Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac10g1618 ATGAAGATCTCTAATCGCTTTATTTTCTTCTCATTCGTTTCGTTTTGTTTGTTAATATCACCTGCCATTGCTGCCAAAAAGTCGTATGTGGTGTTATTGGGATCGCATTCACATGGCTTAGAAATTTCAGAGGTTGATCTTCAAAGGGTGGTTGATTCCCATTACAAATTGCTTGGATCCTTCTTGGGGAGTTATGAGAGGGCAAAAGATGCGATATTTTACTCCTACAAGAAGCATATAAACGGGTTTGCAGCAATTCTGGAGGAGGAAGAGGCAACCGAGCTTGCAAAGCACCCAGAAGTAGCAGCAGTATTGCCAAACAGAGCAAAAAAATTACACACAACACATTCATGGGAGTTCATGCGTTTGGAGAAGAATGGTGTAATTCCTCCTTTGTCTCCTTGGCGGAAGGCTAAATTTGGAAAAGACGCTATTATCGCCAATCTCGACACCGGTGTATGGCCGGAGTCCAAGAGTTTCGGAGAACAAGGCATCGTTGGACCTGTCCCATCAAAGTGGAAAGGAGGTTGCACCGATAACTCCACTGATCGAGTGCCTTGCAACAGGAAATTAATCGGAGCGAAATACTTCAACGAGGGATTCATCGCGTATCTGAAATACGACAACTCCTCGGTCGATCTCTCATCCGTAATCAACTCCACTCGCGACTACGAAGGCCACGGTTCCCACACGCTGTCGACGGCCGCCGGAAGCTTCGTGCCCGGCGCCAGCGTGTTCGGCTCGGGTCTTGGAACCGCCAAAGGCGGCTCTCCGAAGGCCCGCGTCGCCGCCTATAAGGTCTGCTGGCCGGTCGAGGGCGGCGGGTGCTTCGACGCCGACATCACCGAGGCCTTCGACCACGCCATCCACGACGGTGTTGACGTGCTTTCCCTCTCGCTCGGCGGCGAGGCGGCCGATTACTTCGACGATTCCATCGCCATCGCCGCCTTTCATGCCGTGAAGAAGGGGATCCCCGTCGTGTGCTCGGCTGGTAACTCCGGGCCTGAGGCGGAGACTGCCTCGAATACTGCTCCTTGGATTTTGACTGTTGGTGCGAGTACTTTGGACCGCGAGTTTCAGGCTCCTGTTGAGCTCAAAAATGGTCACCGCTATATGGGTTCGAGCCTTTCGAAAGCATTGGCAGAAGACCAGCTATACCCATTGATAACAGGAGCTCAGGCGAAAGCGAAGAATGCGAGCGTGGAGGACGCGACGCTGTGCATGGCGAATAGTTTGGATCATTCAAAAGTAAAAGGAAAGATCTTGGCTTGCTTGAGAGGAGAAACTGCAAGAGTGGACAAAGGAGAACAGGCGGTCCTTGCCGGAGCTGTGGGAATGATTCTATGCAACGACGAGCTCAGTGGGTTTGAAACCATCGCGGATCCCCACGTTCTTCCTGCTTCACATATCAATTACAATGACGGCCAAGCTGTTCTCTCTTACATCAATTCCACTCCAAATCCGATGGGTTATTTGATCCCGCCGTCGGCCAAACTTAATACAAGACCTGCTCCGACTATGGCGGCCTTCTCGTCCCGAGGGCCTAACGTTATTTCTCCTGAGATTATCAAGCCCGATGTGACCGCACCCGGCGTGAACGTAATCGCGGCATTCACAAGAGCCGTAAGCCCAACAGGTGAGCCCTTCGACAACAGAAGCGTTCCATTCATAACCATGTCAGGCACCTCCATGTCCTGCCCCCACGTCTCGGGCCTCGTCGGCCTCCTCAGAACTCTCTACCCTGACTGGAGCCCCTCCGCCATCAAATCCGCCATCATGACCTCTGCCAGAGTCCGTGACAACACAATGAAGCCCATGCTTGACGGCGGCTCCTCCGACCTCGGCCCGGCCACCCCTTTCTCCTACGGCTCCGGCCACATCCGCCCCATCGGAGCAGCCGATCCCGGCCTAGTCTACGACCTCTCCCCCAACGACTACTTGGAATTCCTCTGCGCTAGTGGCTATAATGAAAAAGCCATTCAGATATTCTCGGATGGCCCCTTTAAATGCCCCGCTTCGGCCAGCATTTTGGACTTCAATTACCCTTCCATTGCGGTCCAGAATTTGACTGGCAGCGTTACGGTCACGAGGAAATTGAAAAACGTTGGGTCTCCTGGGGTTTATAAAGCTCGAGTCCGCCAACCCGAAGGGGTTAAGGTTCTGGTTGAGCCGAGTGTTTTGAAGTTTGAGAAAGTTGGAGAGGAGAAGAGCTTCAAACTGACGATGATCGGACCTGTGCCGAAGAATCGCGTGGTGGATGGGACGCTGATTTGGACTGACAAGAATCACTTTGTTCGGAGTCCCATTGTTGTTTCTTCTGGCTTGTTCTGA 2331 52.6 