lag0025663.1 | Lac10g1618 | 584149 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lac10g1618 | 776 | CDD | PA_subtilisin_like | 363 | 492 | - | - | |
Lac10g1618 | 776 | Gene3D | Peptidase S8 propeptide/proteinase inhibitor I9 | 19 | 113 | IPR037045 | - | |
Lac10g1618 | 776 | ProSiteProfiles | Serine proteases, subtilase domain profile. | 117 | 633 | - | - | |
Lac10g1618 | 776 | Pfam | Peptidase inhibitor I9 | 28 | 113 | IPR010259 | - | |
Lac10g1618 | 776 | ProSitePatterns | Serine proteases, subtilase family, serine active site. | 561 | 571 | IPR023828 | - | |
Lac10g1618 | 776 | Gene3D | - | 650 | 774 | - | - | |
Lac10g1618 | 776 | Gene3D | - | 356 | 500 | - | - | |
Lac10g1618 | 776 | SUPERFAMILY | Subtilisin-like | 112 | 637 | IPR036852 | GO:0004252(InterPro)|GO:0006508(InterPro) | |
Lac10g1618 | 776 | Gene3D | Peptidase S8/S53 domain | 143 | 646 | IPR036852 | GO:0004252(InterPro)|GO:0006508(InterPro) | |
Lac10g1618 | 776 | CDD | Peptidases_S8_3 | 110 | 596 | IPR034197 | - | |
Lac10g1618 | 776 | PANTHER | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN | 54 | 770 | IPR045051 | - | |
Lac10g1618 | 776 | Pfam | Fibronectin type-III domain | 678 | 771 | IPR041469 | - | |
Lac10g1618 | 776 | FunFam | Subtilisin-like protease SBT5.3 | 18 | 113 | - | - | |
Lac10g1618 | 776 | FunFam | Subtilisin-like protease SBT1.5 | 650 | 774 | - | - | |
Lac10g1618 | 776 | FunFam | subtilisin-like protease SBT1.5 | 356 | 499 | - | - | |
Lac10g1618 | 776 | SUPERFAMILY | PA domain | 414 | 485 | IPR046450 | - | |
Lac10g1618 | 776 | FunFam | Subtilisin-like protease SBT1.5 | 143 | 369 | - | - | |
Lac10g1618 | 776 | Pfam | PA domain | 403 | 477 | IPR003137 | - | |
Lac10g1618 | 776 | PRINTS | Subtilisin serine protease family (S8) signature | 141 | 160 | IPR015500 | - | |
Lac10g1618 | 776 | PRINTS | Subtilisin serine protease family (S8) signature | 223 | 236 | IPR015500 | - | |
Lac10g1618 | 776 | PRINTS | Subtilisin serine protease family (S8) signature | 560 | 576 | IPR015500 | - | |
Lac10g1618 | 776 | Pfam | Subtilase family | 141 | 607 | IPR000209 | GO:0006508(InterPro)|GO:0008236(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lac10g1618 | Lac-Chr10:17263305 | Lac12g0418 | Lac-Chr12:4687471 | 1.60E-244 | dispersed | |
Lac10g1618 | Lac-Chr10:17263305 | Lac10g1676 | Lac-Chr10:18474780 | 3.50E-279 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lac10g1618 | - | - | - | 0.0 |