Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lac10g1894 | ATGGGTTCAATGGTATTGGAATTACTCCACTCTCTCCCTTCCACAATCTCCGTCGTATTCTTCTCGTTCACGGCCGTGTTCTCTCTGTTCTCCCTCTCCCTGTTCATCCTCCGGCTGAAGCCGTGCTGCAACTGCTCACTCTGCCGCTCCTACCTCTCCTCCTCATGGGCCTCCTCCTTTCCCAATCTCTCCGACTGGTACACCCACCTCCTCTCCCAGTCCCCCTCCGCCACCATCCACCTCCACGTGCTCTCCAACATCCTCACCGCCAACCCGGACAACGTCCAGCACATCCTCAACTCCAACTTCCACAACTACCCCAAGGGCAAGCCCTTCTCCTCCATCCTCGGCGACCTCCTCGGCCACGGCATCTTCAACGTCGACGGGCCCTCCTGGCTCTTCCAGCGCAAGATGGCCAGCTTGGAGCTCGGCAGCCTCTCCGTCCGCTCCCACGCCTTCCACATCGCCACTGCACAGATTCGCTCCAGGCTGCTTCCGCTGCTCTCATCCGTCGCCCACACTAAGGATGTGTTGGACCTTCAGGACGTGTTTAGGCGATTCTCCTTTGATAACATTTGCCGATTCTCCTTCGGCTTGGACCCGGGCTGCTTGACCCTCTCCATGCCCATTTCGGAGTTCGCTGTGGCCTTTGACTTGGCCTCCAGGCTGTCCGCCGAACGGGCTCTCGCGGCCTCCCCGGTTATGTGGAGGATTAAGCGGGTTCTGAGGTTGGGCTCTGAGAGGAAGCTGAGGGAGGCCATTAAGATGGTGGATGGTCTTGCTATGGAAGTCATTCGACAGCGGAGGCAGATTGGCTTCTCTCACCGGAATGATCTTCTATCCAGATTCATGGCTTCCACCGATGATGATCGATATCTCCGAGACATCGTCGTCAGCTTCCTCCTCGCCGGTCGGGACACGGTTGCGTCGGCGTTGACCAGCCTCTTCTGGCTACTCTCGCAGAACCCCGAAGTGGAGTCCGAGATTCTCTCCGAATCCGACCGGGTCATGGGTCCGGACCGGGACGCGGTCCCCAGTTTCGAGAATCTTAGAGACATGCACTACCTTCATGCGGCGGTCTACGAGAACATGCGCCTCTTCCCGCCGGTTCAGTTCGACTCCAAGTTCGCCGAGGAAGATGACATCTTGCCGGACGGCACCTTTGTGCAGAAGGGCACAAGGGTAACTTACCACCCCTACGCCATGGGTCGGATGGACCGGATTTGGGGACCCGATTGTCTCCAGTTCAAACCAGAGAGGTGGCTCAAAAATGGCTGCTTTGCTCCCGAAAATCCGTTTAAGTTCCCGGTTTTCCAGGCCGGTTTGAGGGTTTGTTTGGGGAAGGAGCTGGCCGTGATGGACGTGAAATGCGTGGCAGTGGCGTTGATTCGGAAGTTTAAGGTCCTGTTGGATGGAACGGACGGGGTTGCCCGGTTTGCTCCCGGTCTGACGGCCAGCTGGAGAGGCGGGTTGCCGGTTCGAATTGAAGAAAGAACCACCTGTTGA | 1506 | 57.9 | MGSMVLELLHSLPSTISVVFFSFTAVFSLFSLSLFILRLKPCCNCSLCRSYLSSSWASSFPNLSDWYTHLLSQSPSATIHLHVLSNILTANPDNVQHILNSNFHNYPKGKPFSSILGDLLGHGIFNVDGPSWLFQRKMASLELGSLSVRSHAFHIATAQIRSRLLPLLSSVAHTKDVLDLQDVFRRFSFDNICRFSFGLDPGCLTLSMPISEFAVAFDLASRLSAERALAASPVMWRIKRVLRLGSERKLREAIKMVDGLAMEVIRQRRQIGFSHRNDLLSRFMASTDDDRYLRDIVVSFLLAGRDTVASALTSLFWLLSQNPEVESEILSESDRVMGPDRDAVPSFENLRDMHYLHAAVYENMRLFPPVQFDSKFAEEDDILPDGTFVQKGTRVTYHPYAMGRMDRIWGPDCLQFKPERWLKNGCFAPENPFKFPVFQAGLRVCLGKELAVMDVKCVAVALIRKFKVLLDGTDGVARFAPGLTASWRGGLPVRIEERTTC | 501 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 24549545 | 24551805 | + | Lag0025939.1 | Lac10g1894 | 584425 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lac10g1894 | 501 | Gene3D | Cytochrome P450 | 57 | 500 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Lac10g1894 | 501 | SUPERFAMILY | Cytochrome P450 | 61 | 498 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Lac10g1894 | 501 | PRINTS | E-class P450 group I signature | 312 | 338 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Lac10g1894 | 501 | PRINTS | E-class P450 group I signature | 445 | 468 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Lac10g1894 | 501 | PRINTS | E-class P450 group I signature | 435 | 445 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Lac10g1894 | 501 | PRINTS | E-class P450 group I signature | 292 | 309 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Lac10g1894 | 501 | PRINTS | P450 superfamily signature | 303 | 320 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Lac10g1894 | 501 | PRINTS | P450 superfamily signature | 436 | 445 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Lac10g1894 | 501 | PRINTS | P450 superfamily signature | 358 | 369 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Lac10g1894 | 501 | PRINTS | P450 superfamily signature | 445 | 456 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Lac10g1894 | 501 | Pfam | Cytochrome P450 | 85 | 473 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Lac10g1894 | 501 | PANTHER | CYTOCHROME P450 | 40 | 473 | - | - | |
Lac10g1894 | 501 | CDD | CYP86A | 87 | 491 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lac10g1894 | Lac-Chr10:24549545 | Lac10g2284 | Lac-Chr10:34921126 | 4.10E-103 | dispersed | |
Lac10g2876 | Lac-Chr10:43299498 | Lac10g1894 | Lac-Chr10:24549545 | 3.50E-79 | transposed | |
Lac10g2877 | Lac-Chr10:43301779 | Lac10g1894 | Lac-Chr10:24549545 | 4.40E-84 | transposed | |
Lac10g1894 | Lac-Chr10:24549545 | Lac6g1554 | Lac-Chr6:20479972 | 2.10E-30 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lac10g1894 | K20624 | - | csv:101207724 | 847.04 |