MKISNRFIFFSFVSFCLLISPAIAAKKSYVVLLGSHSHGLEISEVDLQRVVDSHYKLLGSFLGSYERAKDAIFYSYKKHINGFAAILEEEEATELAKHPEVAAVLPNRAKKLHTTHSWEFMRLEKNGVIPPLSPWRKAKFGKDAIIANLDTGVWPESKSFGEQGIVGPVPSKWKGGCTDNSTDRVPCNRKLIGAKYFNEGFIAYLKYDNSSVDLSSVINSTRDYEGHGSHTLSTAAGSFVPGASVFGSGLGTAKGGSPKARVAAYKVCWPVEGGGCFDADITEAFDHAIHDGVDVLSLSLGGEAADYFDDSIAIAAFHAVKKGIPVVCSAGNSGPEAETASNTAPWILTVGASTLDREFQAPVELKNGHRYMGSSLSKALAEDQLYPLITGAQAKAKNASVEDATLCMANSLDHSKVKGKILACLRGETARVDKGEQAVLAGAVGMILCNDELSGFETIADPHVLPASHINYNDGQAVLSYINSTPNPMGYLIPPSAKLNTRPAPTMAAFSSRGPNVISPEIIKPDVTAPGVNVIAAFTRAVSPTGEPFDNRSVPFITMSGTSMSCPHVSGLVGLLRTLYPDWSPSAIKSAIMTSARVRDNTMKPMLDGGSSDLGPATPFSYGSGHIRPIGAADPGLVYDLSPNDYLEFLCASGYNEKAIQIFSDGPFKCPASASILDFNYPSIAVQNLTGSVTVTRKLKNVGSPGVYKARVRQPEGVKVLVEPSVLKFEKVGEEKSFKLTMIGPVPKNRVVDGTLIWTDKNHFVRSPIVVSSGLF 776
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 17263305 17267641 + Lag0025663.1 Lac10g1618 584149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac10g1618 776 CDD PA_subtilisin_like 363 492 - -
Lac10g1618 776 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 19 113 IPR037045 -
Lac10g1618 776 ProSiteProfiles Serine proteases, subtilase domain profile. 117 633 - -
Lac10g1618 776 Pfam Peptidase inhibitor I9 28 113 IPR010259 -
Lac10g1618 776 ProSitePatterns Serine proteases, subtilase family, serine active site. 561 571 IPR023828 -
Lac10g1618 776 Gene3D - 650 774 - -
Lac10g1618 776 Gene3D - 356 500 - -
Lac10g1618 776 SUPERFAMILY Subtilisin-like 112 637 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Lac10g1618 776 Gene3D Peptidase S8/S53 domain 143 646 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Lac10g1618 776 CDD Peptidases_S8_3 110 596 IPR034197 -
Lac10g1618 776 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 54 770 IPR045051 -
Lac10g1618 776 Pfam Fibronectin type-III domain 678 771 IPR041469 -
Lac10g1618 776 FunFam Subtilisin-like protease SBT5.3 18 113 - -
Lac10g1618 776 FunFam Subtilisin-like protease SBT1.5 650 774 - -
Lac10g1618 776 FunFam subtilisin-like protease SBT1.5 356 499 - -
Lac10g1618 776 SUPERFAMILY PA domain 414 485 IPR046450 -
Lac10g1618 776 FunFam Subtilisin-like protease SBT1.5 143 369 - -
Lac10g1618 776 Pfam PA domain 403 477 IPR003137 -
Lac10g1618 776 PRINTS Subtilisin serine protease family (S8) signature 141 160 IPR015500 -
Lac10g1618 776 PRINTS Subtilisin serine protease family (S8) signature 223 236 IPR015500 -
Lac10g1618 776 PRINTS Subtilisin serine protease family (S8) signature 560 576 IPR015500 -
Lac10g1618 776 Pfam Subtilase family 141 607 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac10g1618 Lac-Chr10:17263305 Lac12g0418 Lac-Chr12:4687471 1.60E-244 dispersed
Lac10g1618 Lac-Chr10:17263305 Lac10g1676 Lac-Chr10:18474780 3.50E-279 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac10g1618 - - - 0.0