Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac10g2035 ATGGAAGTGTTAGAGGTTAAAGCCGATGGAACAGTATCCACTAGGAAGATTAACAGACGCCAGCTGTTGAAGTCAAGTGGGCTTCGTCCACGTGATGTCCGAAGTGTTGATCCATCTTTATTTTTGACAAACTCAATGCCTACATTACTGGTCCGTGAACATGCTATTTTGCTTAATCTGGGTTCGTTGCGAGCAATAGCTATGCAGGATTGTGTCCTCATATTTGATTATAACCGTCCAGGAGGACAAGCTTTTATTGAATCATTGTTGCCTCGATTGAACCCTAAAAACATGAACGGAGTGCCAGCAATGCCATTTGAACTTGAGGTTGTTGAAGCTGCATTGCTTTCACGAACTCAGCGTTTGGAGCAGCGACTAATGAAAGTAGAACCTCGTGTTCAAGCTCTACTTGAGGTATTGCCCAACAAATTAACTGCAGATGTGTTGGAACAACTTCGTATTAGCAAGCAGACTTTGGTTGAATTAGGTTCCAGGGCAGGGGCTCTCAGACAAATGCTTCTTGATCTTCTGGAGGATCCGCAAGAAATACGACGCATCTGTATTATGGGAAGAAATTGTACGCTTAATAAAAGAAATGATGATGTGGAGTGCTCTCTTCCTTTGGATAAGCAGATTGCTGATGAAGAGGAGGAAGAAATAGAAATGCTGTTGGAAAATTATCTTCAGAGATGCGAATCTTGTCATGGTCAGGCTGAAAGGCTTCTGGATTCTGCAAAAGAAATGGAAGATTCAATTGCCGTCAATTTGAGCTCGCGGCGACTGGAAGTTAGCAGAGTGGAATTGCTTCTCCAAGTTGGGACATTTTGTGTAGCAGTTGGTGCTTTAGTTGCAGATAATGGGAGGATCATGGGCTTATATGGAAGGACAAGTATCTCCATTGGTATGAGGCCTTTTGGGGTGAACCAAAAGCAAAGCCATGAGGGCTTATGCCCAAAGTGGACAATATCATACAATTGTGGAGATCTGTGTCGTGTCTGGTAG 1002 43.31 MEVLEVKADGTVSTRKINRRQLLKSSGLRPRDVRSVDPSLFLTNSMPTLLVREHAILLNLGSLRAIAMQDCVLIFDYNRPGGQAFIESLLPRLNPKNMNGVPAMPFELEVVEAALLSRTQRLEQRLMKVEPRVQALLEVLPNKLTADVLEQLRISKQTLVELGSRAGALRQMLLDLLEDPQEIRRICIMGRNCTLNKRNDDVECSLPLDKQIADEEEEEIEMLLENYLQRCESCHGQAERLLDSAKEMEDSIAVNLSSRRLEVSRVELLLQVGTFCVAVGALVADNGRIMGLYGRTSISIGMRPFGVNQKQSHEGLCPKWTISYNCGDLCRVW 333
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 28802415 28833874 + Lag0026080.1 Lac10g2035 584566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac10g2035 333 Pfam Magnesium transporter MRS2-like 6 260 - -
Lac10g2035 333 Gene3D - 1 77 - -
Lac10g2035 333 FunFam Magnesium transporter MRS2-11, chloroplastic 1 77 - -
Lac10g2035 333 Coils Coil 210 230 - -
Lac10g2035 333 FunFam Magnesium transporter MRS2-11, chloroplastic 79 261 - -
Lac10g2035 333 CDD Mrs2_Mfm1p-like 3 294 IPR039204 -
Lac10g2035 333 Gene3D Magnesium transport protein CorA, transmembrane region 80 261 - -
Lac10g2035 333 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 4 284 IPR039204 GO:0009941(PANTHER)|GO:0015095(PANTHER)|GO:0015693(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac10g2035 Lac-Chr10:28802415 Lac3g1744 Lac-Chr3:17848055 3.90E-17 dispersed
Lac10g2035 Lac-Chr10:28802415 Lac8g0551 Lac-Chr8:8207828 5.20E-14 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac10g2035 K16075 - csv:101219314 517.694