Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac10g1679 ATGACGAGAGCTTTTAGAAGACGAACTTTGTATTCAAGGCCCATAGATCGCCTCCGTTTCCGAGCATCGGCGGACGCTGCTTCAAAATCTGGATTCATCAGAGAGATGAAGCTGAAGGAGATCTTGACTTCTTTACTAATAGGTTTTCCGTTGGTCGTTTTTGTTGTTTTGGTGCTTAGGAATCCGGCGGTGGATCTCTCTATGGGTTTTGCCGAAGCCAGAGCATTGGAAAGAGTTGCCAGTAATGGCAGTTCTGAGAGTTCAGGTTCAGAAAACGGTTTCTCTCAACTTTCCAATAGAGACAAACTTATTGGAGGCCTTCTCATTCCTGGATTTGATGAAGGATCATGCTTGAGCAGATATCAATCCAGTTTATATAGAAGAACTTCAACCCAAAAACCTTCGTCTTACCTCCTCTCAAAACTTAGAGAATACGAAGCTCTTCATCGACGCTGTGGGCCCCATACGAAACCTTATGATGAAGCAGTAAAGCAACTCAGATCTGGCAGTAGTGGTAGTTTGACAGAGTGTAAATATGTTGTGTGGATATCTTATAGTGGCTTGGGAAACAAAATGCTCACTTTGGCTTCTGCATTCCTCTATGCCCTCCTTACCAACCGTGTCTTGCTTGTTGACCCAGGGAAGGATATGGCTGACCTATTTTGTGAACCATTCCCAGAAAAATCTTGGTTGCTTCCAAATGACTTCCCCTTGATGGATCAATTTGGCAACTTTGATCCGAAATCTCCTAATTGTCATGGAAATATGCTGAAGACAAACACTCTAAACACATCGATAGAGTCGCTCCCATCGTATCTATATCTACATTTGGTTCATGACTATGATGATCATGATAAACTTTTCTTTTGTGATCAAGAACAGGCTCTTTTAGGTAGAGTCCCTTGGCTAATACTCAAGACAGATAACTACTTTGTTCCATCTCTTTTCCTGATCCCGTCTTTTGAGCACGAACTGAGTAACTTATTTCCCCAAAAAGACACCGTGTTCCATCATCTGGGTCGGTATCTTTTCCATCCTTCAAATCATGTTTGGGGATTAATTACGAGATACTATGAAGCATACCTATCAAGGGCAGATGAAAGAATAGGAATTCAAGTAAGAGTGTTCGAGAGTGAACCGGGGCCATTCGAACATATAATGAATCAGATTTTAGGCTGTACTCTGAAGGAGAAGCTACTGCCTGAGGTAGACAAGGAAGGCTTCTCTTCCATTCCTTTGGAACGCCCAAGAGTGAAAGTTGTTTTGATGACATCTTTAAGTTCTGGATATTATGAAAAAATAAGAACCTTGTACTGGGAAAACCCGACCACAACCGGAGAGGTCGTTGCAGTTTACCAGCCGAGCTACGAAATGTATCAGCAGACAGAGAAGAAGACTCACAACAGGAAAGCATGGGCAGAAATGTATCTTCTGAGTTTGAGTGATGTATTGGTGACCAGTGCATGGTCAACGTTCGGCTATGTGGCTCAAGGACTCGGCGGATCGAAGCCGTGGATTCTTTACAAGGCGGAGAACATGACTACGCCTGATCCACCGTGTCGTCGAGCAATGTCAATAGAGCCTTGCTTTCATGCTCCTCCATTCTATGACTGCAAGGCAAAGAAAGGAATAGATACTGGTGAAATTGTTCCCCATGTAAGACATTGTGAAGACATGAGCTGGGGATTAAGCTTGTTCACCATGAGGTATAATAATGAAATTTGTCCATAG 1731 42.98 MTRAFRRRTLYSRPIDRLRFRASADAASKSGFIREMKLKEILTSLLIGFPLVVFVVLVLRNPAVDLSMGFAEARALERVASNGSSESSGSENGFSQLSNRDKLIGGLLIPGFDEGSCLSRYQSSLYRRTSTQKPSSYLLSKLREYEALHRRCGPHTKPYDEAVKQLRSGSSGSLTECKYVVWISYSGLGNKMLTLASAFLYALLTNRVLLVDPGKDMADLFCEPFPEKSWLLPNDFPLMDQFGNFDPKSPNCHGNMLKTNTLNTSIESLPSYLYLHLVHDYDDHDKLFFCDQEQALLGRVPWLILKTDNYFVPSLFLIPSFEHELSNLFPQKDTVFHHLGRYLFHPSNHVWGLITRYYEAYLSRADERIGIQVRVFESEPGPFEHIMNQILGCTLKEKLLPEVDKEGFSSIPLERPRVKVVLMTSLSSGYYEKIRTLYWENPTTTGEVVAVYQPSYEMYQQTEKKTHNRKAWAEMYLLSLSDVLVTSAWSTFGYVAQGLGGSKPWILYKAENMTTPDPPCRRAMSIEPCFHAPPFYDCKAKKGIDTGEIVPHVRHCEDMSWGLSLFTMRYNNEICP 576
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 18535328 18537924 + Lag0025724.1 Lac10g1679 584210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac10g1679 576 FunFam Galactoside 2-alpha-L-fucosyltransferase 175 226 - -
Lac10g1679 576 Gene3D - 174 224 - -
Lac10g1679 576 PANTHER FUCOSYLTRANSFERASE 2-RELATED 41 567 IPR004938 GO:0005794(PANTHER)|GO:0008107(InterPro)|GO:0009969(PANTHER)|GO:0016020(InterPro)|GO:0042546(InterPro)
Lac10g1679 576 Pfam Xyloglucan fucosyltransferase 98 539 IPR004938 GO:0008107(InterPro)|GO:0016020(InterPro)|GO:0042546(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac10g0093 Lac-Chr10:728333 Lac10g1679 Lac-Chr10:18535328 2.40E-195 dispersed
Lac10g1679 Lac-Chr10:18535328 Lac5g2338 Lac-Chr5:42048607 2.50E-157 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac10g1679 K13681 - csv:101216541 1034.25