Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lac10g2264 | ATGGCGAGAGGTTCAGCAGCTGCTGAGTTTTCAGCTCAAGCTATTCCTGGATTCTTGCGAACATCATGTTCCACAAGAAGTCCTGCGGATGCATTAATGGAAGCATTTGTAAAAACAGATATTGAATTTAGAAAAGAACTTGAATTCTTTCGCAAATCCAAGAAAGTTAAACAGAAAGACTGGCATCCTGGTTGCACTGCTGTTGTTGCTCTAATTGTTAGGGACAGGCTTTTTGTTGCCAATGCTGGTGATTGTAGGACAATATTGTGTCAGGCTGGCGATCCCATTGTTTTAAGCAAGGATCATGTTGCTAGTTGTCTCGAGGAGCGAGAACGTGTCATCAGTGCTGGAGGACAGGTCAAGTGGCAAGTTGATACATGGAGGGTTGGTCCAGCCGCTCTTCAGGTGACTCGATCAATTGGCGACGATGATTTGAAGCCAGCGGTGACTGCAGAACCCGAGATAAGAGAAACTGTTTTGACATCACAGGATGATTACCTGGTTATGGCTAGTGATGGACTATGGGATGTCCTCAGCAACTCTGAGGTAGTTGGGATAATCAGGGACACTGTTAAAGAACCAGGAATGTGCTCGAAGCGACTAGCAACGGAAGCTGCAGCTCGGGGCAGTAACGATAACATCACAGTAATTGTTGTATTTTTGCATCCAGTATCTACAGTAGAGAGAATTTATTAA | 696 | 44.68 | MARGSAAAEFSAQAIPGFLRTSCSTRSPADALMEAFVKTDIEFRKELEFFRKSKKVKQKDWHPGCTAVVALIVRDRLFVANAGDCRTILCQAGDPIVLSKDHVASCLEERERVISAGGQVKWQVDTWRVGPAALQVTRSIGDDDLKPAVTAEPEIRETVLTSQDDYLVMASDGLWDVLSNSEVVGIIRDTVKEPGMCSKRLATEAAARGSNDNITVIVVFLHPVSTVERIY | 231 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 34333179 | 34335923 | + | Lag0026309.1 | Lac10g2264 | 584795 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lac10g2264 | 231 | PANTHER | PROTEIN PHOSPHATASE | 4 | 220 | IPR015655 | GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0035970(PANTHER) | |
Lac10g2264 | 231 | FunFam | Leucine rich repeat protein phosphatase 2c domain containing protein | 2 | 225 | - | - | |
Lac10g2264 | 231 | Pfam | Protein phosphatase 2C | 3 | 214 | IPR001932 | - | |
Lac10g2264 | 231 | SMART | PP2C_4 | 1 | 219 | IPR001932 | - | |
Lac10g2264 | 231 | SUPERFAMILY | PP2C-like | 4 | 223 | IPR036457 | - | |
Lac10g2264 | 231 | SMART | PP2C_SIG_2 | 1 | 221 | IPR001932 | - | |
Lac10g2264 | 231 | CDD | PP2Cc | 4 | 221 | IPR001932 | - | |
Lac10g2264 | 231 | Gene3D | - | 1 | 226 | IPR036457 | - | |
Lac10g2264 | 231 | ProSiteProfiles | PPM-type phosphatase domain profile. | 1 | 221 | IPR001932 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lac10g2264 | Lac-Chr10:34333179 | Lac2g0519 | Lac-Chr2:3855998 | 2.40E-34 | dispersed | |
Lac10g2264 | Lac-Chr10:34333179 | Lac7g2763 | Lac-Chr7:46777990 | 8.60E-24 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lac10g2264 | - | - | - | 0.0 |