Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac10g2264 ATGGCGAGAGGTTCAGCAGCTGCTGAGTTTTCAGCTCAAGCTATTCCTGGATTCTTGCGAACATCATGTTCCACAAGAAGTCCTGCGGATGCATTAATGGAAGCATTTGTAAAAACAGATATTGAATTTAGAAAAGAACTTGAATTCTTTCGCAAATCCAAGAAAGTTAAACAGAAAGACTGGCATCCTGGTTGCACTGCTGTTGTTGCTCTAATTGTTAGGGACAGGCTTTTTGTTGCCAATGCTGGTGATTGTAGGACAATATTGTGTCAGGCTGGCGATCCCATTGTTTTAAGCAAGGATCATGTTGCTAGTTGTCTCGAGGAGCGAGAACGTGTCATCAGTGCTGGAGGACAGGTCAAGTGGCAAGTTGATACATGGAGGGTTGGTCCAGCCGCTCTTCAGGTGACTCGATCAATTGGCGACGATGATTTGAAGCCAGCGGTGACTGCAGAACCCGAGATAAGAGAAACTGTTTTGACATCACAGGATGATTACCTGGTTATGGCTAGTGATGGACTATGGGATGTCCTCAGCAACTCTGAGGTAGTTGGGATAATCAGGGACACTGTTAAAGAACCAGGAATGTGCTCGAAGCGACTAGCAACGGAAGCTGCAGCTCGGGGCAGTAACGATAACATCACAGTAATTGTTGTATTTTTGCATCCAGTATCTACAGTAGAGAGAATTTATTAA 696 44.68 MARGSAAAEFSAQAIPGFLRTSCSTRSPADALMEAFVKTDIEFRKELEFFRKSKKVKQKDWHPGCTAVVALIVRDRLFVANAGDCRTILCQAGDPIVLSKDHVASCLEERERVISAGGQVKWQVDTWRVGPAALQVTRSIGDDDLKPAVTAEPEIRETVLTSQDDYLVMASDGLWDVLSNSEVVGIIRDTVKEPGMCSKRLATEAAARGSNDNITVIVVFLHPVSTVERIY 231
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 34333179 34335923 + Lag0026309.1 Lac10g2264 584795
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac10g2264 231 PANTHER PROTEIN PHOSPHATASE 4 220 IPR015655 GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Lac10g2264 231 FunFam Leucine rich repeat protein phosphatase 2c domain containing protein 2 225 - -
Lac10g2264 231 Pfam Protein phosphatase 2C 3 214 IPR001932 -
Lac10g2264 231 SMART PP2C_4 1 219 IPR001932 -
Lac10g2264 231 SUPERFAMILY PP2C-like 4 223 IPR036457 -
Lac10g2264 231 SMART PP2C_SIG_2 1 221 IPR001932 -
Lac10g2264 231 CDD PP2Cc 4 221 IPR001932 -
Lac10g2264 231 Gene3D - 1 226 IPR036457 -
Lac10g2264 231 ProSiteProfiles PPM-type phosphatase domain profile. 1 221 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac10g2264 Lac-Chr10:34333179 Lac2g0519 Lac-Chr2:3855998 2.40E-34 dispersed
Lac10g2264 Lac-Chr10:34333179 Lac7g2763 Lac-Chr7:46777990 8.60E-24 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac10g2264 - - - 0.0