Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac10g1676 ATGGTCGATAATCAGAGGTCAACGATGGCGGACAATAGTCAAAGGTCGACGGTGGCGCCCGATAGTCAAAGGTCAACGTCGAAGGTCAACGGTAGCGGTCAGTTGATGGAGGCCGGTCAATGGAGGTCGGTGGCGGCTGGTCAACAGAGGTCGGTGGCGGCCGGTAGTCGGAGCTTAGGGGGCGTTGCCCCCGAACCCCCACCGGGCGTTTCGCCCCTGGACCCCGACTCGCTGACCGGGCAGCGAGACCTCGTACTGGGTCGTTCGGAGCGCTTCCTATCAGATTCAAGGCATATCAACAATGCATATAAAACTAAAAAGTCATATGTGGTGCTGTTGGGATCCCATTCACATGGGTTGGAAGTTTCAGAAGCTGATCTTCAACGGGTGACTAATTCCCATTACAAATTGCTTGGATCCTTCTTGGGGAGTAATAAGAAGGCTAAAGATGCCATATTCTACTCCTACAAGAAGCATATCAATGGCTTTGCAGCAATGCTGGAGGAGGAAGAGGCAGCTGAGCTTGCAAAGCACCGAGAAGTTGCAGTAGTTTTGGGAAATGAAATGATGGAATTACATACAACCCATTCTGTTGGGGAGTGGACAATATCATACCATTGTGGAGATTTGTGTCGTGTCCTCGTCCCTTACACATTCATGGCGCTTCATGCATTTGGAGAGGAATGCTTCAGCAACCTAGACTCTGGCGTGTGGCCTGAGTCCATGAGCTTCAAAGATGATGGTATTAATAAACCTATTCCTTCCAAATGGAAAGGAAGCTGCGAGAATCCTCACAATAATGGATTTCACTGCAACAGAAAACTAATCGGAGCCAAATTCTTCAACGAGGGTTACATAGCATACATGCGATCAATCAACGCAAATTTCGACGTGTCCAGCGTCATCAACTCCACACATGACTACGCCGGCCACGGCTCCCACACCCTGTCGACGGCCGGCGGGAATTTCGTGGCGCCCAAGGACGTGTTCGGGTCCTCCGGGTTCGGATCGGCGAAAGGCGGCTCGCCCAGGGCCCGAGTGGCTGCCTACAAGGTGTGCTGGGGGGACAACGTCGGCTGCCCCACCGCCGACATCCTACAAGGCGTGGACGAGGCCATTCACGACGGCGTCGACGTCATCTCCTACTCCGTTGGCGGCGGTCCTTCTCCTTTCTACCAAGATGGCTTTGCCATCGCCTCCTTTCACGCCGTTAAGAACGGTATCTCCGTCGTCTGCTCCGCCGGCAACTCCGGCCCCGACCCTGGATCCGCCGTCAATCTTGCCCCTTGGATGCTCACTGTCGGTGCTAGCACTTTGGACCGCCGGATTGCATCTGTTGTTCAGCTCAATAACGGCCAAAGCTTTCAGGGAGAGAGCCTTTCGAAGGGGTTACCAGAGGAGAAATACTACCCATTGATCAGCGGAGGTCAGGCAGCCGCTGCCGGAGCATATAGCGGCGACGCCATGCTGTGCAAGCCCGGAACTCTAGATCCGGCAAAGGTGAAAGGAAAGATATTGGCGTGCTTAAGAGGAGAAACCGCAAGAATCGACAAAGGAATTCAAGCCGAGAATGCCGGCGCTGTGGGAATGGTCCTTTGCAATGATGAGGGCAACGGCGAGCAAATCTTAGCTGACTTCCACGTGCTTCCCGCCATCCAGATTGGCTACGAAGATGGTCTCGCCGTCTTTAACTACATCGACAACACCCAAAATCCAAGCGCGTATATTGTACCACCTACAGAGAAGTTCGACGTGACGCCAGCTCCTATCATGGCTAAATTCTCATCCAGAGGACCCAACCTAATCACACCCGAGATTATTAAGCCTGATATCACTGCACCTGGCGTGAACATTATAGCAGCGACTACACAAGCACACAGCCCCTCCGACGATCCTTCCCACAACCGGAAGACTCCTTACGTTAGCATGTCTGGAACATCCATGTCTTGCCCACACATCTCTGGCGTCGTCGGCCTCCTCAAGACACTCCACCCCGACTGGAGCCCCGCCGCCATCAAATCCGCCATCATGACCTCTGCCAGGGTGAGAGACAACACCATGCACCCAATGCAAGACGGCGGCTCAGAGCGAGGCGAACTGGCGACCCCATTCAGCTACGGCTCTGGCCACGTCCAACCGGTCGGAGCCATGGACCCCGGGTTGGTCTACGACCTGACCACCGAAGACTACTTGGACTTCCTCTGCGCCCTAGGGTACGACGAGAGCATGATGAGAGTCTTCTCCGATGAGGCGTACCAGTGCCCGCCATCAGCCAGTCTTCTGAACTTCAACTACCCGTCGATCGCAGTCCAGAACCTGAACAACGGGAGAGTCACCGTCACCAGAAAACTGAAGAACGTGGGAAGTCCGGGCGAGTACAAGGCGAGCGTCCGGCGGCCAGAAGGAGTTAACGTGGTGGTGGAGCCGAGGGTTCTGAAGTTTGACCAAGTTGGAGAAGAGAAGAGCTTCACTGTGACACTCTCCGGAGCTTCGCCGCTAAACGCCGTGGTTGATGGAATTCTGATTTGGTCGGACGGCAAGCACTTCGTTAGCAGCCCTATTGTGGTTTCTTCTGGCCCCTTCGCATAG 2589 54.54 MVDNQRSTMADNSQRSTVAPDSQRSTSKVNGSGQLMEAGQWRSVAAGQQRSVAAGSRSLGGVAPEPPPGVSPLDPDSLTGQRDLVLGRSERFLSDSRHINNAYKTKKSYVVLLGSHSHGLEVSEADLQRVTNSHYKLLGSFLGSNKKAKDAIFYSYKKHINGFAAMLEEEEAAELAKHREVAVVLGNEMMELHTTHSVGEWTISYHCGDLCRVLVPYTFMALHAFGEECFSNLDSGVWPESMSFKDDGINKPIPSKWKGSCENPHNNGFHCNRKLIGAKFFNEGYIAYMRSINANFDVSSVINSTHDYAGHGSHTLSTAGGNFVAPKDVFGSSGFGSAKGGSPRARVAAYKVCWGDNVGCPTADILQGVDEAIHDGVDVISYSVGGGPSPFYQDGFAIASFHAVKNGISVVCSAGNSGPDPGSAVNLAPWMLTVGASTLDRRIASVVQLNNGQSFQGESLSKGLPEEKYYPLISGGQAAAAGAYSGDAMLCKPGTLDPAKVKGKILACLRGETARIDKGIQAENAGAVGMVLCNDEGNGEQILADFHVLPAIQIGYEDGLAVFNYIDNTQNPSAYIVPPTEKFDVTPAPIMAKFSSRGPNLITPEIIKPDITAPGVNIIAATTQAHSPSDDPSHNRKTPYVSMSGTSMSCPHISGVVGLLKTLHPDWSPAAIKSAIMTSARVRDNTMHPMQDGGSERGELATPFSYGSGHVQPVGAMDPGLVYDLTTEDYLDFLCALGYDESMMRVFSDEAYQCPPSASLLNFNYPSIAVQNLNNGRVTVTRKLKNVGSPGEYKASVRRPEGVNVVVEPRVLKFDQVGEEKSFTVTLSGASPLNAVVDGILIWSDGKHFVSSPIVVSSGPFA 862
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 18474780 18480674 - Lag0025721.1 Lac10g1676 584207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac10g1676 862 CDD Peptidases_S8_3 233 680 IPR034197 -
Lac10g1676 862 FunFam Subtilisin-like protease SBT5.3 97 193 - -
Lac10g1676 862 Pfam Fibronectin type-III domain 762 856 IPR041469 -
Lac10g1676 862 ProSiteProfiles Serine proteases, subtilase domain profile. 216 717 - -
Lac10g1676 862 FunFam subtilisin-like protease SBT1.5 440 583 - -
Lac10g1676 862 SUPERFAMILY PA domain 480 568 IPR046450 -
Lac10g1676 862 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 93 193 IPR037045 -
Lac10g1676 862 Gene3D - 440 583 - -
Lac10g1676 862 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 134 854 IPR045051 -
Lac10g1676 862 MobiDBLite consensus disorder prediction 1 37 - -
Lac10g1676 862 FunFam Subtilisin-like protease SBT1.5 229 460 - -
Lac10g1676 862 Pfam Subtilase family 234 709 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Lac10g1676 862 Pfam PA domain 489 561 IPR003137 -
Lac10g1676 862 CDD PA_subtilisin_like 446 576 - -
Lac10g1676 862 Gene3D Peptidase S8/S53 domain 233 730 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Lac10g1676 862 MobiDBLite consensus disorder prediction 1 79 - -
Lac10g1676 862 Pfam Peptidase inhibitor I9 108 193 IPR010259 -
Lac10g1676 862 FunFam Subtilisin-like protease SBT1.5 734 859 - -
Lac10g1676 862 SUPERFAMILY Subtilisin-like 234 721 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Lac10g1676 862 ProSitePatterns Serine proteases, subtilase family, serine active site. 645 655 IPR023828 -
Lac10g1676 862 Gene3D - 734 859 - -
Lac10g1676 862 PRINTS Subtilisin serine protease family (S8) signature 307 320 IPR015500 -
Lac10g1676 862 PRINTS Subtilisin serine protease family (S8) signature 644 660 IPR015500 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac10g1676 Lac-Chr10:18474780 Lac12g0418 Lac-Chr12:4687471 2.00E-222 dispersed
Lac9g0081 Lac-Chr9:1166241 Lac10g1676 Lac-Chr10:18474780 5.80E-10 dispersed
Lac10g1618 Lac-Chr10:17263305 Lac10g1676 Lac-Chr10:18474780 3.50E-279 transposed
Lac10g1458 Lac-Chr10:13970144 Lac10g1676 Lac-Chr10:18474780 4.60E-15 wgd
Lac10g1676 Lac-Chr10:18474780 Lac2g2679 Lac-Chr2:41234342 2.30E-109 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac10g1676 - - - 0.0